Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0028 Erigeron canadensis HOM05D003090 ORTHO05D003495 0.0e+00 1113.6 566 100.0
ECA234G0967 Erigeron canadensis HOM05D003090 ORTHO05D003495 4.1e-38 163.7 715 29.0
HanXRQChr10g0311901 Helianthus annuus HOM05D003090 ORTHO05D003495 6.6e-36 156.4 680 29.0
Lsat_1_v5_gn_5_136800 Lactuca sativa HOM05D003090 ORTHO05D003495 4.3e-35 153.7 280 41.1
Lsat_1_v5_gn_4_91240 Lactuca sativa HOM05D003090 ORTHO05D003495 2.4e-30 137.9 586 28.8
GSVIVG01016705001 Vitis vinifera HOM05D003090 ORTHO05D003495 5.1e-28 130.2 626 27.6
Dinv37843 Davidia involucrata HOM05D003090 ORTHO05D003495 2.1e-26 124.8 312 35.6
Dinv20402 Davidia involucrata HOM05D003090 ORTHO05D003495 1.4e-25 122.1 320 34.4
CSS0039706 Camellia sinensis var. sinensis HOM05D003090 ORTHO05D003495 3.1e-25 120.9 377 32.4
Manes.04G148600 Manihot esculenta HOM05D003090 ORTHO05D003495 5.2e-25 120.2 334 35.0
HanXRQChr09g0277151 Helianthus annuus HOM05D003090 ORTHO05D003495 9.0e-25 119.4 254 36.2
Manes.11G015500 Manihot esculenta HOM05D003090 ORTHO05D003495 2.0e-24 118.2 322 33.2
CSS0035296 Camellia sinensis var. sinensis HOM05D003090 ORTHO05D003495 2.6e-24 117.9 365 32.9
Cc04_g00950 Coffea canephora HOM05D003090 ORTHO05D003495 5.8e-24 116.7 291 35.1
Duzib192G0537 Durio zibethinus HOM05D003090 ORTHO05D003495 5.8e-24 116.7 312 34.6
Solyc03g122040.4 Solanum lycopersicum HOM05D003090 ORTHO05D003495 9.9e-24 115.9 521 28.8
Actinidia26009 Actinidia chinensis HOM05D003090 ORTHO05D003495 1.3e-23 115.5 342 34.2
Prupe.3G036100 Prunus persica HOM05D003090 ORTHO05D003495 1.7e-23 115.2 316 34.5
Haze_16085 Corylus avellana HOM05D003090 ORTHO05D003495 6.4e-23 113.2 324 35.8
CiPaw.02G133400 Carya illinoinensis HOM05D003090 ORTHO05D003495 8.4e-23 112.8 323 35.0
Migut.I01114 Erythranthe guttata HOM05D003090 ORTHO05D003495 8.4e-23 112.8 323 35.0
Potri.001G164900 Populus trichocarpa HOM05D003090 ORTHO05D003495 1.1e-22 112.5 313 33.2
Nitab4.5_0011227g0020 Nicotiana tabacum HOM05D003090 ORTHO05D003495 1.4e-22 112.1 309 33.7
Peaxi162Scf00038g01937 Petunia axillaris HOM05D003090 ORTHO05D003495 1.4e-22 112.1 299 34.1
Atru.chr1.4104 Acer truncatum HOM05D003090 ORTHO05D003495 1.9e-22 111.7 342 31.0
Duzib235G0529 Durio zibethinus HOM05D000068 ORTHO05D003495 1.9e-22 111.7 305 35.4
Thecc.06G126200 Theobroma cacao HOM05D003090 ORTHO05D003495 1.9e-22 111.7 307 32.9
CAN.G862.31 Capsicum annuum HOM05D003090 ORTHO05D003495 3.2e-22 110.9 331 33.2
