Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 7.5e-55 217.2 134 100.0
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 2.9e-38 162.2 127 78.7
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 2.7e-36 155.6 132 75.8
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.1e-33 146.0 136 61.8
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 2.8e-33 145.6 130 63.8
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 6.2e-33 144.4 136 61.0
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 8.0e-33 144.1 125 61.6
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 8.0e-33 144.1 135 65.2
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 1.0e-32 143.7 122 63.1
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.8e-32 142.9 126 73.8
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 2.3e-32 142.5 143 58.7
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 3.1e-32 142.1 122 69.7
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.0e-32 141.7 123 64.2
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.0e-32 141.7 123 64.2
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 5.2e-32 141.4 123 63.4
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 5.2e-32 141.4 126 63.5
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 8.9e-32 140.6 115 66.1
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.2e-31 140.2 119 65.5
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 1.5e-31 139.8 116 63.8
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 1.5e-31 139.8 129 63.6
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 2.0e-31 139.4 130 63.8
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 2.6e-31 139.0 115 64.3
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 3.4e-31 138.7 114 64.9
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 5.8e-31 137.9 123 71.5
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 9.8e-31 137.1 118 74.6
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 9.8e-31 137.1 115 63.5
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.3e-30 136.7 120 64.2
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.3e-30 136.7 133 65.4
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 1.3e-30 136.7 138 56.5
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 2.2e-30 136.0 139 58.3
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.2e-30 136.0 115 63.5
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 2.2e-30 136.0 123 72.4
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 2.9e-30 135.6 120 63.3
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 3.7e-30 135.2 141 56.7
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 3.7e-30 135.2 131 58.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 4.9e-30 134.8 118 68.6
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 6.4e-30 134.4 128 57.8
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 6.4e-30 134.4 123 58.5
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 6.4e-30 134.4 113 65.5
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 8.3e-30 134.0 118 61.9
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.4e-29 133.3 131 58.8
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 1.4e-29 133.3 130 63.8
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.9e-29 132.9 126 57.9
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.4e-29 132.5 135 54.1
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 2.4e-29 132.5 134 56.7
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 2.4e-29 132.5 118 59.3
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 3.2e-29 132.1 116 74.1
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 3.2e-29 132.1 132 61.4
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 4.1e-29 131.7 127 65.4
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 5.4e-29 131.3 113 61.1
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 7.0e-29 131.0 115 62.6
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 7.0e-29 131.0 107 67.3
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 7.0e-29 131.0 141 53.2
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 9.2e-29 130.6 135 54.8
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 9.2e-29 130.6 123 57.7
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 9.2e-29 130.6 136 53.7
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 1.2e-28 130.2 135 54.8
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.6e-28 129.8 125 58.4
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 2.0e-28 129.4 134 56.0
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 6.0e-28 127.9 123 56.9
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 6.0e-28 127.9 133 54.1
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 6.0e-28 127.9 133 54.1
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 6.0e-28 127.9 123 56.1
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 1.0e-27 127.1 133 54.1
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 1.0e-27 127.1 105 76.2
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.3e-27 126.7 117 59.0
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 2.3e-27 125.9 117 59.0
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 2.3e-27 125.9 112 60.7
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 2.3e-27 125.9 126 69.8
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 3.0e-27 125.6 118 58.5
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 5.0e-27 124.8 115 59.1
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 6.6e-27 124.4 117 58.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 8.6e-27 124.0 117 54.7
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.1e-26 123.6 132 52.3
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 4.3e-26 121.7 105 61.9
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 2.1e-25 119.4 115 58.3
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 6.2e-25 117.9 124 54.8
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.4e-24 116.7 126 69.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.8e-24 116.3 128 52.3
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 7.5e-23 110.9 135 45.2
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 9.8e-23 110.5 105 57.1
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 2.9e-22 109.0 123 51.2
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 4.9e-22 108.2 182 46.7
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 1.9e-21 106.3 115 53.0
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 7.1e-21 104.4 149 42.3
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 7.8e-20 100.9 81 65.4
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.0e-19 100.5 112 51.8
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 3.1e-16 89.0 88 58.0
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 9.9e-15 84.0 56 75.0
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 3.7e-14 82.0 58 72.4
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 3.7e-14 82.0 129 46.5
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 2.1e-12 76.3 59 67.8
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 5.1e-11 71.6 66 59.1
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 2.5e-10 69.3 83 48.2
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 6.8e-08 61.2 118 39.8
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 5.8e-07 58.2 79 43.0


User provided reference genes

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