Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02079 Beta vulgaris HOM05D003281 ORTHO05D004128 5.7e-124 447.6 223 100.0
EL10Ac1g01790 Beta vulgaris HOM05D003281 ORTHO05D004128 6.8e-61 238.0 149 81.2
EL10Ac1g01734 Beta vulgaris HOM05D003281 ORTHO05D004128 2.3e-24 116.7 57 96.5
EL10Ac5g10906 Beta vulgaris HOM05D003281 ORTHO05D004128 1.9e-23 113.6 57 93.0
AUR62015011 Chenopodium quinoa HOM05D003281 ORTHO05D004128 1.8e-21 107.1 57 84.2
AUR62034379 Chenopodium quinoa HOM05D003281 ORTHO05D004128 6.9e-21 105.1 57 82.5
THA.LOC104798558 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 1.2e-20 104.4 73 69.9
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.4e-20 102.8 73 68.5
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 3.4e-20 102.8 73 68.5
Manes.08G044300 Manihot esculenta HOM05D003281 ORTHO05D004128 4.5e-20 102.4 57 82.5
Ah.01g022040 Amaranthus hybridus HOM05D003281 ORTHO05D004128 5.8e-20 102.1 57 84.2
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 7.6e-20 101.7 69 66.7
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 9.9e-20 101.3 73 67.1
Dinv18011 Davidia involucrata HOM05D003281 ORTHO05D004128 9.9e-20 101.3 57 80.7
AL4G31070 Arabidopsis lyrata HOM05D003281 ORTHO05D004128 1.3e-19 100.9 57 78.9
BcaB02g09485 Brassica carinata HOM05D003281 ORTHO05D004128 1.3e-19 100.9 73 67.1
BcaC02g11585 Brassica carinata HOM05D003281 ORTHO05D004128 1.3e-19 100.9 73 67.1
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 1.3e-19 100.9 73 67.1
CARHR129210 Cardamine hirsuta HOM05D003281 ORTHO05D004128 1.3e-19 100.9 73 67.1
Thhalv10016407m.g Eutrema salsugineum HOM05D003281 ORTHO05D004128 1.3e-19 100.9 73 67.1
TWI34G0807 Tripterygium wilfordii HOM05D003281 ORTHO05D004128 1.3e-19 100.9 57 80.7
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 1.7e-19 100.5 57 78.9
Carub.0004s1674 Capsella rubella HOM05D003281 ORTHO05D004128 2.2e-19 100.1 57 78.9
Ciclev10014669m.g Citrus clementina HOM05D003281 ORTHO05D004128 2.2e-19 100.1 57 78.9
Atru.chr10.431 Acer truncatum HOM05D003281 ORTHO05D004128 2.9e-19 99.8 57 78.9
AT2G35040 Arabidopsis thaliana HOM05D003281 ORTHO05D004128 2.9e-19 99.8 73 67.1
Dinv01965 Davidia involucrata HOM05D003281 ORTHO05D004128 2.9e-19 99.8 57 78.9
Hund10057 Selenicereus undatus HOM05D003281 ORTHO05D004128 2.9e-19 99.8 57 80.7
CANSAT56G2301 Cannabis sativa HOM05D003281 ORTHO05D004128 3.8e-19 99.4 58 75.9
CANSAT56G3182 Cannabis sativa HOM05D003281 ORTHO05D004128 3.8e-19 99.4 58 75.9
Duzib132G1085 Durio zibethinus HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
Duzib248G1352 Durio zibethinus HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
ECA232G1899 Erigeron canadensis HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 77.2
Gohir.A01G124000 Gossypium hirsutum HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
Gohir.A12G048600 Gossypium hirsutum HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
Gorai.008G050100 Gossypium raimondii HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
HanXRQChr13g0406911 Helianthus annuus HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
THA.LOC104814352 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 3.8e-19 99.4 73 68.5
