Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.1e-176 623.2 325 100.0
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 3.6e-95 352.4 332 63.0
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 8.7e-57 224.9 355 42.8
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 1.4e-51 207.6 349 43.3
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 2.3e-49 200.3 352 44.9
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.2e-44 183.7 329 42.2
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.1e-40 171.4 341 41.9
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 1.8e-38 164.1 317 43.5
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 7.6e-37 158.7 334 39.5
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 1.9e-35 154.1 330 41.2
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.9e-35 154.1 331 39.6
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 3.2e-35 153.3 329 41.0
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 9.3e-35 151.8 247 45.3
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 4.6e-34 149.4 325 41.5
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 7.9e-34 148.7 327 40.1
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.9e-33 146.4 331 38.7
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.9e-33 146.4 317 38.2
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.9e-33 146.4 250 43.6
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 5.1e-33 146.0 316 37.7
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 1.1e-32 144.8 337 36.5
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.1e-32 144.8 325 37.5
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.1e-32 144.8 325 37.5
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 1.5e-32 144.4 337 38.0
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.5e-32 144.4 340 36.2
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 2.5e-32 143.7 340 37.1
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.2e-31 140.6 333 38.1
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 3.7e-31 139.8 339 36.9
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 4.8e-31 139.4 331 39.0
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 6.3e-31 139.0 336 36.3
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 4.1e-30 136.3 343 37.6
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 9.1e-30 135.2 345 36.8
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 9.1e-30 135.2 345 36.8
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.5e-29 134.4 333 36.9
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.5e-29 134.4 340 38.5
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.5e-29 134.4 330 38.2
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 2.6e-29 133.7 323 38.7
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 4.5e-29 132.9 340 37.6
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 5.9e-29 132.5 345 34.8
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 7.7e-29 132.1 324 38.0
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 1.0e-28 131.7 329 36.8
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.0e-28 131.7 336 35.4
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 1.3e-28 131.3 337 37.1
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.3e-28 131.3 345 36.5
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.7e-28 131.0 339 38.6
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 1.7e-28 131.0 346 36.1
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 2.2e-28 130.6 342 35.7
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 3.8e-28 129.8 343 35.9
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 6.5e-28 129.0 352 34.7
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 1.1e-27 128.3 342 36.3
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 2.5e-27 127.1 339 35.7
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 9.4e-27 125.2 346 35.8
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.2e-26 124.8 322 36.6
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 1.2e-26 124.8 332 37.3
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.2e-26 124.8 346 34.1
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 2.7e-26 123.6 303 37.6
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 2.7e-26 123.6 350 36.6
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 3.6e-26 123.2 333 36.0
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 6.1e-26 122.5 318 37.1
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 6.1e-26 122.5 322 36.3
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.0e-25 121.7 347 36.0
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.4e-25 121.3 330 35.5
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 1.4e-25 121.3 348 35.9
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.3e-25 120.6 340 36.2
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 2.3e-25 120.6 322 36.3
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.0e-25 120.2 314 38.9
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 3.0e-25 120.2 325 36.0
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 3.9e-25 119.8 330 34.2
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 3.9e-25 119.8 330 34.2
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 5.1e-25 119.4 354 34.2
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 6.7e-25 119.0 346 37.3
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 1.1e-24 118.2 331 33.2
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 1.1e-24 118.2 351 32.5
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 2.6e-24 117.1 351 35.3
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 4.4e-24 116.3 338 34.9
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 7.4e-24 115.5 330 34.5