TWI23G1014 Tripterygium wilfordii HOM05D003090 ORTHO05D003495 3.2e-22 110.9 316 33.9
COL.COLO4_30823 Corchorus olitorius HOM05D003090 ORTHO05D003495 4.2e-22 110.5 308 33.8
PGSC0003DMG400022906 Solanum tuberosum HOM05D003090 ORTHO05D003495 4.2e-22 110.5 312 33.7
Sabra01G0128100 Salix brachista HOM05D003090 ORTHO05D003495 5.4e-22 110.2 326 31.9
Sopen03g040840 Solanum pennellii HOM05D003090 ORTHO05D003495 5.4e-22 110.2 312 32.7
TWI14G0160 Tripterygium wilfordii HOM05D003090 ORTHO05D003495 5.4e-22 110.2 338 32.5
Gorai.011G057200 Gossypium raimondii HOM05D003090 ORTHO05D003495 7.1e-22 109.8 313 34.2
Lj5C32G3 Lonicera japonica HOM05D003090 ORTHO05D003495 7.1e-22 109.8 289 34.6
Nitab4.5_0002072g0020 Nicotiana tabacum HOM05D003090 ORTHO05D003495 7.1e-22 109.8 311 33.4
DCAR_022659 Daucus carota HOM05D003090 ORTHO05D003495 9.3e-22 109.4 323 33.1
Gohir.D10G053600 Gossypium hirsutum HOM05D003090 ORTHO05D003495 9.3e-22 109.4 328 33.5
Cfa003497 Carpinus fangiana HOM05D003090 ORTHO05D003495 1.2e-21 109.0 325 35.1
MD09G1177000 Malus domestica HOM05D003090 ORTHO05D003495 2.1e-21 108.2 343 32.1
Oeu006740.1 Olea europaea HOM05D003090 ORTHO05D003495 2.1e-21 108.2 295 36.6
Sabra03G0041600 Salix brachista HOM05D003090 ORTHO05D003495 2.1e-21 108.2 329 31.9
MD17G1149300 Malus domestica HOM05D003090 ORTHO05D003495 2.7e-21 107.8 396 29.8
Rhsim08G0241800 Rhododendron simsii HOM05D003090 ORTHO05D003495 2.7e-21 107.8 301 35.2
Eucgr.F02477 Eucalyptus grandis HOM05D003090 ORTHO05D003495 3.5e-21 107.5 307 32.6
Potri.003G070400 Populus trichocarpa HOM05D003090 ORTHO05D003495 3.5e-21 107.5 313 33.2
SalBow6G4788 Salvia bowleyana HOM05D003090 ORTHO05D003495 3.5e-21 107.5 320 31.9
Hund18658 Selenicereus undatus HOM05D003090 ORTHO05D003495 3.5e-21 107.5 308 32.5
Migut.D00921 Erythranthe guttata HOM05D003090 ORTHO05D003495 6.0e-21 106.7 382 32.2
Duzib160G0101 Durio zibethinus HOM05D003090 ORTHO05D003495 1.0e-20 105.9 308 32.8
MSTRG.22532 Avicennia marina HOM05D003090 ORTHO05D003495 1.3e-20 105.5 308 33.4
Gohir.D10G053650 Gossypium hirsutum HOM05D003090 ORTHO05D003495 1.7e-20 105.1 312 33.7
Actinidia24444 Actinidia chinensis HOM05D003090 ORTHO05D003495 2.3e-20 104.8 307 30.6
Aqoxy7G04085 Aquilegia oxysepala HOM05D003090 ORTHO05D003495 3.0e-20 104.4 326 31.3
MELO3C024328.2 Cucumis melo HOM05D003090 ORTHO05D003495 3.0e-20 104.4 316 31.0
SGA_v2.0_scaffold68G22843 Striga asiatica HOM05D003090 ORTHO05D003495 3.0e-20 104.4 339 30.7
CiPaw.01G214800 Carya illinoinensis HOM05D003090 ORTHO05D003495 3.9e-20 104.0 314 33.1
