Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4877 Erigeron canadensis HOM05D003844 ORTHO05D004534 6.1e-126 454.1 225 100.0
Lsat_1_v5_gn_4_121720 Lactuca sativa HOM05D003844 ORTHO05D004534 3.5e-73 278.9 243 59.7
HanXRQChr09g0268531 Helianthus annuus HOM05D003844 ORTHO05D004534 7.3e-71 271.2 226 61.9
Lsat_1_v5_gn_1_18240 Lactuca sativa HOM05D003844 ORTHO05D004534 4.6e-65 251.9 184 66.3
HanXRQChr02g0040241 Helianthus annuus HOM05D003844 ORTHO05D004534 2.1e-62 243.0 172 66.3
Oeu009862.2 Olea europaea HOM05D003844 ORTHO05D004534 2.6e-60 236.1 205 55.6
ClCG08G015280 Citrullus lanatus HOM05D003844 ORTHO05D004534 3.4e-60 235.7 210 57.1
Dinv36050 Davidia involucrata HOM05D003844 ORTHO05D004534 3.4e-60 235.7 182 59.9
Nitab4.5_0000110g0330 Nicotiana tabacum HOM05D003844 ORTHO05D004534 9.9e-60 234.2 183 59.0
CSS0015572 Camellia sinensis var. sinensis HOM05D003844 ORTHO05D004534 1.3e-59 233.8 223 53.4
ECA247G1868 Erigeron canadensis HOM05D003844 ORTHO05D004534 1.3e-59 233.8 186 63.4
Nitab4.5_0003246g0140 Nicotiana tabacum HOM05D003844 ORTHO05D004534 6.4e-59 231.5 178 59.6
MELO3C010927.2 Cucumis melo HOM05D003844 ORTHO05D004534 8.4e-59 231.1 210 56.2
Hma1.2p1_0203F.1_g086610 Hydrangea macrophylla HOM05D003844 ORTHO05D004534 8.4e-59 231.1 182 62.1
Migut.C00695 Erythranthe guttata HOM05D003844 ORTHO05D004534 1.1e-58 230.7 187 61.0
MSTRG.22297 Avicennia marina HOM05D003844 ORTHO05D004534 1.4e-58 230.3 189 57.7
Sed0006776 Sechium edule HOM05D003844 ORTHO05D004534 1.4e-58 230.3 180 61.7
CSS0020057 Camellia sinensis var. sinensis HOM05D003844 ORTHO05D004534 5.4e-58 228.4 190 58.4
CsaV3_2G028530 Cucumis sativus L. HOM05D003844 ORTHO05D004534 7.1e-58 228.0 210 55.7
Lj4A783T77 Lonicera japonica HOM05D003844 ORTHO05D004534 9.3e-58 227.6 199 56.3
Cc10_g03240 Coffea canephora HOM05D003844 ORTHO05D004534 6.0e-57 224.9 191 58.1
Sabra14G0030700 Salix brachista HOM05D003844 ORTHO05D004534 7.9e-57 224.6 207 53.6
Manes.18G029300 Manihot esculenta HOM05D003844 ORTHO05D004534 1.3e-56 223.8 207 54.6
Nn5g29521 Nelumbo nucifera HOM05D003844 ORTHO05D004534 1.3e-56 223.8 189 59.3
Potri.014G042200 Populus trichocarpa HOM05D003844 ORTHO05D004534 1.7e-56 223.4 207 53.1
Cfa018432 Carpinus fangiana HOM05D003844 ORTHO05D004534 3.0e-56 222.6 207 54.6
Sopen04g033610 Solanum pennellii HOM05D003844 ORTHO05D004534 3.9e-56 222.2 183 56.3
PGSC0003DMG400027853 Solanum tuberosum HOM05D003844 ORTHO05D004534 3.9e-56 222.2 183 57.4
COL.COLO4_26357 Corchorus olitorius HOM05D003844 ORTHO05D004534 6.6e-56 221.5 212 55.7
SGA_v2.0_scaffold48G18062 Striga asiatica HOM05D003844 ORTHO05D004534 6.6e-56 221.5 201 54.7
Solyc04g080020.4 Solanum lycopersicum HOM05D003844 ORTHO05D004534 8.7e-56 221.1 183 56.3
Sc02g0006420 Simmondsia chinensis HOM05D003844 ORTHO05D004534 1.1e-55 220.7 184 59.2
Haze_17631 Corylus avellana HOM05D003844 ORTHO05D004534 1.5e-55 220.3 207 54.1
