Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1804 Erigeron canadensis HOM05D007496 ORTHO05D009479 2.7e-198 696.4 350 100.0
ECA246G2499 Erigeron canadensis HOM05D001243 ORTHO05D000843 5.7e-71 273.5 277 61.0
ECA246G2846 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.4e-45 189.1 252 48.8
ECA246G3710 Erigeron canadensis HOM05D001243 ORTHO05D000843 6.1e-41 173.7 251 48.6
ECA246G0699 Erigeron canadensis HOM05D001243 ORTHO05D000843 3.0e-40 171.4 260 46.2
ECA246G2897 Erigeron canadensis HOM05D001243 ORTHO05D000843 4.0e-40 171.0 243 46.9
ECA246G0835 Erigeron canadensis HOM05D001243 ORTHO05D000843 8.8e-40 169.9 260 44.6
Lsat_1_v5_gn_3_27020 Lactuca sativa HOM05D001243 ORTHO05D000843 8.8e-40 169.9 217 48.8
Lsat_1_v5_gn_3_27040 Lactuca sativa HOM05D001243 ORTHO05D000843 8.8e-40 169.9 217 48.8
ECA246G1362 Erigeron canadensis HOM05D001243 ORTHO05D000843 4.4e-39 167.5 250 45.6
ECA246G1979 Erigeron canadensis HOM05D001243 ORTHO05D000843 6.3e-38 163.7 258 45.0
ECA232G2498 Erigeron canadensis HOM05D001243 ORTHO05D000843 9.5e-34 149.8 190 51.1
HanXRQChr14g0446881 Helianthus annuus HOM05D007496 ORTHO05D009479 4.9e-30 137.5 156 50.0
Lsat_1_v5_gn_4_15320 Lactuca sativa HOM05D001243 ORTHO05D000843 9.2e-29 133.3 151 51.7
Lsat_1_v5_gn_3_27601 Lactuca sativa HOM05D007496 ORTHO05D009479 1.3e-27 129.4 84 67.9
MD13G1010200 Malus domestica HOM05D007496 ORTHO05D009479 7.3e-26 123.6 84 69.0
Lsat_1_v5_gn_3_26861 Lactuca sativa HOM05D001243 ORTHO05D000843 2.1e-25 122.1 155 49.0
Prupe.1G342600 Prunus persica HOM05D007496 ORTHO05D009479 8.0e-25 120.2 100 60.0
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 1.0e-24 119.8 117 52.1
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 1.2e-23 116.3 117 52.1
Dinv28147 Davidia involucrata HOM05D007496 ORTHO05D009479 1.2e-23 116.3 87 62.1
PGSC0003DMG401017024 Solanum tuberosum HOM05D007496 ORTHO05D009479 2.6e-23 115.2 90 61.1
PGSC0003DMG402017024 Solanum tuberosum HOM05D007496 ORTHO05D009479 2.6e-23 115.2 90 61.1
Sopen02g005740 Solanum pennellii HOM05D007496 ORTHO05D009479 3.4e-23 114.8 90 60.0
Glyma.08G090700 Glycine max HOM05D007496 ORTHO05D009479 5.8e-23 114.0 117 50.4
Solyc02g021270.3 Solanum lycopersicum HOM05D007496 ORTHO05D009479 9.8e-23 113.2 90 58.9
Thecc.02G296100 Theobroma cacao HOM05D007496 ORTHO05D009479 1.3e-22 112.8 86 59.3
Actinidia38410 Actinidia chinensis HOM05D007496 ORTHO05D009479 1.7e-22 112.5 97 55.7
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 2.2e-22 112.1 84 61.9
FAN07G1579 Fragaria x ananassa HOM05D007496 ORTHO05D009479 2.9e-22 111.7 84 65.5
FAN17G2862 Fragaria x ananassa HOM05D007496 ORTHO05D009479 2.9e-22 111.7 84 65.5
CSS0042252 Camellia sinensis var. sinensis HOM05D007496 ORTHO05D009479 3.7e-22 111.3 84 61.9
PSO782G5018 Papaver somniferum HOM05D007496 ORTHO05D009479 3.7e-22 111.3 87 58.6
Phvul.002G186700 Phaseolus vulgaris HOM05D007496 ORTHO05D009479 3.7e-22 111.3 117 50.4
QL03p041883 Quercus lobata HOM05D007496 ORTHO05D009479 6.4e-22 110.5 157 43.9
FvH4_4g36310 Fragaria vesca HOM05D007496 ORTHO05D009479 8.3e-22 110.2 84 64.3
