Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 2.4e-61 238.8 135 100.0
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.0e-27 127.1 106 59.4
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 3.0e-27 125.6 114 58.8
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 9.3e-21 104.0 122 45.1
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 2.3e-19 99.4 117 45.3
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 8.7e-19 97.4 130 44.6
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 3.3e-18 95.5 114 52.6
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 7.4e-18 94.4 107 47.7
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 4.8e-17 91.7 77 55.8
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.4e-16 90.1 121 44.6
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.8e-16 89.7 121 43.8
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.8e-16 89.7 121 43.8
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 3.1e-16 89.0 118 45.8
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.2e-15 87.0 112 44.6
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 1.5e-15 86.7 112 46.4
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.0e-15 86.3 116 44.8
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.3e-14 83.6 124 48.4
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.3e-14 83.6 121 39.7
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 1.7e-14 83.2 118 41.5
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 2.2e-14 82.8 122 42.6
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 1.4e-13 80.1 117 41.9
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 1.4e-13 80.1 65 58.5
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 1.9e-13 79.7 126 36.5
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 4.2e-13 78.6 82 47.6
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.6e-12 76.6 116 40.5
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 4.6e-12 75.1 105 46.7
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 1.0e-11 73.9 115 37.4
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 1.3e-11 73.6 73 53.4
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 1.3e-11 73.6 118 39.0
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.3e-11 72.8 121 38.8
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.7e-11 71.2 125 37.6
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 6.7e-11 71.2 71 49.3
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 8.7e-11 70.9 119 36.1
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.1e-10 70.5 102 39.2
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-10 70.5 108 38.9
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.1e-10 70.5 118 36.4
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 1.1e-10 70.5 133 33.8
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.1e-10 70.5 81 46.9
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.5e-10 70.1 108 38.9
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.5e-10 70.1 108 38.9
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.5e-10 70.1 118 36.4
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 1.9e-10 69.7 115 34.8
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 1.9e-10 69.7 119 37.8
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 1.9e-10 69.7 134 35.8
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 2.5e-10 69.3 107 38.3
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 2.5e-10 69.3 80 47.5
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 9.6e-10 67.4 108 38.9
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 2.1e-09 66.2 81 46.9
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 2.8e-09 65.9 108 38.0
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 2.8e-09 65.9 107 36.4
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 2.8e-09 65.9 69 46.4
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 3.7e-09 65.5 94 42.6
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 3.7e-09 65.5 118 35.6
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.4e-08 63.5 120 35.0
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 1.8e-08 63.2 71 39.4
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 3.1e-08 62.4 62 48.4
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 3.1e-08 62.4 64 40.6
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 3.1e-08 62.4 125 32.0
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 4.0e-08 62.0 61 54.1
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 4.0e-08 62.0 87 39.1
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 4.0e-08 62.0 72 45.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 4.0e-08 62.0 96 39.6
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 6.9e-08 61.2 84 39.3
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.5e-07 60.1 126 32.5
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 2.0e-07 59.7 111 36.9
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 2.0e-07 59.7 121 33.1
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 2.0e-07 59.7 127 36.2
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.6e-07 59.3 63 46.0
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 2.6e-07 59.3 63 46.0
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 3.4e-07 58.9 124 35.5
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 4.5e-07 58.5 65 46.2
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 5.8e-07 58.2 45 55.6
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 7.6e-07 57.8 109 32.1
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 7.6e-07 57.8 63 44.4
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 7.6e-07 57.8 63 44.4
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 7.6e-07 57.8 60 45.0
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 1.0e-06 57.4 66 48.5
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 1.0e-06 57.4 91 36.3
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 1.0e-06 57.4 55 47.3
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 1.0e-06 57.4 88 42.0
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.0e-06 57.4 114 36.0
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 1.0e-06 57.4 138 31.2
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.3e-06 57.0 109 32.1
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.3e-06 57.0 53 50.9
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.7e-06 56.6 53 50.9
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 1.7e-06 56.6 60 45.0
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 2.2e-06 56.2 66 45.5
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 2.2e-06 56.2 116 34.5
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 2.9e-06 55.8 63 42.9
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 2.9e-06 55.8 67 44.8
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 3.8e-06 55.5 38 57.9
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 6.5e-06 54.7 130 30.0


User provided reference genes

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