MBI16_g28231_MAGBIO Magnolia biondii HOM05D003844 ORTHO05D004534 1.9e-55 219.9 217 55.3
PGR031G2782 Punica granatum HOM05D003844 ORTHO05D004534 1.9e-55 219.9 184 57.1
QL01p055640 Quercus lobata HOM05D003844 ORTHO05D004534 1.9e-55 219.9 214 54.7
CANSAT25G0011 Cannabis sativa HOM05D003844 ORTHO05D004534 2.5e-55 219.5 183 58.5
Duzib041G0703 Durio zibethinus HOM05D003844 ORTHO05D004534 2.5e-55 219.5 224 51.8
Potri.002G134100 Populus trichocarpa HOM05D003844 ORTHO05D004534 3.3e-55 219.2 215 52.1
QL02p007730 Quercus lobata HOM05D003844 ORTHO05D004534 5.6e-55 218.4 214 54.7
Atru.chr13.530 Acer truncatum HOM05D003844 ORTHO05D004534 1.6e-54 216.9 196 55.1
ATR0733G255 Amborella trichopoda HOM05D003844 ORTHO05D004534 1.6e-54 216.9 181 59.1
MD08G1032300 Malus domestica HOM05D003844 ORTHO05D004534 1.6e-54 216.9 219 54.3
GSVIVG01009661001 Vitis vinifera HOM05D003844 ORTHO05D004534 2.1e-54 216.5 209 53.6
CAN.G1126.25 Capsicum annuum HOM05D003844 ORTHO05D004534 2.8e-54 216.1 187 56.7
Migut.N00512 Erythranthe guttata HOM05D003844 ORTHO05D004534 3.6e-54 215.7 184 57.6
Lj4C43T11 Lonicera japonica HOM05D003844 ORTHO05D004534 3.6e-54 215.7 183 56.3
MSTRG.1291 Avicennia marina HOM05D003844 ORTHO05D004534 4.8e-54 215.3 212 50.0
Ciclev10001396m.g Citrus clementina HOM05D003844 ORTHO05D004534 4.8e-54 215.3 188 57.4
TWI56G1194 Tripterygium wilfordii HOM05D003844 ORTHO05D004534 6.2e-54 214.9 209 52.2
TAR628G0330 Trochodendron aralioides HOM05D003844 ORTHO05D004534 6.2e-54 214.9 200 54.5
Peaxi162Scf00057g00625 Petunia axillaris HOM05D003844 ORTHO05D004534 8.1e-54 214.5 184 56.5
RcHm_v2.0_Chr6g0300601 Rosa chinensis HOM05D003844 ORTHO05D004534 8.1e-54 214.5 182 58.8
Eucgr.A00496 Eucalyptus grandis HOM05D003844 ORTHO05D004534 1.1e-53 214.2 182 56.6
THA.LOC104813592 Tarenaya hassleriana HOM05D003844 ORTHO05D004534 1.1e-53 214.2 186 57.5
TAR376G1074 Trochodendron aralioides HOM05D003844 ORTHO05D004534 1.4e-53 213.8 182 57.1
Prupe.1G382400 Prunus persica HOM05D003844 ORTHO05D004534 1.8e-53 213.4 207 55.1
Duzib093G0973 Durio zibethinus HOM05D003844 ORTHO05D004534 5.3e-53 211.8 221 49.8
TPR.G15768 Trifolium pratense HOM05D003844 ORTHO05D004534 6.9e-53 211.5 179 59.2
Thecc.08G023100 Theobroma cacao HOM05D003844 ORTHO05D004534 2.6e-52 209.5 221 49.8
Aqoxy6G01030 Aquilegia oxysepala HOM05D003844 ORTHO05D004534 3.4e-52 209.1 199 55.8
BcaB02g08710 Brassica carinata HOM05D003844 ORTHO05D004534 4.5e-52 208.8 185 56.2
THA.LOC104808171 Tarenaya hassleriana HOM05D003844 ORTHO05D004534 5.8e-52 208.4 220 49.5
CDE07G1101 Ceratophyllum demersum HOM05D003844 ORTHO05D004534 7.6e-52 208.0 178 55.6
MD15G1029000 Malus domestica HOM05D003844 ORTHO05D004534 7.6e-52 208.0 219 53.0
PSO700G0367 Papaver somniferum HOM05D003844 ORTHO05D004534 9.9e-52 207.6 191 55.5
