Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.0e-49 198.7 99 100.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.3e-40 168.7 93 83.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 5.0e-40 167.5 97 83.5
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.5e-39 166.0 93 86.0
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.2e-38 162.9 97 80.4
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.1e-38 162.2 97 78.4
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 2.8e-38 161.8 97 81.4
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.7e-38 161.0 94 81.9
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 94 81.9
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 5.2e-37 157.5 95 78.9
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 5.2e-37 157.5 97 77.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 6.8e-37 157.1 92 79.3
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 8.8e-37 156.8 95 78.9
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.2e-36 156.4 97 78.4
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.2e-36 156.4 97 79.4
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.2e-36 156.4 97 79.4
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 3.7e-35 151.4 92 78.3
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 4.9e-35 151.0 99 74.7
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 6.3e-35 150.6 94 78.7
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 8.3e-35 150.2 97 71.1
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.1e-34 149.8 94 78.7
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 94 78.7
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 71.1
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.4e-34 149.4 98 74.5
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.8e-34 149.1 100 73.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-34 149.1 100 73.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-34 149.1 100 73.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.8e-34 149.1 100 73.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 3.1e-34 148.3 99 74.7
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 3.1e-34 148.3 95 73.7
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 4.1e-34 147.9 97 74.2
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-34 147.9 94 75.5
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-34 147.9 94 75.5
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.1e-34 147.9 94 75.5
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.4e-34 147.5 88 78.4
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.2e-33 146.4 95 75.8
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.6e-33 146.0 100 72.0
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.6e-33 146.0 90 74.4
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 2.7e-33 145.2 98 74.5
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 2.7e-33 145.2 95 69.5
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 3.5e-33 144.8 91 78.0
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.5e-33 144.8 98 73.5
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 4.5e-33 144.4 93 74.2
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 4.5e-33 144.4 92 77.2
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.5e-33 144.4 96 76.0
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 5.9e-33 144.1 90 74.4
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 71.9
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 7.8e-33 143.7 93 75.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.7e-32 142.5 93 73.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.3e-32 142.1 91 74.7
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.3e-32 142.1 121 62.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.9e-32 141.7 97 71.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.8e-32 141.4 96 72.9
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 5.0e-32 141.0 95 73.7
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 6.6e-32 140.6 94 73.4
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 8.6e-32 140.2 95 68.4
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.1e-31 139.8 95 71.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.5e-31 139.4 91 70.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.5e-31 139.4 94 71.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.5e-31 139.4 103 67.0
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.9e-31 139.0 97 70.1
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.5e-31 138.7 95 71.6
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 3.3e-31 138.3 94 69.1
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.3e-31 138.3 99 69.7
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 3.3e-31 138.3 91 72.5
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 4.3e-31 137.9 89 74.2
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.6e-31 137.5 95 67.4
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 7.3e-31 137.1 97 68.0
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 9.5e-31 136.7 92 69.6
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.2e-30 136.3 96 66.7
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.6e-30 136.0 94 68.1
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.6e-30 134.8 95 68.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 6.1e-30 134.0 90 71.1
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 6.1e-30 134.0 94 69.1
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 6.1e-30 134.0 89 69.7
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 8.0e-30 133.7 95 68.4
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 8.0e-30 133.7 95 67.4
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.0e-29 133.3 96 64.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.4e-29 132.9 95 68.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.0e-29 131.7 95 68.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 70.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 70.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 70.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 70.3
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 3.0e-29 131.7 97 62.9
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 5.2e-29 131.0 103 66.0
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.8e-29 130.6 91 69.2
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 2.0e-28 129.0 92 68.5
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 2.0e-28 129.0 92 68.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.0e-28 129.0 86 74.4
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 2.6e-28 128.6 92 68.5
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 4.4e-28 127.9 92 68.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 4.4e-28 127.9 92 68.5
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-27 126.3 92 68.5
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.9e-27 125.2 93 72.0
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.7e-27 124.8 79 72.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 8.3e-27 123.6 72 79.2
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 8.3e-27 123.6 79 73.4
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 4.1e-26 121.3 93 61.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 4.1e-26 121.3 93 65.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 5.4e-26 120.9 79 70.9
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 4.6e-25 117.9 79 73.4
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 7.3e-23 110.5 80 65.0
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 9.5e-23 110.2 104 58.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.2e-22 109.8 83 65.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.3e-21 105.5 79 69.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 3.4e-20 101.7 85 54.1
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 8.3e-19 97.1 85 57.6
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.4e-18 96.3 71 66.2
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 7.8e-17 90.5 90 51.1
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 3.9e-16 88.2 85 51.8
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.5e-15 86.3 98 48.0
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.8e-14 82.0 115 44.3
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.4e-12 74.7 46 71.7
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 4.9e-11 71.2 70 51.4
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.1e-10 70.1 54 61.1
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-08 63.5 38 71.1
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 3.0e-08 62.0 58 51.7
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 2.5e-07 58.9 40 75.0


User provided reference genes

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