TWI59G0300 Tripterygium wilfordii HOM05D003090 ORTHO05D003495 3.9e-20 104.0 317 32.5
CsaV3_7G034180 Cucumis sativus L. HOM05D003090 ORTHO05D003495 5.1e-20 103.6 321 30.8
Oeu008519.1 Olea europaea HOM05D003090 ORTHO05D003495 8.7e-20 102.8 550 27.8
TAR383G0285 Trochodendron aralioides HOM05D003090 ORTHO05D003495 1.1e-19 102.4 339 31.3
Sed0009174 Sechium edule HOM05D003090 ORTHO05D003495 1.9e-19 101.7 288 32.3
Aa31LG4G2740 Aethionema arabicum HOM05D003090 ORTHO05D003495 5.6e-19 100.1 325 30.5
Nn8g38549 Nelumbo nucifera HOM05D003090 ORTHO05D003495 5.6e-19 100.1 322 31.4
MBI19_g38005_MAGBIO Magnolia biondii HOM05D003090 ORTHO05D003495 7.3e-19 99.8 337 31.2
MSTRG.10927 Avicennia marina HOM05D003090 ORTHO05D003495 1.3e-18 99.0 301 32.2
SalBow7G3082 Salvia bowleyana HOM05D003090 ORTHO05D003495 1.3e-18 99.0 300 33.7
Sc15g0000680 Simmondsia chinensis HOM05D003090 ORTHO05D003495 1.6e-18 98.6 317 31.5
ClCG09G001190 Citrullus lanatus HOM05D003090 ORTHO05D003495 2.8e-18 97.8 301 30.9
QL05p003152 Quercus lobata HOM05D003090 ORTHO05D003495 2.8e-18 97.8 317 32.2
Sed0021543 Sechium edule HOM05D003090 ORTHO05D003495 3.6e-18 97.4 301 30.2
Gorai.009G144900 Gossypium raimondii HOM05D003090 ORTHO05D003495 4.8e-18 97.1 306 32.4
FvH4_6g35280 Fragaria vesca HOM05D003090 ORTHO05D003495 6.2e-18 96.7 309 31.7
FAN09G1628 Fragaria x ananassa HOM05D003090 ORTHO05D003495 6.2e-18 96.7 309 31.7
FAN14G2411 Fragaria x ananassa HOM05D003090 ORTHO05D003495 6.2e-18 96.7 309 31.7
Gohir.D05G140700 Gossypium hirsutum HOM05D003090 ORTHO05D003495 8.1e-18 96.3 306 32.0
Glyma.07G042700 Glycine max HOM05D003090 ORTHO05D003495 1.4e-17 95.5 299 33.4
Gohir.A05G138500 Gossypium hirsutum HOM05D003090 ORTHO05D003495 2.4e-17 94.7 306 32.0
vmacro15063 Vaccinium macrocarpon HOM05D003090 ORTHO05D003495 3.1e-17 94.4 306 34.0
Sopen12g024000 Solanum pennellii HOM05D003090 ORTHO05D003495 4.0e-17 94.0 364 27.7
Actinidia21812 Actinidia chinensis HOM05D003090 ORTHO05D003495 5.3e-17 93.6 212 35.8
Glyma.16G011100 Glycine max HOM05D003090 ORTHO05D003495 5.3e-17 93.6 300 32.7
Oeu015476.1 Olea europaea HOM05D001035 ORTHO05D003495 5.3e-17 93.6 491 26.9
THA.LOC104808065 Tarenaya hassleriana HOM05D003090 ORTHO05D003495 5.3e-17 93.6 324 32.1
TAR626G1887 Trochodendron aralioides HOM05D003090 ORTHO05D003495 5.3e-17 93.6 321 33.0
FAN02G2594 Fragaria x ananassa HOM05D003090 ORTHO05D003495 6.9e-17 93.2 293 31.1
FAN05G3795 Fragaria x ananassa HOM05D003090 ORTHO05D003495 2.0e-16 91.7 302 31.1