FAN12G2685 Fragaria x ananassa HOM05D007496 ORTHO05D009479 8.3e-22 110.2 84 64.3
PSO063G5648 Papaver somniferum HOM05D007496 ORTHO05D009479 1.1e-21 109.8 84 59.5
RcHm_v2.0_Chr4g0446071 Rosa chinensis HOM05D007496 ORTHO05D009479 1.1e-21 109.8 84 64.3
Lalb_Chr13g0293071 Lupinus albus HOM05D007496 ORTHO05D009479 1.4e-21 109.4 86 57.0
FAN17G2962 Fragaria x ananassa HOM05D007496 ORTHO05D009479 1.9e-21 109.0 100 59.0
Psat0s1866g0040 Pisum sativum HOM05D007496 ORTHO05D009479 2.4e-21 108.6 117 47.9
Ca_18211_v3 Cicer arietinum L. HOM05D007496 ORTHO05D009479 3.2e-21 108.2 117 47.0
arahy.Tifrunner.gnm1.ann1.UN0AT6 Arachis hypogaea HOM05D007496 ORTHO05D009479 4.1e-21 107.8 116 50.0
Cfa021290 Carpinus fangiana HOM05D007496 ORTHO05D009479 5.4e-21 107.5 100 54.0
Haze_01569 Corylus avellana HOM05D007496 ORTHO05D009479 5.4e-21 107.5 100 54.0
Sabra10G0070900 Salix brachista HOM05D007496 ORTHO05D009479 5.4e-21 107.5 100 55.0
Nitab4.5_0000415g0080 Nicotiana tabacum HOM05D007496 ORTHO05D009479 7.0e-21 107.1 120 50.0
Nitab4.5_0002936g0010 Nicotiana tabacum HOM05D007496 ORTHO05D009479 7.0e-21 107.1 120 50.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 9.2e-21 106.7 134 47.8
Aqoxy5G03884 Aquilegia oxysepala HOM05D007496 ORTHO05D009479 1.2e-20 106.3 88 54.5
Potri.010G098400 Populus trichocarpa HOM05D007496 ORTHO05D009479 1.6e-20 105.9 90 57.8
Manes.10G064000 Manihot esculenta HOM05D007496 ORTHO05D009479 2.0e-20 105.5 100 51.0
Rhsim09G0071100 Rhododendron simsii HOM05D007496 ORTHO05D009479 2.0e-20 105.5 96 54.2
VMungo0251G1188 Vigna mungo HOM05D007496 ORTHO05D009479 2.0e-20 105.5 85 56.5
Gohir.A12G152700 Gossypium hirsutum HOM05D007496 ORTHO05D009479 6.0e-20 104.0 85 56.5
SHI14851 Sapria himalayana HOM05D007496 ORTHO05D009479 6.0e-20 104.0 103 47.6
CiPaw.05G161700 Carya illinoinensis HOM05D007496 ORTHO05D009479 7.8e-20 103.6 100 53.0
Gohir.D12G156100 Gossypium hirsutum HOM05D007496 ORTHO05D009479 7.8e-20 103.6 85 57.6
Gorai.008G168700 Gossypium raimondii HOM05D007496 ORTHO05D009479 7.8e-20 103.6 85 57.6
COL.COLO4_27514 Corchorus olitorius HOM05D007496 ORTHO05D009479 1.3e-19 102.8 86 57.0
Lalb_Chr07g0188091 Lupinus albus HOM05D007496 ORTHO05D009479 2.3e-19 102.1 86 53.5
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 2.3e-19 102.1 168 39.9
Cc10_g12620 Coffea canephora HOM05D007496 ORTHO05D009479 3.0e-19 101.7 90 56.7
CsaV3_5G017450 Cucumis sativus L. HOM05D007496 ORTHO05D009479 3.9e-19 101.3 91 52.7
Sed0014874 Sechium edule HOM05D007496 ORTHO05D009479 5.0e-19 100.9 100 50.0
Ciclev10004591m.g Citrus clementina HOM05D007496 ORTHO05D009479 6.6e-19 100.5 86 57.0
MELO3C033967.2 Cucumis melo HOM05D007496 ORTHO05D009479 6.6e-19 100.5 91 51.6
Lj4g0018028 Lotus japonicus HOM05D007496 ORTHO05D009479 6.6e-19 100.5 117 46.2
TPR.G34766 Trifolium pratense HOM05D007496 ORTHO05D009479 8.6e-19 100.1 86 54.7
ClCG01G007050 Citrullus lanatus HOM05D007496 ORTHO05D009479 1.1e-18 99.8 91 49.5
CiPaw.05G161800 Carya illinoinensis HOM05D007496 ORTHO05D009479 1.5e-18 99.4 86 57.0