TAR626G1141 Trochodendron aralioides HOM05D003281 ORTHO05D004128 3.8e-19 99.4 57 78.9
Nitab4.5_0000443g0070 Nicotiana tabacum HOM05D003281 ORTHO05D004128 6.4e-19 98.6 57 77.2
Peaxi162Scf00199g00516 Petunia axillaris HOM05D003281 ORTHO05D004128 6.4e-19 98.6 57 77.2
GSVIVG01012120001 Vitis vinifera HOM05D003281 ORTHO05D004128 6.4e-19 98.6 57 78.9
MSTRG.16470 Avicennia marina HOM05D003281 ORTHO05D004128 8.4e-19 98.2 141 44.7
CAN.G514.6 Capsicum annuum HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 77.2
ClCG03G004230 Citrullus lanatus HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 77.2
COL.COLO4_17637 Corchorus olitorius HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 78.9
MELO3C002406.2 Cucumis melo HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 77.2
CsaV3_1G010170 Cucumis sativus L. HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 77.2
MD12G1033700 Malus domestica HOM05D003281 ORTHO05D004128 8.4e-19 98.2 55 80.0
MD14G1035300 Malus domestica HOM05D003281 ORTHO05D004128 8.4e-19 98.2 55 80.0
Nn7g38195 Nelumbo nucifera HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 77.2
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 8.4e-19 98.2 57 75.4
Aqoxy5G04041 Aquilegia oxysepala HOM05D003281 ORTHO05D004128 1.1e-18 97.8 55 80.0
Gohir.D01G111800 Gossypium hirsutum HOM05D003281 ORTHO05D004128 1.1e-18 97.8 57 77.2
Gorai.002G136700 Gossypium raimondii HOM05D003281 ORTHO05D004128 1.1e-18 97.8 57 77.2
CiPaw.10G062800 Carya illinoinensis HOM05D003281 ORTHO05D004128 1.4e-18 97.4 69 63.8
Gohir.D12G047400 Gossypium hirsutum HOM05D003281 ORTHO05D004128 1.4e-18 97.4 57 77.2
Sc26g0004530 Simmondsia chinensis HOM05D003281 ORTHO05D004128 1.4e-18 97.4 57 77.2
Thecc.02G006200 Theobroma cacao HOM05D003281 ORTHO05D004128 1.4e-18 97.4 57 78.9
Nitab4.5_0006246g0040 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.9e-18 97.1 57 77.2
A04p28850 Brassica napus HOM05D003281 ORTHO05D004128 2.4e-18 96.7 57 73.7
BraA09t41745Z Brassica rapa HOM05D003281 ORTHO05D004128 2.4e-18 96.7 57 73.7
Sed0004438 Sechium edule HOM05D003281 ORTHO05D004128 2.4e-18 96.7 57 77.2
Solyc08g075160.3 Solanum lycopersicum HOM05D003281 ORTHO05D004128 3.2e-18 96.3 57 75.4
PGSC0003DMG400020817 Solanum tuberosum HOM05D003281 ORTHO05D004128 3.2e-18 96.3 57 75.4
Potri.010G114400 Populus trichocarpa HOM05D003281 ORTHO05D004128 4.2e-18 95.9 57 73.7
Sopen08g023790 Solanum pennellii HOM05D003281 ORTHO05D004128 4.2e-18 95.9 57 73.7
Cpa.g.sc30.140 Carica papaya HOM05D003281 ORTHO05D004128 5.5e-18 95.5 57 77.2
Ca_18076_v3 Cicer arietinum L. HOM05D003281 ORTHO05D004128 5.5e-18 95.5 57 75.4
Actinidia11434 Actinidia chinensis HOM05D003281 ORTHO05D004128 7.1e-18 95.1 57 75.4
Hma1.2p1_0181F.1_g079910 Hydrangea macrophylla HOM05D003281 ORTHO05D004128 7.1e-18 95.1 57 73.7
SGA_v2.0_scaffold254G45247 Striga asiatica HOM05D003281 ORTHO05D004128 7.1e-18 95.1 57 75.4
FAN15G0156 Fragaria x ananassa HOM05D003281 ORTHO05D004128 9.3e-18 94.7 55 76.4
FAN26G3221 Fragaria x ananassa HOM05D003281 ORTHO05D004128 9.3e-18 94.7 55 76.4
QL11p013631 Quercus lobata HOM05D003281 ORTHO05D004128 1.2e-17 94.4 57 73.7
RcHm_v2.0_Chr2g0124681 Rosa chinensis HOM05D003281 ORTHO05D004128 1.2e-17 94.4 55 76.4
