Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5500 Erigeron canadensis HOM05D000507 ORTHO05D188408 1.4e-84 316.2 159 100.0
ECA232G4078 Erigeron canadensis HOM05D000507 ORTHO05D000416 1.7e-26 123.2 232 36.2
Lsat_1_v5_gn_0_16841 Lactuca sativa HOM05D000507 ORTHO05D000416 3.0e-26 122.5 233 35.6
HanXRQChr05g0147031 Helianthus annuus HOM05D000507 ORTHO05D000416 1.6e-24 116.7 233 34.3
Lsat_1_v5_gn_2_102421 Lactuca sativa HOM05D000507 ORTHO05D000416 3.4e-22 109.0 234 34.6
ECA238G3702 Erigeron canadensis HOM05D000507 ORTHO05D000416 1.1e-20 104.0 233 32.6
ClCG08G008110 Citrullus lanatus HOM05D000507 ORTHO05D000416 3.2e-20 102.4 233 30.9
Aqoxy2G01374 Aquilegia oxysepala HOM05D000507 ORTHO05D000416 6.0e-19 98.2 245 31.8
unitig_749.g14011 Utricularia gibba HOM05D000507 ORTHO05D000416 7.8e-19 97.8 233 30.9
Actinidia06705 Actinidia chinensis HOM05D000507 ORTHO05D000416 1.3e-18 97.1 185 34.6
PSO384G0207 Papaver somniferum HOM05D000507 ORTHO05D000416 1.7e-18 96.7 234 31.2
MELO3C019884.2 Cucumis melo HOM05D000507 ORTHO05D000416 3.9e-18 95.5 233 29.2
Migut.F01655 Erythranthe guttata HOM05D000507 ORTHO05D000416 3.9e-18 95.5 234 31.6
Sed0001507 Sechium edule HOM05D000507 ORTHO05D000416 8.7e-18 94.4 233 30.0
Sopen05g033840 Solanum pennellii HOM05D000507 ORTHO05D000416 8.7e-18 94.4 233 30.5
Haze_02600 Corylus avellana HOM05D000507 ORTHO05D000416 1.1e-17 94.0 234 31.2
CsaV3_6G004090 Cucumis sativus L. HOM05D000507 ORTHO05D000416 1.1e-17 94.0 233 29.2
Solyc05g055400.4 Solanum lycopersicum HOM05D000507 ORTHO05D000416 1.1e-17 94.0 233 30.0
Ciclev10031286m.g Citrus clementina HOM05D000507 ORTHO05D000416 1.5e-17 93.6 233 28.8
Peaxi162Scf00004g00019 Petunia axillaris HOM05D000507 ORTHO05D000416 1.5e-17 93.6 233 28.3
Cfa011228 Carpinus fangiana HOM05D000507 ORTHO05D000416 1.9e-17 93.2 233 30.5
Eucgr.J01011 Eucalyptus grandis HOM05D000507 ORTHO05D000416 1.9e-17 93.2 233 28.3
Dinv30652 Davidia involucrata HOM05D000507 ORTHO05D000416 2.5e-17 92.8 234 30.8
Nitab4.5_0000096g0120 Nicotiana tabacum HOM05D000507 ORTHO05D000416 2.5e-17 92.8 233 28.3
CiPaw.13G036500 Carya illinoinensis HOM05D000507 ORTHO05D000416 4.3e-17 92.0 233 30.0
Hma1.2p1_0352F.1_g133060 Hydrangea macrophylla HOM05D000507 ORTHO05D000416 4.3e-17 92.0 236 28.8
Lj2C27T15 Lonicera japonica HOM05D000507 ORTHO05D000416 4.3e-17 92.0 234 31.2
Lj3A931T45 Lonicera japonica HOM05D000507 ORTHO05D000416 4.3e-17 92.0 235 31.1
Nn2g14034 Nelumbo nucifera HOM05D000507 ORTHO05D000416 4.3e-17 92.0 234 29.5