Migut.L00784 Erythranthe guttata HOM05D007496 ORTHO05D009479 1.5e-18 99.4 102 52.0
Peaxi162Scf00655g00032 Petunia axillaris HOM05D007496 ORTHO05D009479 1.9e-18 99.0 85 56.5
Nn1g01012 Nelumbo nucifera HOM05D007496 ORTHO05D009479 3.3e-18 98.2 88 48.9
Aa31LG2G7790 Aethionema arabicum HOM05D007496 ORTHO05D009479 7.3e-18 97.1 115 43.5
MBI04_g09492_MAGBIO Magnolia biondii HOM05D007496 ORTHO05D009479 9.5e-18 96.7 88 54.5
SalBow2G0206 Salvia bowleyana HOM05D007496 ORTHO05D009479 9.5e-18 96.7 90 52.2
AUR62017779 Chenopodium quinoa HOM05D007496 ORTHO05D009479 1.2e-17 96.3 155 35.5
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 1.6e-17 95.9 157 36.3
ECA232G2504 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.8e-17 95.1 249 34.9
Sc03g0005490 Simmondsia chinensis HOM05D007496 ORTHO05D009479 3.6e-17 94.7 146 37.0
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 4.7e-17 94.4 115 44.3
Ah.02g120040 Amaranthus hybridus HOM05D007496 ORTHO05D009479 6.2e-17 94.0 83 49.4
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 6.2e-17 94.0 95 53.7
BcaC06g34078 Brassica carinata HOM05D007496 ORTHO05D009479 6.2e-17 94.0 95 50.5
C07p33010 Brassica napus HOM05D007496 ORTHO05D009479 6.2e-17 94.0 95 50.5
BolC7t43809H Brassica oleracea HOM05D007496 ORTHO05D009479 6.2e-17 94.0 95 50.5
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 8.1e-17 93.6 101 49.5
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 8.1e-17 93.6 159 37.1
TAR636G1662 Trochodendron aralioides HOM05D007496 ORTHO05D009479 8.1e-17 93.6 93 46.2
CARHR144810 Cardamine hirsuta HOM05D007496 ORTHO05D009479 1.1e-16 93.2 82 54.9
Oeu001125.1 Olea europaea HOM05D007496 ORTHO05D009479 1.8e-16 92.4 88 53.4
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 2.3e-16 92.0 93 52.7
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 2.3e-16 92.0 115 43.5
CAN.G1013.31 Capsicum annuum HOM05D007496 ORTHO05D009479 2.3e-16 92.0 99 50.5
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 2.3e-16 92.0 113 45.1
MSTRG.20095 Avicennia marina HOM05D007496 ORTHO05D009479 3.1e-16 91.7 155 40.0
SGA_v2.0_scaffold4G02164 Striga asiatica HOM05D007496 ORTHO05D009479 1.2e-15 89.7 163 37.4
SGA_v2.0_scaffold169G38601 Striga asiatica HOM05D007496 ORTHO05D009479 2.0e-15 89.0 163 36.2
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 4.4e-15 87.8 123 43.9
HanXRQChr14g0428571 Helianthus annuus HOM05D001243 ORTHO05D000843 1.3e-14 86.3 205 33.2
TPR.G33063 Trifolium pratense HOM05D007496 ORTHO05D009479 3.7e-14 84.7 86 48.8
Lsat_1_v5_gn_3_26941 Lactuca sativa HOM05D001243 ORTHO05D000843 8.3e-14 83.6 123 43.9
HanXRQChr14g0428541 Helianthus annuus HOM05D001243 ORTHO05D000843 1.9e-13 82.4 152 38.2
ECA246G0104 Erigeron canadensis HOM05D001243 ORTHO05D000843 5.4e-13 80.9 178 35.4
ECA246G0766 Erigeron canadensis HOM05D001243 ORTHO05D000843 7.1e-13 80.5 217 34.6
Glyma.05G135601 Glycine max HOM05D007496 ORTHO05D009479 4.6e-12 77.8 96 42.7
Lsat_1_v5_gn_3_111880 Lactuca sativa HOM05D001243 ORTHO05D000843 1.0e-11 76.6 169 32.5
ECA246G3611 Erigeron canadensis HOM05D001243 ORTHO05D000843 3.9e-11 74.7 150 38.0
