Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4930 Erigeron canadensis HOM05D009106 ORTHO05D010235 2.4e-131 472.2 248 100.0
Lsat_1_v5_gn_3_94261 Lactuca sativa HOM05D009784 ORTHO05D000088 8.7e-33 144.8 248 35.9
ECA132G0002 Erigeron canadensis HOM05D009784 ORTHO05D010235 1.9e-27 127.1 214 36.4
Lsat_1_v5_gn_3_94320 Lactuca sativa HOM05D000395 ORTHO05D000088 1.2e-18 97.8 235 31.9
ECA246G4608 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-18 95.5 164 42.1
ECA246G4121 Erigeron canadensis HOM05D009784 ORTHO05D010235 3.0e-17 93.2 87 54.0
Cc07_g05480 Coffea canephora HOM05D000823 ORTHO05D000088 2.0e-16 90.5 226 28.3
PSO170G0378 Papaver somniferum HOM05D000823 ORTHO05D000088 1.7e-15 87.4 218 27.5
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.1e-14 84.7 232 26.3
FvH4_2g06970 Fragaria vesca HOM05D000823 ORTHO05D000088 1.8e-14 84.0 236 28.8
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 3.1e-14 83.2 232 26.3
Gohir.D03G019700 Gossypium hirsutum HOM05D000823 ORTHO05D010235 6.9e-14 82.0 236 26.3
Gorai.003G020400 Gossypium raimondii HOM05D000823 ORTHO05D010235 6.9e-14 82.0 236 26.3
Manes.13G130800 Manihot esculenta HOM05D000823 ORTHO05D000088 1.2e-13 81.3 244 28.7
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 2.0e-13 80.5 233 28.8
ECA234G1207 Erigeron canadensis HOM05D009784 ORTHO05D000088 3.4e-13 79.7 239 29.7
Thecc.01G047300 Theobroma cacao HOM05D000823 ORTHO05D000088 3.4e-13 79.7 245 25.7
Gohir.A02G160800 Gossypium hirsutum HOM05D000823 ORTHO05D010235 7.7e-13 78.6 236 25.8
ECA234G4443 Erigeron canadensis HOM05D009784 ORTHO05D010235 1.0e-12 78.2 216 31.5
HanXRQChr12g0361051 Helianthus annuus HOM05D000823 ORTHO05D010235 1.3e-12 77.8 216 30.1
Gohir.A02G160700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.7e-12 77.4 235 26.4
ECA234G0573 Erigeron canadensis HOM05D009784 ORTHO05D010235 2.2e-12 77.0 230 24.3
RcHm_v2.0_Chr6g0259331 Rosa chinensis HOM05D000823 ORTHO05D000088 3.8e-12 76.3 236 27.1
ECA234G2376 Erigeron canadensis HOM05D009784 ORTHO05D010235 5.0e-12 75.9 249 26.1
Lsat_1_v5_gn_4_9181 Lactuca sativa HOM05D009784 ORTHO05D010235 8.5e-12 75.1 234 31.2
FAN15G3650 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.1e-11 74.7 238 26.9
Cc07_g05490 Coffea canephora HOM05D000823 ORTHO05D000088 2.5e-11 73.6 217 25.8
Lsat_1_v5_gn_4_8941 Lactuca sativa HOM05D009784 ORTHO05D000088 7.2e-11 72.0 228 33.3
Nitab4.5_0005238g0010 Nicotiana tabacum HOM05D009106 ORTHO05D010235 9.4e-11 71.6 232 28.0
RcHm_v2.0_Chr6g0259931 Rosa chinensis HOM05D000823 ORTHO05D000088 9.4e-11 71.6 240 25.8
RcHm_v2.0_Chr6g0259251 Rosa chinensis HOM05D000823 ORTHO05D000088 1.2e-10 71.2 226 27.0
Solyc02g065340.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.1e-10 70.5 225 24.9
Nitab4.5_0000806g0040 Nicotiana tabacum HOM05D009106 ORTHO05D010235 3.6e-10 69.7 233 27.5
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 4.7e-10 69.3 220 25.9
RcHm_v2.0_Chr6g0259241 Rosa chinensis HOM05D000823 ORTHO05D000088 4.7e-10 69.3 219 26.9
FAN24G2044 Fragaria x ananassa HOM05D000823 ORTHO05D000088 7.9e-10 68.6 215 27.4