PSO443G0012 Papaver somniferum HOM05D000507 ORTHO05D000416 4.3e-17 92.0 234 29.9
GSVIVG01034704001 Vitis vinifera HOM05D000507 ORTHO05D000416 5.6e-17 91.7 233 28.3
SalBow6G1244 Salvia bowleyana HOM05D000507 ORTHO05D000416 7.3e-17 91.3 233 28.8
CSS0002756 Camellia sinensis var. sinensis HOM05D000507 ORTHO05D000416 9.6e-17 90.9 233 29.6
CSS0031915 Camellia sinensis var. sinensis HOM05D000507 ORTHO05D000416 9.6e-17 90.9 233 29.6
SalBow4G1504 Salvia bowleyana HOM05D000507 ORTHO05D000416 9.6e-17 90.9 227 29.5
MD02G1247800 Malus domestica HOM05D000507 ORTHO05D000416 1.3e-16 90.5 233 29.6
PGSC0003DMG400023382 Solanum tuberosum HOM05D000507 ORTHO05D000416 1.3e-16 90.5 233 28.8
Nitab4.5_0007922g0030 Nicotiana tabacum HOM05D000507 ORTHO05D000416 2.1e-16 89.7 233 27.9
MSTRG.414 Avicennia marina HOM05D000507 ORTHO05D000416 2.8e-16 89.4 233 28.3
MELO3C012364.2 Cucumis melo HOM05D000507 ORTHO05D000416 2.8e-16 89.4 195 32.3
DCAR_006370 Daucus carota HOM05D000507 ORTHO05D000416 3.6e-16 89.0 229 29.3
THA.LOC104823189 Tarenaya hassleriana HOM05D000507 ORTHO05D000416 3.6e-16 89.0 233 28.3
TAR284G0003 Trochodendron aralioides HOM05D000507 ORTHO05D000416 3.6e-16 89.0 233 27.5
TAR369G0104 Trochodendron aralioides HOM05D000507 ORTHO05D000416 3.6e-16 89.0 233 27.5
CAN.G1550.14 Capsicum annuum HOM05D000507 ORTHO05D000416 4.8e-16 88.6 233 28.8
Atru.chr12.972 Acer truncatum HOM05D000507 ORTHO05D000416 6.2e-16 88.2 234 27.4
Peaxi162Scf00244g00062 Petunia axillaris HOM05D000507 ORTHO05D000416 6.2e-16 88.2 234 28.2
Potri.008G025500 Populus trichocarpa HOM05D000507 ORTHO05D000416 6.2e-16 88.2 233 27.5
Cc02_g10080 Coffea canephora HOM05D000507 ORTHO05D000416 8.1e-16 87.8 233 27.5
Gohir.D10G204800 Gossypium hirsutum HOM05D000507 ORTHO05D000416 8.1e-16 87.8 233 28.8
Gorai.011G229800 Gossypium raimondii HOM05D000507 ORTHO05D000416 8.1e-16 87.8 233 28.8
VMungo0720G2560 Vigna mungo HOM05D000507 ORTHO05D000416 8.1e-16 87.8 233 27.0
DCAR_019013 Daucus carota HOM05D000507 ORTHO05D000416 1.1e-15 87.4 234 30.8
TAR623G1483 Trochodendron aralioides HOM05D000507 ORTHO05D000416 1.1e-15 87.4 233 27.5
Aa31LG3G3430 Aethionema arabicum HOM05D000507 ORTHO05D000416 1.4e-15 87.0 229 27.5
Solyc11g007540.2 Solanum lycopersicum HOM05D000507 ORTHO05D000416 1.4e-15 87.0 235 27.2
AL6G14280 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 1.8e-15 86.7 233 27.9
AT5G04660 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 1.8e-15 86.7 233 27.9
FAN01G0159 Fragaria x ananassa HOM05D000507 ORTHO05D000416 1.8e-15 86.7 233 29.2