PGR119G1216 Punica granatum HOM05D003090 ORTHO05D003495 2.0e-16 91.7 303 31.0
Solyc12g049510.3 Solanum lycopersicum HOM05D003090 ORTHO05D003495 2.0e-16 91.7 360 28.9
RcHm_v2.0_Chr2g0146661 Rosa chinensis HOM05D003090 ORTHO05D003495 2.6e-16 91.3 302 29.8
Hund05716 Selenicereus undatus HOM05D003090 ORTHO05D003495 2.6e-16 91.3 368 28.8
CDE04G0552 Ceratophyllum demersum HOM05D003090 ORTHO05D003495 4.5e-16 90.5 310 32.3
Gohir.A10G052001 Gossypium hirsutum HOM05D003090 ORTHO05D003495 5.8e-16 90.1 298 31.9
PSO223G0045 Papaver somniferum HOM05D003090 ORTHO05D003495 7.6e-16 89.7 307 30.0
Ah.08g217100 Amaranthus hybridus HOM05D003090 ORTHO05D003495 9.9e-16 89.4 304 28.9
unitig_749.g14040 Utricularia gibba HOM05D003090 ORTHO05D003495 9.9e-16 89.4 296 32.1
Phvul.010G126300 Phaseolus vulgaris HOM05D003090 ORTHO05D003495 1.7e-15 88.6 298 31.2
Psat4g167440 Pisum sativum HOM05D003090 ORTHO05D003495 1.7e-15 88.6 282 32.3
ATR0681G027 Amborella trichopoda HOM05D003090 ORTHO05D003495 2.9e-15 87.8 316 30.1
CANSAT56G2272 Cannabis sativa HOM05D003090 ORTHO05D003495 2.9e-15 87.8 379 28.2
THA.LOC104822667 Tarenaya hassleriana HOM05D003090 ORTHO05D003495 2.9e-15 87.8 292 30.8
Nitab4.5_0000357g0030 Nicotiana tabacum HOM05D003090 ORTHO05D003495 6.4e-15 86.7 352 28.1
EL10Ac7g16452 Beta vulgaris HOM05D003090 ORTHO05D003495 8.4e-15 86.3 341 29.0
CAN.G1243.12 Capsicum annuum HOM05D003090 ORTHO05D003495 8.4e-15 86.3 368 28.8
Aqoxy7G00988 Aquilegia oxysepala HOM05D003090 ORTHO05D003495 1.1e-14 85.9 267 29.6
Ah.08g217080 Amaranthus hybridus HOM05D003090 ORTHO05D003495 1.4e-14 85.5 311 29.3
SGA_v2.0_scaffold4G02088 Striga asiatica HOM05D003090 ORTHO05D003495 1.4e-14 85.5 324 30.2
Lalb_Chr04g0253771 Lupinus albus HOM05D003090 ORTHO05D003495 1.9e-14 85.1 302 31.8
Nitab4.5_0006425g0050 Nicotiana tabacum HOM05D003090 ORTHO05D003495 2.4e-14 84.7 357 27.5
THA.LOC104815615 Tarenaya hassleriana HOM05D003090 ORTHO05D003495 2.4e-14 84.7 289 30.8
PSO386G0257 Papaver somniferum HOM05D003090 ORTHO05D003495 5.4e-14 83.6 344 28.2
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 7.1e-14 83.2 264 34.8
Carub.0002s1925 Capsella rubella HOM05D003090 ORTHO05D003495 9.3e-14 82.8 290 30.7
BcaC01g03955 Brassica carinata HOM05D003090 ORTHO05D003495 1.2e-13 82.4 272 30.9
BolC3t16941H Brassica oleracea HOM05D003090 ORTHO05D003495 1.2e-13 82.4 272 30.9
Lj3g0022220 Lotus japonicus HOM05D003090 ORTHO05D003495 1.2e-13 82.4 301 31.2
