Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.7e-216 755.7 386 100.0
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 7.4e-172 607.4 392 81.1
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 9.3e-167 590.5 387 78.0
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.5e-159 565.8 326 85.9
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 7.0e-114 414.8 316 66.5
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 1.7e-112 410.2 302 65.6
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.5e-111 407.1 310 64.5
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 6.0e-105 385.2 308 62.3
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 3.9e-104 382.5 315 59.7
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 7.3e-103 378.3 315 59.4
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.6e-102 377.1 309 59.2
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 2.1e-102 376.7 305 60.7
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 1.4e-101 374.0 314 58.6
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 8.9e-101 371.3 314 58.3
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 8.9e-101 371.3 314 58.3
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.4e-100 369.0 313 57.5
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 7.5e-100 368.2 317 58.4
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 3.2e-98 362.8 306 58.8
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.2e-97 360.9 314 55.7
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.7e-96 357.1 297 60.6
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 2.3e-96 356.7 317 58.4
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 5.1e-96 355.5 297 60.3
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 6.6e-96 355.1 307 57.0
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 1.2e-94 350.9 301 58.5
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.6e-94 350.5 297 59.6
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 2.8e-94 349.7 301 58.5
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 3.6e-94 349.4 297 60.9
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 6.2e-94 348.6 301 57.8
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 6.2e-94 348.6 266 63.9
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 1.8e-93 347.1 318 55.0
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 6.8e-93 345.1 301 56.1
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 8.9e-93 344.7 309 59.5
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.2e-92 344.4 316 56.6
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.6e-92 343.2 300 58.7
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 2.6e-92 343.2 315 56.5
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 2.6e-92 343.2 306 56.2
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.6e-92 343.2 300 57.3
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 2.2e-91 340.1 308 55.5
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 2.9e-91 339.7 309 53.4
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 3.8e-91 339.3 302 56.0
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 6.4e-91 338.6 316 53.8
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.1e-90 337.8 375 50.7
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 2.1e-89 333.6 304 56.6
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 2.7e-89 333.2 371 50.4
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.0e-88 331.3 307 55.4
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.3e-88 330.9 308 54.2
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.3e-88 330.9 288 57.3
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 2.3e-88 330.1 225 68.4
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 5.1e-88 328.9 307 55.4
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 5.1e-88 328.9 301 57.1
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 6.6e-88 328.6 310 52.6
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.5e-87 327.4 325 54.2
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.9e-87 327.0 307 54.7
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.9e-87 327.0 315 54.6
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 3.3e-87 326.2 307 55.0
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 3.3e-87 326.2 298 55.0
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 4.3e-87 325.9 321 52.6
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 2.8e-86 323.2 315 50.2
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.8e-86 323.2 301 54.5
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 2.8e-86 323.2 303 54.1
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 6.2e-86 322.0 299 55.9
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 6.2e-86 322.0 316 51.6
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.4e-85 320.1 309 52.4
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 3.1e-85 319.7 295 55.3
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 3.1e-85 319.7 303 53.1
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 5.2e-85 318.9 298 54.7
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 5.2e-85 318.9 306 52.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.0e-85 318.2 329 51.7
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 9.0e-85 318.2 310 52.9
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.5e-84 317.4 308 53.6
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.6e-84 316.6 308 52.6
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 2.6e-84 316.6 298 54.7
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 4.4e-84 315.8 320 50.0
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 5.8e-84 315.5 294 52.0
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.7e-83 313.9 314 53.2
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.9e-83 313.2 310 52.3
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 3.8e-83 312.8 325 51.7
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.1e-82 311.2 322 51.2
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.4e-82 310.1 296 53.7
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 5.4e-82 308.9 295 53.2
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.2e-81 307.8 295 52.2
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.6e-81 307.4 295 52.9
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 3.5e-81 306.2 296 53.0
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 4.6e-81 305.8 295 52.9
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 6.0e-81 305.4 295 52.5
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 5.1e-80 302.4 311 51.1
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 6.6e-80 302.0 311 50.8
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.3e-79 299.3 304 50.3
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 2.8e-78 296.6 333 48.6
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.8e-78 296.6 268 57.5
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 2.4e-77 293.5 330 49.1
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 2.0e-76 290.4 314 49.7
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 9.9e-76 288.1 296 50.3
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 8.4e-75 285.0 320 49.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.7e-73 280.0 328 49.4
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.3e-72 277.7 390 43.6
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.8e-72 277.3 333 48.6
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 8.7e-72 275.0 339 47.8
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 2.4e-69 266.9 298 49.3
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.3e-64 251.1 260 51.5
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.1e-58 231.5 218 55.0
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 8.2e-54 215.3 193 54.9
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.7e-51 207.6 245 43.7
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 6.7e-48 195.7 178 55.1
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.2e-46 190.7 310 38.1
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 3.7e-46 189.9 313 37.4
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.1e-45 188.3 309 37.9
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.5e-44 184.5 310 37.4
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.8e-40 168.7 209 43.5
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-39 167.2 209 43.1
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 7.4e-39 165.6 216 37.5
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 3.1e-37 160.2 210 43.3
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-36 158.3 453 28.9
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.5e-36 156.8 209 40.7
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.7e-36 155.6 203 43.3
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.5e-35 152.5 212 41.0
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-34 151.8 208 38.5
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 9.4e-34 148.7 195 43.1
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.0e-32 143.7 208 37.0
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.5e-27 125.9 373 28.7
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 1.9e-26 124.4 164 40.2
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.8e-24 117.9 120 49.2
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.8e-22 109.8 85 58.8
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 9.1e-21 105.5 110 51.8
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.2e-20 105.1 118 46.6
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 5.4e-13 79.7 89 52.8


User provided reference genes

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