Gorai.003G020700 Gossypium raimondii HOM05D000823 ORTHO05D000088 7.9e-10 68.6 241 25.7
Peaxi162Scf00234g00222 Petunia axillaris HOM05D009106 ORTHO05D010235 7.9e-10 68.6 228 24.6
PGSC0003DMG400043353 Solanum tuberosum HOM05D009106 ORTHO05D010235 7.9e-10 68.6 224 31.2
Cc01_g06500 Coffea canephora HOM05D005797 ORTHO05D000088 1.4e-09 67.8 74 44.6
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-09 67.8 214 25.7
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 1.8e-09 67.4 257 25.7
FAN10G0782 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.0e-09 66.6 222 25.2
FAN10G2447 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.0e-09 66.6 222 25.2
PGR102G0754 Punica granatum HOM05D000823 ORTHO05D000088 3.9e-09 66.2 232 23.3
Lsat_1_v5_gn_4_9001 Lactuca sativa HOM05D009784 ORTHO05D000088 5.1e-09 65.9 230 25.7
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 1.1e-08 64.7 224 21.4
AT4G31690 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.5e-08 64.3 226 23.5
FvH4_2g07300 Fragaria vesca HOM05D000823 ORTHO05D000088 2.0e-08 63.9 246 30.5
FAN24G0466 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.0e-08 63.9 246 30.5
FAN27G1325 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.0e-08 63.9 246 25.2
Aqoxy5G01406 Aquilegia oxysepala HOM05D000395 ORTHO05D000088 2.6e-08 63.5 243 23.9
COL.COLO4_11318 Corchorus olitorius HOM05D056455 ORTHO05D000088 3.3e-08 63.2 237 25.7
FvH4_7g12210 Fragaria vesca HOM05D000888 ORTHO05D000740 3.3e-08 63.2 211 25.1
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 3.3e-08 63.2 222 26.6
Peaxi162Scf01198g00214 Petunia axillaris HOM05D009106 ORTHO05D010235 3.3e-08 63.2 235 23.4
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 5.7e-08 62.4 217 25.3
Cc02_g18270 Coffea canephora HOM05D000823 ORTHO05D000088 9.7e-08 61.6 224 25.0
Prupe.4G178200 Prunus persica HOM05D000823 ORTHO05D000088 1.3e-07 61.2 226 24.8
Sopen06g030580 Solanum pennellii HOM05D000823 ORTHO05D000088 1.3e-07 61.2 205 22.9
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 1.7e-07 60.8 234 26.5
Aqoxy1G00852 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.2e-07 60.5 242 23.6
PGR042G3245 Punica granatum HOM05D000823 ORTHO05D000088 2.2e-07 60.5 217 24.4
HanXRQChr08g0216601 Helianthus annuus HOM05D009784 ORTHO05D010235 2.8e-07 60.1 235 23.4
Peaxi162Scf00234g00218 Petunia axillaris HOM05D009106 ORTHO05D010235 2.8e-07 60.1 225 23.1
ECA232G4654 Erigeron canadensis HOM05D000823 ORTHO05D016096 3.7e-07 59.7 208 25.5
Solyc06g074160.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 3.7e-07 59.7 205 22.9
AUR62027222 Chenopodium quinoa HOM05D000823 ORTHO05D000088 4.8e-07 59.3 223 24.7
Sabra01G0175400 Salix brachista HOM05D000395 ORTHO05D000088 4.8e-07 59.3 230 22.6
SEGI_32289 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 4.8e-07 59.3 268 24.6
Sopen11g021070 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 59.3 98 31.6
FvH4_2g06960 Fragaria vesca HOM05D000823 ORTHO05D000088 6.3e-07 58.9 225 24.0
FAN01G3034 Fragaria x ananassa HOM05D000888 ORTHO05D000740 6.3e-07 58.9 217 23.0