PSO170G0196 Papaver somniferum HOM05D003844 ORTHO05D004534 1.3e-51 207.2 191 55.5
TWI36G0861 Tripterygium wilfordii HOM05D003844 ORTHO05D004534 1.3e-51 207.2 185 55.1
SalBow7G3794 Salvia bowleyana HOM05D003844 ORTHO05D004534 2.2e-51 206.5 179 57.0
MSTRG.25150 Avicennia marina HOM05D003844 ORTHO05D004534 2.9e-51 206.1 203 50.2
Lj5g0022337 Lotus japonicus HOM05D003844 ORTHO05D004534 2.9e-51 206.1 178 56.7
VMungo1309G3156 Vigna mungo HOM05D003844 ORTHO05D004534 2.9e-51 206.1 184 57.1
Medtr7g104580 Medicago truncatula HOM05D003844 ORTHO05D004534 3.8e-51 205.7 180 56.1
Psat3g033360 Pisum sativum HOM05D003844 ORTHO05D004534 3.8e-51 205.7 179 57.0
HPP92_000098 Vanilla planifolia HOM05D003844 ORTHO05D004534 3.8e-51 205.7 180 55.6
BraA07t31982Z Brassica rapa HOM05D003844 ORTHO05D004534 4.9e-51 205.3 182 58.2
AL2G40430 Arabidopsis lyrata HOM05D003844 ORTHO05D004534 8.4e-51 204.5 193 56.5
Hund26589 Selenicereus undatus HOM05D003844 ORTHO05D004534 8.4e-51 204.5 190 53.7
CiPaw.15G074100 Carya illinoinensis HOM05D003844 ORTHO05D004534 1.1e-50 204.1 215 50.7
FvH4_2g40130 Fragaria vesca HOM05D003844 ORTHO05D004534 1.1e-50 204.1 213 52.1
Gohir.A06G011600 Gossypium hirsutum HOM05D003844 ORTHO05D004534 1.1e-50 204.1 212 50.9
Manes.05G162700 Manihot esculenta HOM05D003844 ORTHO05D004534 1.1e-50 204.1 206 49.0
Ah.11g043250 Amaranthus hybridus HOM05D003844 ORTHO05D004534 1.4e-50 203.8 230 50.0
Gorai.010G011800 Gossypium raimondii HOM05D003844 ORTHO05D004534 1.4e-50 203.8 206 50.5
Lj1g0003038 Lotus japonicus HOM05D003844 ORTHO05D004534 1.4e-50 203.8 190 52.6
BcaC08g47532 Brassica carinata HOM05D003844 ORTHO05D004534 1.9e-50 203.4 212 50.9
A07p44740 Brassica napus HOM05D003844 ORTHO05D004534 1.9e-50 203.4 200 54.0
BolC6t40372H Brassica oleracea HOM05D003844 ORTHO05D004534 1.9e-50 203.4 212 50.9
DCAR_020963 Daucus carota HOM05D003844 ORTHO05D004534 1.9e-50 203.4 209 49.3
Medtr1g022005 Medicago truncatula HOM05D003844 ORTHO05D004534 1.9e-50 203.4 180 55.6
Thhalv10018678m.g Eutrema salsugineum HOM05D003844 ORTHO05D004534 2.4e-50 203.0 192 57.3
FAN27G2061 Fragaria x ananassa HOM05D003844 ORTHO05D004534 2.4e-50 203.0 221 51.1
vmacro21621 Vaccinium macrocarpon HOM05D003844 ORTHO05D004534 4.2e-50 202.2 178 54.5
SEGI_22020 Sequoiadendron giganteum HOM05D003844 ORTHO05D004534 5.5e-50 201.8 184 56.0
Glyma.04G033600 Glycine max HOM05D003844 ORTHO05D004534 7.1e-50 201.4 182 56.6
TPR.G19519 Trifolium pratense HOM05D003844 ORTHO05D004534 7.1e-50 201.4 179 55.3
CiPaw.16G054500 Carya illinoinensis HOM05D003844 ORTHO05D004534 9.3e-50 201.1 230 47.8
SGA_v2.0_scaffold374G50217 Striga asiatica HOM05D003844 ORTHO05D004534 9.3e-50 201.1 216 48.1
arahy.Tifrunner.gnm1.ann1.N96YDH Arachis hypogaea HOM05D003844 ORTHO05D004534 1.2e-49 200.7 186 55.9
C06p53560 Brassica napus HOM05D003844 ORTHO05D004534 1.6e-49 200.3 214 50.0
