Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 0.0e+00 1146.0 587 100.0
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 2.2e-167 593.2 590 56.8
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 4.1e-166 589.0 590 55.9
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.2e-157 560.8 602 53.8
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 3.3e-147 526.2 602 51.7
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 3.6e-146 522.7 632 49.2
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 3.1e-145 519.6 617 50.2
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 7.1e-142 508.4 614 51.1
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.2e-141 507.7 613 49.8
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 1.3e-135 487.6 620 46.8
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 5.5e-134 482.3 616 46.9
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 9.3e-134 481.5 614 47.4
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 2.7e-133 479.9 616 47.4
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.6e-133 479.2 619 47.0
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 3.9e-132 476.1 601 48.3
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.1e-131 474.6 622 46.1
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 6.2e-130 468.8 611 47.0
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.8e-129 467.2 620 46.6
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 6.9e-129 465.3 616 46.4
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 1.5e-128 464.2 625 45.6
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 2.0e-128 463.8 661 44.9
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 4.9e-127 459.1 610 45.1
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.6e-125 454.1 607 45.3
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 2.7e-125 453.4 607 45.3
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 7.9e-125 451.8 635 43.8
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 3.0e-124 449.9 622 45.0
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 3.0e-124 449.9 607 46.5
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 6.7e-124 448.7 608 45.1
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.9e-123 447.2 614 46.4
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 3.3e-123 446.4 618 45.5
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 1.3e-122 444.5 620 43.9
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 3.7e-122 443.0 616 44.2
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 1.1e-121 441.4 628 43.3
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.2e-120 438.0 615 45.4
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 5.9e-120 435.6 618 43.7
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.7e-119 434.1 614 44.6
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 6.5e-119 432.2 607 44.6
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 8.4e-119 431.8 621 43.3
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 8.4e-119 431.8 585 45.0
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 1.4e-118 431.0 604 44.5
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 1.4e-118 431.0 615 44.7
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 4.2e-118 429.5 613 44.7
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 5.5e-118 429.1 621 42.7
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 7.2e-118 428.7 638 43.9
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 2.7e-117 426.8 632 43.2
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 3.0e-116 423.3 592 44.6
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 3.9e-116 422.9 600 44.3
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 3.9e-116 422.9 622 42.9
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 5.1e-116 422.5 618 43.4
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 6.7e-116 422.2 624 43.1
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 8.7e-116 421.8 622 42.8
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 4.3e-115 419.5 595 44.2
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.7e-115 418.3 620 42.4
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 2.2e-114 417.2 617 43.6
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 4.8e-114 416.0 618 42.9
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 4.8e-114 416.0 597 42.9
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 1.1e-113 414.8 599 44.1
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 5.3e-113 412.5 614 43.6
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 6.9e-113 412.1 614 43.6
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 9.0e-113 411.8 614 42.8
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 1.5e-112 411.0 615 44.1
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 2.6e-112 410.2 666 40.8
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 5.9e-112 409.1 613 43.2
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 7.7e-112 408.7 484 51.4
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 2.9e-111 406.8 601 43.3
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 1.1e-110 404.8 604 43.5
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.4e-110 404.4 606 42.2
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.9e-110 404.1 611 42.2
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 4.2e-110 402.9 612 41.7
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 5.5e-110 402.5 624 41.7
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 5.5e-110 402.5 620 41.3
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 5.5e-110 402.5 610 41.8
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 1.2e-109 401.4 610 42.1
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 1.6e-109 401.0 602 42.7
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 2.1e-109 400.6 630 41.7
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 2.3e-108 397.1 629 41.2
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.0e-108 396.7 620 41.1
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 1.5e-107 394.4 608 41.6
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 1.5e-107 394.4 609 42.5
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 2.6e-107 393.7 605 43.5
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 1.3e-106 391.3 618 41.4
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.2e-106 390.6 600 43.0
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 2.8e-106 390.2 615 39.7