Ca_04810_v3 Cicer arietinum L. HOM05D003090 ORTHO05D003495 1.6e-13 82.0 293 30.4
Ca_30858_v3 Cicer arietinum L. HOM05D003090 ORTHO05D003495 1.6e-13 82.0 293 30.4
Sopen06g022500 Solanum pennellii HOM05D003090 ORTHO05D003495 1.6e-13 82.0 308 27.9
C03p46760 Brassica napus HOM05D003090 ORTHO05D003495 2.1e-13 81.6 261 30.3
Sp3g12420 Schrenkiella parvula HOM05D003090 ORTHO05D003495 2.1e-13 81.6 285 29.8
VMungo0331G0259 Vigna mungo HOM05D003090 ORTHO05D003495 2.1e-13 81.6 289 30.8
A03p38650 Brassica napus HOM05D003090 ORTHO05D003495 2.7e-13 81.3 266 30.5
Cpa.g.sc25.160 Carica papaya HOM05D003090 ORTHO05D003495 2.7e-13 81.3 209 32.5
Lj9A536T75 Lonicera japonica HOM05D003090 ORTHO05D003495 3.5e-13 80.9 287 29.3
Nitab4.5_0002716g0080 Nicotiana tabacum HOM05D003090 ORTHO05D003495 3.5e-13 80.9 281 29.9
arahy.Tifrunner.gnm1.ann1.XWXJ6Y Arachis hypogaea HOM05D003090 ORTHO05D003495 4.6e-13 80.5 477 26.8
BraA03t13012Z Brassica rapa HOM05D003090 ORTHO05D003495 4.6e-13 80.5 271 29.9
Thhalv10019917m.g Eutrema salsugineum HOM05D003090 ORTHO05D003495 4.6e-13 80.5 285 29.1
AUR62001437 Chenopodium quinoa HOM05D003090 ORTHO05D003495 6.0e-13 80.1 308 27.9
CDE06G1187 Ceratophyllum demersum HOM05D003090 ORTHO05D003495 7.9e-13 79.7 293 29.0
PGSC0003DMG400004896 Solanum tuberosum HOM05D003090 ORTHO05D003495 1.0e-12 79.3 286 29.4
AL2G32070 Arabidopsis lyrata HOM05D003090 ORTHO05D003495 1.3e-12 79.0 313 27.8
Nitab4.5_0003137g0040 Nicotiana tabacum HOM05D003090 ORTHO05D003495 1.3e-12 79.0 279 28.3
CARHR089040 Cardamine hirsuta HOM05D003090 ORTHO05D003495 1.8e-12 78.6 287 30.3
Thhalv10006648m.g Eutrema salsugineum HOM05D003090 ORTHO05D003495 2.3e-12 78.2 293 29.4
C05p53470 Brassica napus HOM05D003090 ORTHO05D003495 5.1e-12 77.0 327 27.8
BolC5t34024H Brassica oleracea HOM05D003090 ORTHO05D003495 5.1e-12 77.0 327 27.8
Nn6g35644 Nelumbo nucifera HOM05D003090 ORTHO05D003495 6.7e-12 76.6 186 32.8
Solyc06g063050.4 Solanum lycopersicum HOM05D003090 ORTHO05D003495 8.7e-12 76.3 323 27.2
AT1G72410 Arabidopsis thaliana HOM05D003090 ORTHO05D003495 1.1e-11 75.9 339 27.4
A05p35290 Brassica napus HOM05D003090 ORTHO05D003495 1.1e-11 75.9 434 27.9
BraA05t22339Z Brassica rapa HOM05D003090 ORTHO05D003495 1.1e-11 75.9 434 27.9
AUR62009929 Chenopodium quinoa HOM05D003090 ORTHO05D003495 1.1e-11 75.9 297 27.3
arahy.Tifrunner.gnm1.ann1.E7RSE6 Arachis hypogaea HOM05D003090 ORTHO05D003495 1.5e-11 75.5 467 24.8
Sp1g15500 Schrenkiella parvula HOM05D003090 ORTHO05D003495 1.5e-11 75.5 286 29.4