Nn6g35029 Nelumbo nucifera HOM05D000507 ORTHO05D000416 1.8e-15 86.7 229 27.9
PGR044G1824 Punica granatum HOM05D000507 ORTHO05D000416 1.8e-15 86.7 233 28.8
Duzib128G1695 Durio zibethinus HOM05D000507 ORTHO05D000416 2.4e-15 86.3 233 27.9
FAN03G1756 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.4e-15 86.3 233 28.8
Gohir.A10G197700 Gossypium hirsutum HOM05D000507 ORTHO05D000416 2.4e-15 86.3 233 28.3
Sc20g0001260 Simmondsia chinensis HOM05D000507 ORTHO05D000416 2.4e-15 86.3 234 28.6
FvH4_7g05960 Fragaria vesca HOM05D000507 ORTHO05D000416 3.1e-15 85.9 233 28.8
FAN06G3035 Fragaria x ananassa HOM05D000507 ORTHO05D000416 3.1e-15 85.9 233 28.8
Sopen11g003380 Solanum pennellii HOM05D000507 ORTHO05D000416 3.1e-15 85.9 235 27.2
A03p01730 Brassica napus HOM05D000507 ORTHO05D000416 4.0e-15 85.5 229 28.4
BraA03t09548Z Brassica rapa HOM05D000507 ORTHO05D000416 4.0e-15 85.5 229 28.4
CAN.G135.78 Capsicum annuum HOM05D000507 ORTHO05D000416 4.0e-15 85.5 234 26.9
TWI38G1909 Tripterygium wilfordii HOM05D000507 ORTHO05D000416 4.0e-15 85.5 233 27.5
Aa31LG11G5490 Aethionema arabicum HOM05D000507 ORTHO05D000416 5.3e-15 85.1 234 27.8
BcaB01g05908 Brassica carinata HOM05D000507 ORTHO05D000416 5.3e-15 85.1 229 27.9
C03p02140 Brassica napus HOM05D000507 ORTHO05D000416 5.3e-15 85.1 229 27.9
CANSAT56G3984 Cannabis sativa HOM05D000507 ORTHO05D000416 5.3e-15 85.1 228 27.6
Duzib114G0924 Durio zibethinus HOM05D000507 ORTHO05D000416 5.3e-15 85.1 233 28.3
Phvul.007G104800 Phaseolus vulgaris HOM05D000507 ORTHO05D000416 5.3e-15 85.1 233 27.0
Rhsim03G0105900 Rhododendron simsii HOM05D000507 ORTHO05D000416 6.9e-15 84.7 234 29.1
COL.COLO4_33904 Corchorus olitorius HOM05D000507 ORTHO05D000416 9.0e-15 84.3 233 27.5
Glyma.10G202400 Glycine max HOM05D000507 ORTHO05D000416 9.0e-15 84.3 233 27.5
Glyma.20G188000 Glycine max HOM05D000507 ORTHO05D000416 9.0e-15 84.3 233 27.5
Sabra08G0017100 Salix brachista HOM05D000507 ORTHO05D000416 9.0e-15 84.3 232 27.2
BolC3t12766H Brassica oleracea HOM05D000507 ORTHO05D000416 1.2e-14 84.0 229 27.5
CARHR208640 Cardamine hirsuta HOM05D000507 ORTHO05D000416 1.2e-14 84.0 233 27.5
Gohir.D12G091200 Gossypium hirsutum HOM05D000507 ORTHO05D000416 1.2e-14 84.0 234 27.8
Gorai.008G098700 Gossypium raimondii HOM05D000507 ORTHO05D000416 1.2e-14 84.0 234 27.8
QL04p041297 Quercus lobata HOM05D000507 ORTHO05D000416 1.2e-14 84.0 118 40.7
QL04p041340 Quercus lobata HOM05D000507 ORTHO05D000416 1.2e-14 84.0 118 40.7
Gohir.A12G078100 Gossypium hirsutum HOM05D000507 ORTHO05D000416 1.5e-14 83.6 234 27.4