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.8e-105 387.5 650 40.3
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 2.0e-104 384.0 604 39.1
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 3.4e-104 383.3 618 41.6
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 5.9e-104 382.5 618 39.2
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 5.9e-104 382.5 619 38.9
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.9e-104 382.5 618 42.6
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 5.9e-104 382.5 615 39.3
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 7.7e-104 382.1 612 40.5
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 5.0e-103 379.4 613 39.0
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 6.5e-103 379.0 620 40.5
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 1.1e-102 378.3 619 41.4
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 4.2e-102 376.3 606 41.3
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 7.2e-102 375.6 613 40.5
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 9.4e-102 375.2 610 38.0
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 1.6e-101 374.4 609 38.8
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 1.6e-101 374.4 611 39.1
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 1.6e-101 374.4 618 40.8
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.6e-101 374.4 395 51.4
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 2.7e-101 373.6 611 39.6
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 3.6e-101 373.2 639 40.8
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.7e-101 372.9 613 40.1
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 6.1e-101 372.5 604 39.2
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 7.9e-101 372.1 608 40.5
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 2.0e-99 367.5 604 39.2
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 2.6e-99 367.1 616 40.6
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 7.4e-99 365.5 643 38.4
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 1.3e-98 364.8 613 40.6
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 2.2e-98 364.0 619 38.9
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 3.7e-98 363.2 604 38.9
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 8.2e-98 362.1 643 38.4
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 5.3e-97 359.4 624 37.8
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 2.6e-96 357.1 633 38.2
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 3.5e-96 356.7 608 38.2
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 5.9e-96 355.9 608 38.2
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 3.8e-95 353.2 619 37.3
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 4.4e-91 339.7 548 41.4
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 4.4e-91 339.7 614 38.4
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 3.7e-90 336.7 419 49.6
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 4.1e-89 333.2 485 42.9
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 4.5e-88 329.7 544 40.3
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 1.3e-87 328.2 600 38.8
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 2.5e-86 323.9 618 37.1
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 1.6e-80 304.7 466 43.1
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 4.5e-80 303.1 565 37.3
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 5.9e-80 302.8 247 61.1
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 7.7e-80 302.4 322 52.2
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 5.2e-76 289.7 339 49.6
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 4.5e-72 276.6 353 47.0
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 4.4e-67 260.0 456 40.6
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 4.0e-60 236.9 277 45.5
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 6.4e-58 229.6 238 49.6
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 2.0e-56 224.6 615 30.1
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.3e-54 217.2 353 42.2
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.3e-54 216.9 381 42.0
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 3.6e-53 213.8 492 35.8
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.2e-51 208.8 446 32.7
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 2.9e-50 204.1 363 34.7
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 1.4e-49 201.8 245 51.0
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 7.1e-49 199.5 200 52.0
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 8.6e-47 192.6 620 28.4
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 3.3e-46 190.7 577 29.5
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 2.3e-44 184.5 375 37.6
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.3e-39 167.9 179 53.1
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.2e-37 162.2 319 39.2
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 3.1e-36 157.5 311 40.5
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 8.4e-34 149.4 233 39.5
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 6.6e-31 139.8 369 30.6
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.6e-27 127.9 95 63.2
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 3.2e-25 120.9 113 56.6
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 3.9e-23 114.0 233 37.8
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.1e-22 112.5 239 36.4
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 4.5e-19 100.5 265 32.8
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 2.9e-18 97.8 249 35.3
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.4e-17 94.7 224 36.6
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 7.4e-14 83.2 261 30.7
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 6.2e-13 80.1 249 31.7
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.4e-12 79.0 238 30.3
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 2.4e-12 78.2 293 25.9
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 3.1e-12 77.8 82 47.6
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 6.9e-12 76.6 96 42.7
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 2.9e-10 71.2 87 43.7
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 7.1e-09 66.6 185 31.9
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 1.0e-07 62.8 189 25.9


User provided reference genes

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