SpUn0033_0050 Schrenkiella parvula HOM05D003090 ORTHO05D003495 1.5e-11 75.5 286 29.4
unitig_26.g8923 Utricularia gibba HOM05D003090 ORTHO05D003495 1.5e-11 75.5 294 29.9
THA.LOC104810377 Tarenaya hassleriana HOM05D003090 ORTHO05D003495 2.5e-11 74.7 625 25.1
Carub.0003s1377 Capsella rubella HOM05D003090 ORTHO05D003495 3.3e-11 74.3 445 27.0
AL3G26410 Arabidopsis lyrata HOM05D003090 ORTHO05D003495 7.4e-11 73.2 339 28.6
Eucgr.J02614 Eucalyptus grandis HOM05D003090 ORTHO05D003495 7.4e-11 73.2 296 28.0
Aa31LG8G1410 Aethionema arabicum HOM05D003090 ORTHO05D003495 1.6e-10 72.0 399 26.1
AT3G14172 Arabidopsis thaliana HOM05D003090 ORTHO05D003495 2.1e-10 71.6 285 28.1
Lalb_Chr17g0343411 Lupinus albus HOM05D003090 ORTHO05D003495 4.8e-10 70.5 299 28.1
BcaB04g18822 Brassica carinata HOM05D003090 ORTHO05D003495 6.2e-10 70.1 312 28.5
Peaxi162Scf00207g01540 Petunia axillaris HOM05D003090 ORTHO05D003495 1.4e-09 68.9 203 31.0
C05p15790 Brassica napus HOM05D003090 ORTHO05D003495 2.4e-09 68.2 278 26.6
BolC5t30284H Brassica oleracea HOM05D003090 ORTHO05D003495 2.4e-09 68.2 278 26.6
Oeu000386.4 Olea europaea HOM05D003090 ORTHO05D003495 3.1e-09 67.8 237 28.3
A06p13320 Brassica napus HOM05D003090 ORTHO05D003495 5.3e-09 67.0 302 26.8
CARHR017960 Cardamine hirsuta HOM05D003090 ORTHO05D003495 5.3e-09 67.0 438 23.5
Zm00001eb327470 Zea mays HOM05D003090 ORTHO05D003495 5.3e-09 67.0 277 27.1
Medtr8g022280 Medicago truncatula HOM05D003090 ORTHO05D003495 1.5e-08 65.5 352 26.4
Zm00001eb109270 Zea mays HOM05D003090 ORTHO05D003495 1.5e-08 65.5 306 27.1
Os07g0616000 Oryza sativa ssp. japonica HOM05D003090 ORTHO05D003495 2.0e-08 65.1 321 26.8
CAN.G1743.4 Capsicum annuum HOM05D003090 ORTHO05D003495 2.6e-08 64.7 306 25.5
Aa31LG7G2190 Aethionema arabicum HOM05D003090 ORTHO05D003495 3.4e-08 64.3 242 30.2
HPP92_005872 Vanilla planifolia HOM05D003090 ORTHO05D003495 3.4e-08 64.3 342 25.4
BraA06t24485Z Brassica rapa HOM05D003090 ORTHO05D003495 4.5e-08 63.9 298 26.2
AL1G29630 Arabidopsis lyrata HOM05D003090 ORTHO05D003495 5.8e-08 63.5 265 28.7
PSO421G0205 Papaver somniferum HOM05D003090 ORTHO05D003495 8.4e-07 59.7 239 28.9
CARHR065300 Cardamine hirsuta HOM05D003090 ORTHO05D003495 1.1e-06 59.3 418 25.8
MSTRG.4542 Avicennia marina HOM05D003090 ORTHO05D003495 1.9e-06 58.5 152 31.6
SEGI_13597 Sequoiadendron giganteum HOM05D003090 ORTHO05D003495 4.2e-06 57.4 356 24.7


User provided reference genes

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