HanXRQChr11g0327941 Helianthus annuus HOM05D001243 ORTHO05D000843 6.6e-11 73.9 218 32.6
HPP92_012737 Vanilla planifolia HOM05D007496 ORTHO05D009479 6.6e-11 73.9 118 40.7
HanXRQChr17g0536991 Helianthus annuus HOM05D001243 ORTHO05D000843 8.6e-11 73.6 212 32.1
arahy.Tifrunner.gnm1.ann1.0U1JLE Arachis hypogaea HOM05D007496 ORTHO05D009479 1.1e-10 73.2 49 69.4
ECA236G1794 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.5e-10 72.0 185 34.1
ECA233G5439 Erigeron canadensis HOM05D001243 ORTHO05D000843 3.3e-10 71.6 165 35.2
Lsat_1_v5_gn_3_26821 Lactuca sativa HOM05D001243 ORTHO05D000843 3.3e-10 71.6 100 49.0
ECA246G1924 Erigeron canadensis HOM05D001243 ORTHO05D000843 7.3e-10 70.5 266 27.1
ECA236G0843 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.2e-09 69.7 299 28.8
ECA240G2125 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.8e-09 68.6 274 27.0
ECA246G3515 Erigeron canadensis HOM05D001243 ORTHO05D000843 3.6e-09 68.2 200 33.5
HanXRQChr14g0429371 Helianthus annuus HOM05D001243 ORTHO05D000843 3.6e-09 68.2 252 31.0
HanXRQChr17g0537121 Helianthus annuus HOM05D001243 ORTHO05D000843 4.7e-09 67.8 271 29.5
ECA240G3255 Erigeron canadensis HOM05D000100 ORTHO05D000052 8.1e-09 67.0 164 33.5
HanXRQChr17g0536451 Helianthus annuus HOM05D001243 ORTHO05D000843 8.1e-09 67.0 149 36.2
HanXRQChr17g0536611 Helianthus annuus HOM05D001243 ORTHO05D000843 8.1e-09 67.0 154 33.8
ECA236G5069 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.4e-08 66.2 270 28.5
HanXRQChr17g0536741 Helianthus annuus HOM05D001243 ORTHO05D000843 1.4e-08 66.2 210 28.6
Dinv10494 Davidia involucrata HOM05D001243 ORTHO05D000843 4.0e-08 64.7 168 33.9
Dinv10495 Davidia involucrata HOM05D001243 ORTHO05D000843 1.2e-07 63.2 180 32.8
ECA234G0860 Erigeron canadensis HOM05D002981 ORTHO05D003725 1.2e-07 63.2 226 28.3
ECA234G3157 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.2e-07 63.2 281 28.8
ECA234G1171 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.5e-07 62.8 202 28.2
ATR0317G062 Amborella trichopoda HOM05D007496 ORTHO05D009479 2.0e-07 62.4 164 29.3
ECA248G1592 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.6e-07 62.0 118 40.7
HanXRQChr05g0153951 Helianthus annuus HOM05D001243 ORTHO05D000843 2.6e-07 62.0 129 38.0
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 3.4e-07 61.6 82 36.6
HanXRQChr12g0361451 Helianthus annuus HOM05D001243 ORTHO05D000843 5.8e-07 60.8 161 33.5
ECA240G1562 Erigeron canadensis HOM05D001243 ORTHO05D000843 9.9e-07 60.1 134 35.1
ECA246G1314 Erigeron canadensis HOM05D001243 ORTHO05D000843 9.9e-07 60.1 283 31.4
Lsat_1_v5_gn_3_22861 Lactuca sativa HOM05D001243 ORTHO05D000843 9.9e-07 60.1 193 29.5
Dinv09867 Davidia involucrata HOM05D001243 ORTHO05D000843 1.7e-06 59.3 167 31.1
ECA246G2697 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.9e-06 58.5 209 33.0
HanXRQChr17g0538321 Helianthus annuus HOM05D001243 ORTHO05D000843 3.8e-06 58.2 141 33.3
HanXRQChr17g0536881 Helianthus annuus HOM05D001243 ORTHO05D000843 4.9e-06 57.8 218 28.4


User provided reference genes

Program Settings