Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 2.9e-112 408.7 226 100.0
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 3.3e-39 166.0 167 63.5
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.9e-35 152.9 165 60.0
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.1e-34 151.0 179 57.0
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.4e-34 150.6 182 53.3
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.4e-34 150.6 163 57.7
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 3.2e-34 149.4 184 49.5
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 5.5e-34 148.7 178 54.5
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 5.5e-34 148.7 154 58.4
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 6.1e-33 145.2 174 54.6
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.0e-32 144.4 150 59.3
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 1.0e-32 144.4 150 59.3
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.4e-32 144.1 148 60.1
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.8e-32 143.7 148 59.5
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.3e-32 143.3 172 52.9
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 3.9e-32 142.5 192 52.1
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.9e-32 142.5 149 59.7
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 3.9e-32 142.5 154 57.1
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 6.7e-32 141.7 183 54.6
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 1.1e-31 141.0 182 51.1
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 1.5e-31 140.6 159 55.3
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.5e-31 140.6 150 60.0
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.0e-31 140.2 172 50.6
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 2.0e-31 140.2 160 56.2
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 2.0e-31 140.2 157 55.4
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 2.6e-31 139.8 174 51.7
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.6e-31 139.8 155 58.7
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 2.6e-31 139.8 188 48.4
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 3.3e-31 139.4 152 55.9
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 4.4e-31 139.0 164 54.9
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.7e-31 138.7 169 55.0
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 7.4e-31 138.3 185 51.9
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 1.7e-30 137.1 149 54.4
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 2.2e-30 136.7 138 62.3
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 2.8e-30 136.3 184 49.5
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 4.8e-30 135.6 178 49.4
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 4.8e-30 135.6 149 57.7
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 8.2e-30 134.8 175 50.3
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.1e-29 134.4 158 55.7
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 1.1e-29 134.4 147 54.4
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 1.1e-29 134.4 184 48.4
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.4e-29 134.0 181 49.7
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 1.4e-29 134.0 182 47.8
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.4e-29 134.0 185 53.0
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 1.8e-29 133.7 183 47.0
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.4e-29 133.3 175 52.6
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 2.4e-29 133.3 178 48.9
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 2.4e-29 133.3 185 50.3
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 7.0e-29 131.7 169 50.3
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 7.0e-29 131.7 189 48.1
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.1e-29 131.3 150 53.3
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 9.1e-29 131.3 174 51.1
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 1.2e-28 131.0 181 50.8
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.6e-28 129.8 166 53.0
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 2.6e-28 129.8 148 54.7
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 3.5e-28 129.4 164 53.0
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 3.5e-28 129.4 181 48.1
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 5.9e-28 128.6 179 47.5
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 7.7e-28 128.3 182 51.1
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 7.7e-28 128.3 189 49.2
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.7e-27 127.1 117 63.2
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.7e-27 127.1 186 47.3
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.9e-27 126.3 147 52.4
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 3.8e-27 125.9 172 48.3
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 5.0e-27 125.6 153 51.6
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 5.0e-27 125.6 177 45.2
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 6.5e-27 125.2 185 49.2
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 6.5e-27 125.2 151 52.3
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 8.5e-27 124.8 148 54.1
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.1e-26 124.4 176 48.3
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.1e-26 124.4 150 54.0
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.9e-26 123.6 161 49.7
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.9e-26 123.6 182 45.6
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 2.5e-26 123.2 181 45.9
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 3.2e-26 122.9 156 51.3
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 4.2e-26 122.5 150 50.7
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 5.5e-26 122.1 183 45.4
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 9.4e-26 121.3 174 47.1
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 1.6e-25 120.6 156 47.4
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 1.6e-25 120.6 177 46.9
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 1.6e-25 120.6 174 50.0
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 1.6e-25 120.6 177 46.9
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 2.1e-25 120.2 193 43.5
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 2.1e-25 120.2 161 50.9
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 2.1e-25 120.2 183 46.4
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 2.7e-25 119.8 173 46.8
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 6.1e-25 118.6 152 50.7
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 6.1e-25 118.6 165 49.7
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 6.1e-25 118.6 147 51.0
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 1.4e-24 117.5 149 47.0
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 3.0e-24 116.3 166 47.6
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 3.0e-24 116.3 185 43.2
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.0e-24 115.9 170 47.1
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 6.7e-24 115.2 170 45.9
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 8.8e-24 114.8 173 47.4
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.1e-23 114.4 128 57.0
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.5e-23 114.0 148 51.4
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.5e-23 114.0 186 43.5
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.0e-23 113.6 169 49.1
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 2.6e-23 113.2 161 48.4
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 2.6e-23 113.2 138 53.6
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 2.6e-23 113.2 152 50.7
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 3.3e-23 112.8 169 45.6
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 7.5e-23 111.7 143 51.0
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 7.5e-23 111.7 156 46.8
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 1.7e-22 110.5 97 70.1
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 2.2e-22 110.2 148 50.7
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 2.8e-22 109.8 177 45.2
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 2.8e-22 109.8 177 45.2
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 2.8e-22 109.8 177 45.2
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.8e-22 109.8 148 50.0
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 6.3e-22 108.6 150 50.7
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.1e-21 107.8 148 50.0
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.4e-21 107.5 135 49.6
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.1e-21 105.9 170 46.5
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 7.0e-21 105.1 185 42.2
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.6e-20 104.0 182 42.3
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 3.5e-20 102.8 155 47.1
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 5.9e-20 102.1 148 50.7
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 3.8e-19 99.4 148 46.6
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.9e-18 97.1 117 51.3
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 4.2e-18 95.9 161 44.7
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 4.2e-18 95.9 177 44.1
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 9.4e-18 94.7 110 53.6
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 8.0e-17 91.7 169 43.8
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.8e-16 90.5 149 45.6
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.0e-15 87.0 151 46.4
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 4.4e-15 85.9 104 54.8
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.7e-14 84.0 84 61.9
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 2.4e-13 80.1 83 62.7
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 5.4e-13 79.0 111 48.6
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 4.5e-12 75.9 151 43.0
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 4.5e-12 75.9 110 43.6
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 7.7e-12 75.1 179 35.8
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 8.5e-11 71.6 99 43.4
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 7.2e-10 68.6 180 33.3
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 4.0e-08 62.8 65 61.5
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 8.8e-08 61.6 69 50.7
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 1.5e-07 60.8 67 43.3
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 3.4e-07 59.7 78 47.4
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 3.4e-07 59.7 105 34.3
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 5.7e-07 58.9 121 36.4


User provided reference genes

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