Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 0.0e+00 1357.0 679 100.0
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 2.4e-210 736.1 674 61.1
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 4.4e-204 715.3 606 63.7
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 7.9e-177 624.8 685 52.0
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.3e-176 624.0 659 52.4
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.5e-175 620.5 627 55.3
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 7.4e-175 618.2 433 68.8
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 8.1e-174 614.8 631 54.5
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.1e-173 614.4 544 59.7
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 5.3e-173 612.1 543 57.8
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.9e-170 603.6 540 59.4
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 5.5e-170 602.1 539 58.4
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 7.1e-170 601.7 531 58.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 4.6e-169 599.0 533 58.7
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 7.9e-169 598.2 523 58.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.3e-168 597.4 469 63.1
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.8e-168 597.0 652 52.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.8e-168 597.0 455 65.9
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.0e-168 596.3 533 57.0
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 3.9e-168 595.9 492 60.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 8.7e-168 594.7 644 51.9
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.1e-167 594.3 523 57.9
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 1.5e-167 594.0 651 51.2
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 5.7e-167 592.0 444 65.1
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.4e-165 586.6 642 51.7
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 2.4e-165 586.6 617 52.2
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.0e-163 581.3 463 61.6
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 1.7e-163 580.5 423 65.2
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.8e-163 579.3 417 66.2
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.4e-162 577.4 562 55.7
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 5.5e-162 575.5 400 66.5
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.2e-161 574.3 452 63.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.7e-161 573.2 457 63.0
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.7e-161 573.2 450 62.2
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 6.1e-161 572.0 455 63.3
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 7.9e-161 571.6 527 56.4
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 7.9e-161 571.6 422 63.7
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.3e-160 570.9 450 62.0
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 1.5e-159 567.4 553 54.2
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.9e-159 567.0 496 58.9
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.3e-159 566.2 457 63.0
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 7.4e-159 565.1 527 56.2
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 9.7e-159 564.7 682 48.5
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.4e-157 560.8 409 66.0
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.8e-157 560.5 440 62.7
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 4.1e-157 559.3 443 62.5
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 6.9e-157 558.5 409 65.8
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.4e-156 556.2 650 48.9
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 2.9e-155 553.1 433 64.2
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.5e-154 550.1 457 59.7
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 7.2e-154 548.5 395 65.8
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 7.2e-154 548.5 429 62.7
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.6e-153 547.4 522 58.0
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.6e-153 545.8 409 65.3
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.8e-152 543.9 407 62.9
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.5e-151 540.8 432 62.7
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 5.7e-151 538.9 429 61.5
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 5.7e-151 538.9 456 59.9
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.6e-148 530.0 446 59.4
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 5.0e-147 525.8 581 50.1
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.3e-144 516.9 580 49.3
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.9e-144 516.2 677 45.8
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.4e-141 507.7 477 53.5
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.9e-138 497.3 555 49.9
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 9.4e-138 495.0 545 49.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 6.7e-136 488.8 420 59.0
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.1e-133 479.6 346 68.2
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.5e-119 434.5 366 58.7
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.3e-107 394.8 417 46.8
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 3.6e-105 386.7 416 49.5
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 5.8e-103 379.4 287 65.5
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.8e-95 352.8 237 69.6
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 4.4e-87 326.6 245 64.9
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 7.6e-79 299.3 469 41.8
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 7.8e-76 289.3 265 59.6
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.3e-75 287.7 268 54.9
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 9.0e-72 275.8 450 41.6
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 2.2e-70 271.2 388 42.0
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.1e-64 252.3 263 50.2
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 6.3e-49 199.9 192 50.0
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 9.7e-34 149.4 143 56.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.4e-29 135.6 484 27.3
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 2.5e-29 134.8 130 47.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 5.1e-27 127.1 81 65.4
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 6.5e-22 110.2 133 45.9
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 1.1e-21 109.4 97 59.8
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 1.5e-18 99.0 126 47.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 3.6e-12 77.8 49 69.4
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 6.1e-12 77.0 78 50.0
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 5.2e-11 73.9 179 33.5
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 6.8e-11 73.6 165 30.9
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 1.2e-10 72.8 193 30.6
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 4.8e-09 67.4 57 57.9
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.4e-08 65.9 102 41.2
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 1.3e-06 59.3 171 31.0


User provided reference genes

Program Settings