Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 3.4e-43 177.9 90 100.0
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.8e-37 158.3 90 86.7
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 3.6e-37 157.9 90 85.6
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.1e-36 156.4 90 83.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.1e-36 156.4 90 83.3
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.8e-36 155.6 90 81.1
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.3e-36 155.2 90 82.2
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 3.1e-36 154.8 90 78.9
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 77.8
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 77.8
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 77.8
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 78.9
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 77.8
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.5e-35 152.5 90 77.8
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.5e-35 152.5 87 82.8
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 2.0e-35 152.1 90 78.9
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.0e-35 152.1 90 76.7
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 2.6e-35 151.8 90 77.8
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.6e-35 151.8 90 76.7
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 2.6e-35 151.8 90 75.6
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 76.7
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 81.1
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 81.1
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.3e-34 149.4 87 78.2
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.3e-34 149.4 87 78.2
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.3e-34 149.4 84 85.7
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.7e-34 149.1 87 79.3
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 2.2e-34 148.7 87 80.5
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 78.9
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 4.9e-34 147.5 86 80.2
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 6.4e-34 147.1 90 77.8
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 8.3e-34 146.7 88 79.5
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 74.4
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 78.9
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.9e-33 145.6 97 74.2
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 76.7
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 76.7
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 78.9
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 73.3
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 73.3
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 73.3
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 74.4
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 68.9
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 72.2
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 72.2
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 71.1
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 74.4
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 72.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 71.1
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 2.7e-32 141.7 91 75.8
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 2.7e-32 141.7 91 75.8
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 75.6
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 3.5e-32 141.4 87 74.7
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 4.6e-32 141.0 87 74.7
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 4.6e-32 141.0 90 73.3
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 4.6e-32 141.0 90 73.3
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 6.0e-32 140.6 91 75.8
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 75.6
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 74.4
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 72.2
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 72.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 71.1
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.3e-31 139.4 100 67.0
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 74.4
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.3e-31 138.7 87 72.4
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 71.6
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 73.3
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 3.0e-31 138.3 87 72.4
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 73.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 73.3
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 3.9e-31 137.9 89 71.9
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.9e-31 137.9 88 70.5
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 5.1e-31 137.5 88 69.3
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 70.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 68.2
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.6e-31 136.7 86 72.1
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 68.9
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.1e-30 136.3 88 69.3
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 67.8
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.1e-30 136.3 88 73.9
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 70.0
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.5e-30 136.0 94 72.3
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.9e-30 135.6 89 74.2
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 67.8
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 70.0
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 3.3e-30 134.8 87 71.3
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.2e-29 132.9 88 65.9
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.8e-29 131.7 89 73.0
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 68.9
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 89 69.7
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 124 57.3
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 1.4e-28 129.4 88 65.9
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.8e-28 129.0 86 66.3
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.6e-27 125.2 87 66.7
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 9.9e-27 123.2 90 65.6
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 4.9e-26 120.9 72 76.4
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.1e-25 119.8 86 67.4
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 1.4e-25 119.4 86 67.4
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 1.9e-25 119.0 84 63.1
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 3.2e-25 118.2 97 60.8
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.2e-24 116.3 70 72.9
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 3.5e-24 114.8 63 85.7
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.3e-23 112.1 69 72.5
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 6.6e-23 110.5 70 71.4
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 8.6e-23 110.2 70 70.0
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 5.6e-22 107.5 81 63.0
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 7.3e-22 107.1 63 76.2
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.8e-21 105.1 66 72.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 3.6e-21 104.8 71 71.8
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.8e-20 102.4 60 78.3
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 5.2e-20 100.9 57 80.7
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.8e-20 100.5 69 66.7
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 5.8e-19 97.4 58 74.1
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.7e-18 95.9 89 55.1
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.6e-16 89.4 71 62.0
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.1e-16 89.0 51 82.4
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 3.5e-16 88.2 77 57.1
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 5.6e-14 80.9 93 47.3
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 1.8e-12 75.9 90 47.8
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 1.7e-10 69.3 53 62.3
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.8e-10 68.2 47 72.3
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 7.3e-06 53.9 34 64.7
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 9.6e-06 53.5 41 63.4


User provided reference genes

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