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.7e-24 115.2 334 36.2
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 1.3e-23 114.8 334 35.9
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.3e-23 114.8 334 35.9
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 1.3e-23 114.8 208 42.8
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 1.3e-23 114.8 323 34.4
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.7e-23 114.4 316 34.5
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 1.7e-23 114.4 328 32.9
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 3.7e-23 113.2 342 36.0
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 6.3e-23 112.5 345 36.5
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.8e-22 110.9 334 35.3
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 4.1e-22 109.8 334 35.0
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 9.1e-22 108.6 346 34.4
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.5e-21 107.8 236 40.3
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 2.0e-21 107.5 342 33.9
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 2.0e-21 107.5 338 35.5
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 4.5e-21 106.3 341 35.2
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 4.5e-21 106.3 304 34.5
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 2.9e-20 103.6 320 34.4
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 3.8e-20 103.2 335 34.6
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 3.8e-20 103.2 380 31.6
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 3.8e-20 103.2 335 33.7
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 5.0e-20 102.8 337 35.0
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 8.5e-20 102.1 319 34.2
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 8.5e-20 102.1 383 30.5
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 7.2e-19 99.0 317 34.1
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 3.6e-18 96.7 275 35.3
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 7.9e-18 95.5 320 33.4
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.4e-17 94.7 331 32.0
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.5e-16 91.3 311 32.8
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 2.0e-16 90.9 334 29.9
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 6.3e-15 85.9 331 32.0
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.8e-14 84.3 357 31.1
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 5.3e-14 82.8 310 31.0
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 7.0e-14 82.4 333 34.2
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 2.0e-13 80.9 333 28.8
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 3.5e-13 80.1 326 30.1
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-13 79.7 333 29.4
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-13 79.7 333 29.4
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.5e-13 79.7 333 29.4
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 5.9e-13 79.3 359 28.7
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 1.7e-12 77.8 338 32.8
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.2e-12 77.4 300 31.7
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 2.2e-12 77.4 327 31.2
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.5e-11 74.7 211 36.0
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 1.9e-11 74.3 194 35.6
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 5.5e-11 72.8 328 31.7
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 1.2e-10 71.6 327 32.4
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.6e-10 71.2 349 28.7
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.7e-10 70.5 321 33.3
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 6.1e-10 69.3 320 29.7
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 5.2e-09 66.2 307 27.4
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 2.6e-08 63.9 340 29.1
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 3.3e-08 63.5 347 28.0
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 5.7e-08 62.8 342 27.8
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 5.7e-08 62.8 331 28.4
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 1.7e-07 61.2 337 29.1
PSO210G0965 Papaver somniferum HOM05D001488 ORTHO05D001456 2.2e-07 60.8 236 30.1
Aqoxy1G01010 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 2.8e-07 60.5 279 30.1
Aqoxy7G01095 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 2.8e-07 60.5 279 30.1
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 2.8e-07 60.5 342 27.5
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 2.8e-07 60.5 295 29.5
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 3.7e-07 60.1 328 29.0
Oeu058721.1 Olea europaea HOM05D001488 ORTHO05D001456 4.8e-07 59.7 250 29.2
Rhsim08G0237500 Rhododendron simsii HOM05D001488 ORTHO05D001456 4.8e-07 59.7 230 33.0
PSO210G7252 Papaver somniferum HOM05D001488 ORTHO05D001456 8.2e-07 58.9 231 32.9
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 2.4e-06 57.4 297 30.6
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 3.1e-06 57.0 339 27.1
AL5G21160 Arabidopsis lyrata HOM05D001488 ORTHO05D001456 5.3e-06 56.2 229 28.8
MELO3C025811.2 Cucumis melo HOM05D001488 ORTHO05D001456 5.3e-06 56.2 221 32.6
Potri.006G144700 Populus trichocarpa HOM05D001488 ORTHO05D001456 5.3e-06 56.2 224 28.1
Solyc08g062180.3 Solanum lycopersicum HOM05D001488 ORTHO05D001456 5.3e-06 56.2 250 30.0
SGA_v2.0_scaffold71G23864 Striga asiatica HOM05D001488 ORTHO05D001456 7.0e-06 55.8 232 28.9
TWI32G0337 Tripterygium wilfordii HOM05D001488 ORTHO05D001456 9.1e-06 55.5 245 29.0


User provided reference genes

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