Eucgr.A00708 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.6e-17 94.0 57 73.7
Phvul.005G018700 Phaseolus vulgaris HOM05D003281 ORTHO05D004128 1.6e-17 94.0 57 73.7
Prupe.5G007600 Prunus persica HOM05D003281 ORTHO05D004128 1.6e-17 94.0 55 78.2
SGA_v2.0_scaffold202G41492 Striga asiatica HOM05D003281 ORTHO05D004128 1.6e-17 94.0 57 73.7
SGA_v2.0_scaffold6G03254 Striga asiatica HOM05D003281 ORTHO05D004128 1.6e-17 94.0 57 73.7
FvH4_1g24580 Fragaria vesca HOM05D003281 ORTHO05D004128 2.1e-17 93.6 55 76.4
FAN23G2047 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.1e-17 93.6 55 76.4
unitig_48.g30290 Utricularia gibba HOM05D003281 ORTHO05D004128 2.1e-17 93.6 58 77.6
Eucgr.A00733 Eucalyptus grandis HOM05D003281 ORTHO05D004128 2.7e-17 93.2 57 73.7
Lsat_1_v5_gn_4_97540 Lactuca sativa HOM05D003281 ORTHO05D004128 2.7e-17 93.2 56 75.0
SalBow1G2706 Salvia bowleyana HOM05D003281 ORTHO05D004128 2.7e-17 93.2 57 73.7
SalBow1G7114 Salvia bowleyana HOM05D003281 ORTHO05D004128 2.7e-17 93.2 57 73.7
RcHm_v2.0_Chr1g0326741 Rosa chinensis HOM05D003281 ORTHO05D004128 3.5e-17 92.8 55 76.4
VMungo1080G1879 Vigna mungo HOM05D003281 ORTHO05D004128 3.5e-17 92.8 57 71.9
arahy.Tifrunner.gnm1.ann1.D0LQY1 Arachis hypogaea HOM05D003281 ORTHO05D004128 4.6e-17 92.4 57 73.7
arahy.Tifrunner.gnm1.ann1.F6IBWZ Arachis hypogaea HOM05D003281 ORTHO05D004128 4.6e-17 92.4 57 73.7
Os08g0206600 Oryza sativa ssp. japonica HOM05D003281 ORTHO05D004128 4.6e-17 92.4 58 70.7
FAN19G0112 Fragaria x ananassa HOM05D003281 ORTHO05D004128 6.0e-17 92.0 55 74.5
Lj3g0002589 Lotus japonicus HOM05D003281 ORTHO05D004128 7.9e-17 91.7 57 70.2
FvH4_7g04800 Fragaria vesca HOM05D003281 ORTHO05D004128 1.0e-16 91.3 55 74.5
FAN06G1854 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.0e-16 91.3 55 74.5
FAN06G3868 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.0e-16 91.3 55 74.5
Cc02_g28610 Coffea canephora HOM05D003281 ORTHO05D004128 1.3e-16 90.9 71 63.4
Glyma.04G133100 Glycine max HOM05D003281 ORTHO05D004128 1.3e-16 90.9 57 71.9
MBI14_g44727_MAGBIO Magnolia biondii HOM05D003281 ORTHO05D004128 1.3e-16 90.9 59 71.2
unitig_46.g18375 Utricularia gibba HOM05D003281 ORTHO05D004128 1.3e-16 90.9 56 76.8
Glyma.11G158400 Glycine max HOM05D003281 ORTHO05D004128 1.8e-16 90.5 57 70.2
Lalb_Chr07g0189731 Lupinus albus HOM05D003281 ORTHO05D004128 3.9e-16 89.4 57 70.2
Cc02_g09680 Coffea canephora HOM05D003281 ORTHO05D004128 5.1e-16 89.0 55 70.9
Migut.B00724 Erythranthe guttata HOM05D003281 ORTHO05D004128 6.7e-16 88.6 139 41.7
Psat5g222920 Pisum sativum HOM05D003281 ORTHO05D004128 6.7e-16 88.6 57 73.7
Zm00001eb070920 Zea mays HOM05D003281 ORTHO05D004128 6.7e-16 88.6 58 69.0
SHI29159 Sapria himalayana HOM05D003281 ORTHO05D000001 8.7e-16 88.2 56 69.6
DCAR_001294 Daucus carota HOM05D003281 ORTHO05D004128 1.1e-15 87.8 57 70.2
PGR004G1969 Punica granatum HOM05D003281 ORTHO05D004128 1.1e-15 87.8 57 66.7
Zm00001eb413740 Zea mays HOM05D003281 ORTHO05D004128 1.1e-15 87.8 55 70.9
TPR.G1398 Trifolium pratense HOM05D003281 ORTHO05D004128 1.5e-15 87.4 57 71.9
TPR.G6549 Trifolium pratense HOM05D003281 ORTHO05D004128 1.5e-15 87.4 57 71.9