RcHm_v2.0_Chr1g0333181 Rosa chinensis HOM05D000507 ORTHO05D000416 1.5e-14 83.6 233 28.3
MD07G1068700 Malus domestica HOM05D000507 ORTHO05D000416 2.6e-14 82.8 233 28.8
Prupe.2G086300 Prunus persica HOM05D000507 ORTHO05D000416 2.6e-14 82.8 233 27.9
PGSC0003DMG400027340 Solanum tuberosum HOM05D000507 ORTHO05D000416 2.6e-14 82.8 235 26.8
Thecc.10G110500 Theobroma cacao HOM05D000507 ORTHO05D000416 2.6e-14 82.8 233 27.5
arahy.Tifrunner.gnm1.ann1.CNM5E0 Arachis hypogaea HOM05D000507 ORTHO05D000416 3.4e-14 82.4 233 27.9
arahy.Tifrunner.gnm1.ann1.E3VCX4 Arachis hypogaea HOM05D000507 ORTHO05D000416 3.4e-14 82.4 233 27.9
MBI01_g03735_MAGBIO Magnolia biondii HOM05D000507 ORTHO05D000416 4.4e-14 82.0 241 28.2
CARHR085090 Cardamine hirsuta HOM05D000507 ORTHO05D000416 5.8e-14 81.6 233 27.0
Ah.04g163670 Amaranthus hybridus HOM05D000507 ORTHO05D000416 7.6e-14 81.3 213 29.6
C09p72160 Brassica napus HOM05D000507 ORTHO05D000416 7.6e-14 81.3 229 25.8
BolC9t59960H Brassica oleracea HOM05D000507 ORTHO05D000416 7.6e-14 81.3 229 25.8
Oeu060260.1 Olea europaea HOM05D000507 ORTHO05D000416 7.6e-14 81.3 233 27.9
Sp6g38150 Schrenkiella parvula HOM05D000507 ORTHO05D000416 7.6e-14 81.3 234 28.2
HPP92_023004 Vanilla planifolia HOM05D000507 ORTHO05D000416 7.6e-14 81.3 233 28.3
Carub.0006s0356 Capsella rubella HOM05D000507 ORTHO05D000416 9.9e-14 80.9 233 26.6
SGA_v2.0_scaffold13G06473 Striga asiatica HOM05D000507 ORTHO05D000416 9.9e-14 80.9 229 28.8
Aqoxy4G02881 Aquilegia oxysepala HOM05D000507 ORTHO05D000416 1.3e-13 80.5 234 26.9
BcaC06g32176 Brassica carinata HOM05D000507 ORTHO05D000416 1.3e-13 80.5 233 25.8
Manes.07G091600 Manihot esculenta HOM05D000507 ORTHO05D000416 1.3e-13 80.5 233 25.8
Sabra08G0017200 Salix brachista HOM05D000507 ORTHO05D000416 1.3e-13 80.5 232 26.7
BcaC06g32175 Brassica carinata HOM05D000507 ORTHO05D000416 1.7e-13 80.1 233 25.8
unitig_37.g12334 Utricularia gibba HOM05D000507 ORTHO05D000416 1.7e-13 80.1 225 27.6
AT3G10560 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 2.2e-13 79.7 117 39.3
EL10Ac4g08674 Beta vulgaris HOM05D000507 ORTHO05D000416 2.2e-13 79.7 234 26.9
BcaC05g29448 Brassica carinata HOM05D000507 ORTHO05D000416 2.2e-13 79.7 233 26.2
Thhalv10016078m.g Eutrema salsugineum HOM05D000507 ORTHO05D000416 2.2e-13 79.7 233 27.5
C05p57480 Brassica napus HOM05D000507 ORTHO05D000416 2.9e-13 79.3 233 26.2
Thhalv10020529m.g Eutrema salsugineum HOM05D000507 ORTHO05D000416 2.9e-13 79.3 233 26.2
vmacro07225 Vaccinium macrocarpon HOM05D000507 ORTHO05D000416 2.9e-13 79.3 234 27.8