Gohir.D06G009000 Gossypium hirsutum HOM05D003844 ORTHO05D004534 1.6e-49 200.3 221 48.9
Phvul.001G015600 Phaseolus vulgaris HOM05D003844 ORTHO05D004534 1.6e-49 200.3 202 52.0
AUR62033852 Chenopodium quinoa HOM05D003844 ORTHO05D004534 2.1e-49 199.9 232 47.0
FAN15G3259 Fragaria x ananassa HOM05D003844 ORTHO05D004534 2.7e-49 199.5 220 50.5
AT1G80950 Arabidopsis thaliana HOM05D003844 ORTHO05D004534 3.5e-49 199.1 222 50.0
Glyma.06G033800 Glycine max HOM05D003844 ORTHO05D004534 4.6e-49 198.7 182 56.0
Gohir.A01G117200 Gossypium hirsutum HOM05D003844 ORTHO05D004534 4.6e-49 198.7 184 56.0
Lalb_Chr22g0355431 Lupinus albus HOM05D003844 ORTHO05D004534 4.6e-49 198.7 183 53.6
AUR62041676 Chenopodium quinoa HOM05D003844 ORTHO05D004534 6.0e-49 198.4 234 47.9
Sp5g34790 Schrenkiella parvula HOM05D003844 ORTHO05D004534 6.0e-49 198.4 194 55.2
Phvul.009G056600 Phaseolus vulgaris HOM05D003844 ORTHO05D004534 7.9e-49 198.0 198 53.0
Aa31LG4G1260 Aethionema arabicum HOM05D003844 ORTHO05D004534 1.0e-48 197.6 221 49.3
A07p26970 Brassica napus HOM05D003844 ORTHO05D004534 1.0e-48 197.6 197 53.8
BraA07t30341Z Brassica rapa HOM05D003844 ORTHO05D004534 1.0e-48 197.6 197 53.8
Lalb_Chr11g0062381 Lupinus albus HOM05D003844 ORTHO05D004534 1.0e-48 197.6 217 50.2
BcaNung04167 Brassica carinata HOM05D003844 ORTHO05D004534 1.3e-48 197.2 196 53.6
C06p29640 Brassica napus HOM05D003844 ORTHO05D004534 1.3e-48 197.2 196 53.6
Gorai.002G129600 Gossypium raimondii HOM05D003844 ORTHO05D004534 1.3e-48 197.2 184 55.4
BolC6t38129H Brassica oleracea HOM05D003844 ORTHO05D004534 1.8e-48 196.8 197 53.8
FAN20G0087 Fragaria x ananassa HOM05D003844 ORTHO05D004534 1.8e-48 196.8 220 50.5
arahy.Tifrunner.gnm1.ann1.HBE6U5 Arachis hypogaea HOM05D003844 ORTHO05D004534 3.9e-48 195.7 230 48.7
EL10Ac1g01762 Beta vulgaris HOM05D003844 ORTHO05D004534 6.7e-48 194.9 189 49.7
Carub.0002s2659 Capsella rubella HOM05D003844 ORTHO05D004534 6.7e-48 194.9 195 54.9
PSO675G8298 Papaver somniferum HOM05D003844 ORTHO05D004534 8.7e-48 194.5 188 53.7
CARHR073500 Cardamine hirsuta HOM05D003844 ORTHO05D004534 1.1e-47 194.1 192 53.6
BcaB02g07236 Brassica carinata HOM05D003844 ORTHO05D004534 5.6e-47 191.8 197 52.3
DCAR_019512 Daucus carota HOM05D003844 ORTHO05D004534 5.6e-47 191.8 184 49.5
SalBow8G1589 Salvia bowleyana HOM05D003844 ORTHO05D004534 1.6e-46 190.3 236 43.2
Lalb_Chr23g0266661 Lupinus albus HOM05D003844 ORTHO05D004534 2.1e-46 189.9 202 51.5
Eucgr.F01545 Eucalyptus grandis HOM05D003844 ORTHO05D004534 2.8e-46 189.5 187 50.3
Gohir.A05G260100 Gossypium hirsutum HOM05D003844 ORTHO05D004534 3.7e-46 189.1 206 48.5
Gorai.009G273900 Gossypium raimondii HOM05D003844 ORTHO05D004534 4.0e-45 185.7 199 48.2
Gohir.D05G262000 Gossypium hirsutum HOM05D003844 ORTHO05D004534 5.3e-45 185.3 199 47.7
PGR083G2363 Punica granatum HOM05D003844 ORTHO05D004534 9.0e-45 184.5 193 46.6