Gorai.007G209200 Gossypium raimondii HOM05D000395 ORTHO05D000088 6.3e-07 58.9 222 25.7
CANSAT01G0597 Cannabis sativa HOM05D000395 ORTHO05D000088 8.2e-07 58.5 233 24.9
AUR62002338 Chenopodium quinoa HOM05D000888 ORTHO05D000740 1.1e-06 58.2 213 26.8
RcHm_v2.0_Chr4g0425711 Rosa chinensis HOM05D000823 ORTHO05D000088 1.1e-06 58.2 237 24.9
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.1e-06 58.2 248 23.8
Actinidia36524 Actinidia chinensis HOM05D001349 ORTHO05D001980 1.4e-06 57.8 259 23.6
Solyc00g500092.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.4e-06 57.8 92 30.4
Solyc00g500219.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.4e-06 57.8 92 30.4
Solyc03g036477.2 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.4e-06 57.8 92 30.4
PGSC0003DMG400005893 Solanum tuberosum HOM05D000823 ORTHO05D000088 1.4e-06 57.8 205 23.4
FvH4_4g19990 Fragaria vesca HOM05D000823 ORTHO05D009132 1.8e-06 57.4 238 22.3
CDE01G0565 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 2.4e-06 57.0 224 24.1
Cc00_g07580 Coffea canephora HOM05D000823 ORTHO05D000088 2.4e-06 57.0 218 23.9
Dinv36014 Davidia involucrata HOM05D000888 ORTHO05D000740 2.4e-06 57.0 210 23.3
Solyc02g081780.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.4e-06 57.0 262 25.6
AT4G31640 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 3.1e-06 56.6 233 22.3
AUR62028979 Chenopodium quinoa HOM05D017700 ORTHO05D000088 3.1e-06 56.6 228 22.8
FAN12G2331 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.1e-06 56.6 236 22.5
MD11G1250800 Malus domestica HOM05D000823 ORTHO05D000088 3.1e-06 56.6 226 23.9
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 3.1e-06 56.6 73 31.5
BcaNung05177 Brassica carinata HOM05D000888 ORTHO05D000740 4.1e-06 56.2 226 24.3
FAN23G1978 Fragaria x ananassa HOM05D000823 ORTHO05D009132 4.1e-06 56.2 234 24.8
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 5.3e-06 55.8 242 26.0
FvH4_2g13150 Fragaria vesca HOM05D000011 ORTHO05D000157 5.3e-06 55.8 71 42.3
RhsimUnG0104100 Rhododendron simsii HOM05D000395 ORTHO05D000088 5.3e-06 55.8 225 20.0
Solyc00g011660.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 5.3e-06 55.8 92 30.4
Sopen00g003940 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.8 92 30.4
AUR62002336 Chenopodium quinoa HOM05D000888 ORTHO05D000740 7.0e-06 55.5 226 25.2
MD02G1160300 Malus domestica HOM05D000395 ORTHO05D000088 7.0e-06 55.5 217 24.9
Solyc00g500222.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 7.0e-06 55.5 92 30.4
SGA_v2.0_scaffold55G19766 Striga asiatica HOM05D000823 ORTHO05D000088 7.0e-06 55.5 201 22.4
CsaV3_6G042830 Cucumis sativus L. HOM05D000395 ORTHO05D000088 9.1e-06 55.1 213 25.4
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 9.1e-06 55.1 217 22.6
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 9.1e-06 55.1 207 26.6
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 9.1e-06 55.1 74 36.5
RcHm_v2.0_Chr5g0033041 Rosa chinensis HOM05D000823 ORTHO05D000088 9.1e-06 55.1 242 21.9


User provided reference genes

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