BcaNung06523 Brassica carinata HOM05D000507 ORTHO05D000416 3.8e-13 79.0 233 25.8
BolC5t34405H Brassica oleracea HOM05D000507 ORTHO05D000416 3.8e-13 79.0 233 26.2
Carub.0006s0355 Capsella rubella HOM05D000507 ORTHO05D000416 4.9e-13 78.6 117 37.6
Nitab4.5_0002259g0030 Nicotiana tabacum HOM05D000507 ORTHO05D000416 4.9e-13 78.6 117 39.3
unitig_46.g18616 Utricularia gibba HOM05D000507 ORTHO05D000416 4.9e-13 78.6 229 26.6
AL3G21990 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 6.4e-13 78.2 117 37.6
AT5G04630 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 6.4e-13 78.2 117 37.6
A10p31470 Brassica napus HOM05D000507 ORTHO05D000416 6.4e-13 78.2 233 25.3
BraA10t45193Z Brassica rapa HOM05D000507 ORTHO05D000416 6.4e-13 78.2 233 25.3
Ca_10495_v3 Cicer arietinum L. HOM05D000507 ORTHO05D000416 8.4e-13 77.8 234 26.5
Lj5g0025187 Lotus japonicus HOM05D000507 ORTHO05D000416 8.4e-13 77.8 233 25.8
Nitab4.5_0002259g0020 Nicotiana tabacum HOM05D000507 ORTHO05D000416 8.4e-13 77.8 117 38.5
Nitab4.5_0001807g0010 Nicotiana tabacum HOM05D000507 ORTHO05D000416 1.1e-12 77.4 117 38.5
BcaNung05853 Brassica carinata HOM05D000507 ORTHO05D000416 1.4e-12 77.0 230 27.0
Lalb_Chr03g0036361 Lupinus albus HOM05D000507 ORTHO05D000416 1.4e-12 77.0 233 27.0
Sp3g08860 Schrenkiella parvula HOM05D000507 ORTHO05D000416 1.4e-12 77.0 233 25.8
TWI63G0541 Tripterygium wilfordii HOM05D000507 ORTHO05D000416 1.4e-12 77.0 233 24.9
BraA05t22650Z Brassica rapa HOM05D000507 ORTHO05D000416 1.9e-12 76.6 233 25.8
AUR62024186 Chenopodium quinoa HOM05D000507 ORTHO05D000416 1.9e-12 76.6 235 27.2
Thhalv10022031m.g Eutrema salsugineum HOM05D000507 ORTHO05D000416 1.9e-12 76.6 117 37.6
A05p38590 Brassica napus HOM05D000507 ORTHO05D000416 2.4e-12 76.3 233 25.8
Os04g0407900 Oryza sativa ssp. japonica HOM05D000507 ORTHO05D000416 2.4e-12 76.3 115 40.0
Actinidia18580 Actinidia chinensis HOM05D000507 ORTHO05D000416 3.2e-12 75.9 118 38.1
Nitab4.5_0001807g0020 Nicotiana tabacum HOM05D000507 ORTHO05D000416 3.2e-12 75.9 117 39.3
Sp3g08850 Schrenkiella parvula HOM05D000507 ORTHO05D000416 3.2e-12 75.9 117 37.6
CARHR208660 Cardamine hirsuta HOM05D000507 ORTHO05D000416 4.2e-12 75.5 118 40.7
Carub.0003s0980 Capsella rubella HOM05D000507 ORTHO05D000416 5.4e-12 75.1 233 25.8
Psat6g176600 Pisum sativum HOM05D000507 ORTHO05D000416 5.4e-12 75.1 120 35.8
CsaV3_5G035630 Cucumis sativus L. HOM05D000507 ORTHO05D000416 7.1e-12 74.7 238 27.3
Lalb_Chr02g0151391 Lupinus albus HOM05D000507 ORTHO05D000416 7.1e-12 74.7 234 26.1