Zm00001eb130340 Zea mays HOM05D003844 ORTHO05D004534 2.6e-44 183.0 178 55.1
PSO541G2169 Papaver somniferum HOM05D003844 ORTHO05D004534 3.8e-43 179.1 175 52.6
Rhsim06G0035800 Rhododendron simsii HOM05D003844 ORTHO05D004534 3.8e-43 179.1 235 43.0
Mapoly0057s0031 Marchantia polymorpha HOM05D003844 ORTHO05D004534 4.2e-42 175.6 190 47.4
Pp3c11_25100 Physcomitrium patens HOM05D003844 ORTHO05D004534 1.2e-41 174.1 191 47.6
Pp3c11_25102 Physcomitrium patens HOM05D003844 ORTHO05D004534 1.2e-41 174.1 191 47.6
Psat6g007040 Pisum sativum HOM05D003844 ORTHO05D004534 2.1e-41 173.3 179 49.7
SMO116G0301 Selaginella moellendorffii HOM05D003844 ORTHO05D004534 2.7e-41 172.9 186 48.9
Os05g0357800 Oryza sativa ssp. japonica HOM05D003844 ORTHO05D004534 6.0e-41 171.8 185 49.7
Actinidia15305 Actinidia chinensis HOM05D003844 ORTHO05D004534 7.9e-41 171.4 127 62.2
MD15G1028600 Malus domestica HOM05D003844 ORTHO05D004534 3.0e-40 169.5 162 56.8
Gohir.D01G105300 Gossypium hirsutum HOM05D003844 ORTHO05D004534 6.3e-38 161.8 185 47.6
AagrBONN_evm.TU.Sc2ySwM_368.2423 Anthoceros agrestis HOM05D003844 ORTHO05D004534 6.9e-37 158.3 224 39.3
SalBow8G5355 Salvia bowleyana HOM05D003844 ORTHO05D004534 7.2e-34 148.3 126 53.2
PGR083G2093 Punica granatum HOM05D003844 ORTHO05D004534 2.7e-33 146.4 205 42.0
HanXRQChr17g0553611 Helianthus annuus HOM05D003844 ORTHO05D004534 2.5e-31 139.8 114 59.6
Ca_13342_v3 Cicer arietinum L. HOM05D003844 ORTHO05D004534 5.7e-31 138.7 131 50.4
VMungo0647G2028 Vigna mungo HOM05D003844 ORTHO05D004534 3.1e-29 132.9 132 50.0
Dinv39393 Davidia involucrata HOM05D003844 ORTHO05D004534 4.1e-29 132.5 197 39.6
CBR_g16994 Chara braunii HOM05D003844 ORTHO05D004534 3.6e-25 119.4 241 33.6
unitig_37.g12962 Utricularia gibba HOM05D003844 ORTHO05D004534 4.3e-23 112.5 97 56.7
MBI16_g24678_MAGBIO Magnolia biondii HOM05D003844 ORTHO05D004534 1.2e-20 104.4 97 53.6
Ca_09005_v3 Cicer arietinum L. HOM05D003844 ORTHO05D004534 2.0e-20 103.6 183 37.2
Zm00001eb347450 Zea mays HOM05D003844 ORTHO05D004534 3.2e-18 96.3 79 60.8
Actinidia22564 Actinidia chinensis HOM05D003844 ORTHO05D004534 1.8e-16 90.5 111 44.1
CDE06G1085 Ceratophyllum demersum HOM05D003844 ORTHO05D004534 3.7e-14 82.8 80 56.2
Cre17.g707300 Chlamydomonas reinhardtii HOM05D003844 ORTHO05D004534 3.7e-14 82.8 173 34.1
MBI16_g24677_MAGBIO Magnolia biondii HOM05D003844 ORTHO05D004534 1.0e-08 64.7 52 57.7
unitig_37.g12961 Utricularia gibba HOM05D003844 ORTHO05D004534 1.5e-07 60.8 52 48.1
Migut.B01669 Erythranthe guttata HOM05D003518 ORTHO05D005164 4.8e-06 55.8 187 23.5
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 6.3e-06 55.5 92 28.3
CiPaw.01G258000 Carya illinoinensis HOM05D003518 ORTHO05D005164 8.2e-06 55.1 92 29.3
Os06g0712300 Oryza sativa ssp. japonica HOM05D003518 ORTHO05D005164 8.2e-06 55.1 146 28.1


User provided reference genes

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