ATR0150G008 Amborella trichopoda HOM05D003281 ORTHO05D004128 1.9e-15 87.0 57 70.2
Psat5g186600 Pisum sativum HOM05D003281 ORTHO05D004128 1.9e-15 87.0 57 71.9
Cc01_g05380 Coffea canephora HOM05D003281 ORTHO05D004128 2.5e-15 86.7 71 59.2
PSO017G0093 Papaver somniferum HOM05D003281 ORTHO05D004128 2.5e-15 86.7 57 68.4
HPP92_009463 Vanilla planifolia HOM05D003281 ORTHO05D004128 2.5e-15 86.7 59 62.7
Medtr5g095820 Medicago truncatula HOM05D003281 ORTHO05D004128 3.3e-15 86.3 57 70.2
Eucgr.A00699 Eucalyptus grandis HOM05D003281 ORTHO05D004128 5.6e-15 85.5 57 68.4
PSO675G6428 Papaver somniferum HOM05D003281 ORTHO05D004128 5.6e-15 85.5 57 68.4
Medtr3g013710 Medicago truncatula HOM05D003281 ORTHO05D004128 7.4e-15 85.1 57 70.2
Lj2A344T44 Lonicera japonica HOM05D003281 ORTHO05D004128 2.1e-14 83.6 56 69.6
CBR_g50928 Chara braunii HOM05D003281 ORTHO05D004128 6.2e-14 82.0 60 63.3
Rhsim04G0089900 Rhododendron simsii HOM05D003281 ORTHO05D004128 6.2e-14 82.0 56 71.4
BcaC04g19802 Brassica carinata HOM05D003281 ORTHO05D004128 1.1e-13 81.3 80 55.0
BcaC04g19805 Brassica carinata HOM05D003281 ORTHO05D004128 1.1e-13 81.3 60 66.7
C09p51540 Brassica napus HOM05D003281 ORTHO05D004128 1.1e-13 81.3 60 66.7
BolC9t58009H Brassica oleracea HOM05D003281 ORTHO05D004128 1.1e-13 81.3 60 66.7
BolC9t58011H Brassica oleracea HOM05D003281 ORTHO05D004128 1.1e-13 81.3 60 66.7
vmacro14667 Vaccinium macrocarpon HOM05D003281 ORTHO05D004128 1.8e-13 80.5 56 71.4
CDE06G0368 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 3.1e-13 79.7 60 58.3
CDE02G3604 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 9.0e-13 78.2 58 58.6
Cfa000681 Carpinus fangiana HOM05D003281 ORTHO05D004128 1.2e-12 77.8 51 70.6
SMO228G0099 Selaginella moellendorffii HOM05D003281 ORTHO05D004128 1.5e-12 77.4 62 61.3
A05p32240 Brassica napus HOM05D003281 ORTHO05D004128 2.6e-12 76.6 49 73.5
Rhsim01G0054700 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.6e-12 76.6 56 67.9
SEGI_14905 Sequoiadendron giganteum HOM05D003281 ORTHO05D004128 4.5e-12 75.9 56 62.5
unitig_46.g18364 Utricularia gibba HOM05D003281 ORTHO05D004128 4.5e-12 75.9 64 64.1
Mapoly0032s0021 Marchantia polymorpha HOM05D003281 ORTHO05D004128 5.8e-12 75.5 60 55.0
Pp3c12_24590 Physcomitrium patens HOM05D003281 ORTHO05D004128 1.0e-11 74.7 61 54.1
Pp3c4_1350 Physcomitrium patens HOM05D003281 ORTHO05D004128 2.9e-11 73.2 60 56.7
AagrBONN_evm.TU.Sc2ySwM_368.3406 Anthoceros agrestis HOM05D003281 ORTHO05D004128 2.5e-10 70.1 52 61.5
C09p51500 Brassica napus HOM05D003281 ORTHO05D004128 2.1e-09 67.0 79 48.1
FAN01G0101 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.1e-09 67.0 41 75.6
EL10Ac8g19825 Beta vulgaris HOM05D000134 ORTHO05D012257 7.9e-09 65.1 38 78.9
MCO04G009 Micromonas commoda HOM05D003281 ORTHO05D004128 5.1e-08 62.4 59 50.8
CSS0018694 Camellia sinensis var. sinensis HOM05D003281 ORTHO05D004128 2.5e-07 60.1 43 62.8
Rhsim04G0092800 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.5e-07 60.1 48 62.5
PRCOL_00001991 Prasinoderma coloniale HOM05D003281 ORTHO05D004128 3.3e-07 59.7 54 53.7
Rhsim04G0089200 Rhododendron simsii HOM05D003281 ORTHO05D004128 4.3e-07 59.3 48 68.8


User provided reference genes

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