AL6G14260 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 9.3e-12 74.3 117 36.8
Oeu027976.1 Olea europaea HOM05D000507 ORTHO05D000416 1.2e-11 73.9 98 44.9
AUR62005547 Chenopodium quinoa HOM05D000507 ORTHO05D000416 2.7e-11 72.8 235 26.0
Cpa.g.sc128.44 Carica papaya HOM05D000507 ORTHO05D000416 4.6e-11 72.0 234 27.8
ClCG05G021600 Citrullus lanatus HOM05D000507 ORTHO05D000416 4.6e-11 72.0 117 38.5
Medtr1g492820 Medicago truncatula HOM05D000507 ORTHO05D000416 6.0e-11 71.6 120 34.2
Zm00001eb084190 Zea mays HOM05D000507 ORTHO05D000416 1.7e-10 70.1 115 36.5
PSO384G1763 Papaver somniferum HOM05D000507 ORTHO05D000416 3.0e-10 69.3 229 25.8
SEGI_21179 Sequoiadendron giganteum HOM05D000507 ORTHO05D000416 3.0e-10 69.3 120 37.5
SGA_v2.0_scaffold13G06490 Striga asiatica HOM05D000507 ORTHO05D000416 3.9e-10 68.9 225 26.7
TPR.G2557 Trifolium pratense HOM05D000507 ORTHO05D000416 5.1e-10 68.6 234 26.5
CDE06G2102 Ceratophyllum demersum HOM05D000507 ORTHO05D000416 6.6e-10 68.2 233 23.2
AL3G22000 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 8.7e-10 67.8 117 34.2
AT3G10570 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 8.7e-10 67.8 117 34.2
CDE08G1190 Ceratophyllum demersum HOM05D000507 ORTHO05D000416 1.1e-09 67.4 233 23.2
PSO339G3437 Papaver somniferum HOM05D000507 ORTHO05D000416 1.9e-09 66.6 228 25.9
MBI17_g20161_MAGBIO Magnolia biondii HOM05D000507 ORTHO05D000416 5.6e-09 65.1 229 26.2
Prupe.7G219700 Prunus persica HOM05D000507 ORTHO05D000416 1.6e-08 63.5 131 32.8
MBI17_g19806_MAGBIO Magnolia biondii HOM05D000507 ORTHO05D000416 2.8e-08 62.8 235 25.5
BcaC06g32174 Brassica carinata HOM05D000507 ORTHO05D000416 2.4e-07 59.7 180 25.0
SalBow1G1051 Salvia bowleyana HOM05D000507 ORTHO05D000416 2.4e-07 59.7 86 38.4
arahy.Tifrunner.gnm1.ann1.L13TAJ Arachis hypogaea HOM05D000507 ORTHO05D000416 3.1e-07 59.3 156 28.8
CSS0028162 Camellia sinensis var. sinensis HOM05D000507 ORTHO05D000416 4.0e-07 58.9 129 31.0
ATR0820G270 Amborella trichopoda HOM05D000507 ORTHO05D000416 5.3e-07 58.5 98 39.8
BcaNung06522 Brassica carinata HOM05D000507 ORTHO05D000416 9.0e-07 57.8 94 33.0
Sed0001855 Sechium edule HOM05D000507 ORTHO05D000416 1.2e-06 57.4 211 25.1
Sc20g0001280 Simmondsia chinensis HOM05D000507 ORTHO05D000416 2.6e-06 56.2 92 35.9
Potri.004G019000 Populus trichocarpa HOM05D000507 ORTHO05D000416 7.6e-06 54.7 161 30.4
SEGI_18973 Sequoiadendron giganteum HOM05D000507 ORTHO05D000416 9.9e-06 54.3 136 27.9


User provided reference genes

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