Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 1.1e-231 806.2 401 100.0
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 7.4e-183 644.0 391 80.8
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 1.1e-181 640.2 391 81.3
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 2.6e-159 565.8 401 70.6
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.3e-158 563.5 391 70.1
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 6.5e-155 551.2 397 67.8
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 8.0e-153 544.3 401 67.6
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 8.0e-153 544.3 393 68.7
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.5e-151 540.0 396 68.4
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 9.8e-151 537.3 413 64.9
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 6.3e-150 534.6 391 67.0
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.8e-149 533.1 398 66.6
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.8e-149 533.1 390 67.7
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 2.4e-149 532.7 399 65.9
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 4.1e-149 531.9 390 66.4
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 5.4e-149 531.6 391 66.2
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 7.0e-149 531.2 392 66.8
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 9.1e-149 530.8 398 66.3
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 1.6e-148 530.0 394 65.0
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 1.6e-148 530.0 396 66.2
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 1.6e-148 530.0 394 65.7
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 4.5e-148 528.5 394 65.5
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 7.7e-148 527.7 398 65.8
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 5.0e-147 525.0 401 64.3
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 6.5e-147 524.6 392 65.6
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 6.5e-147 524.6 394 66.8
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 8.5e-147 524.2 396 64.4
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.2e-145 520.4 391 65.2
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.6e-145 520.0 396 65.2
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 3.6e-145 518.8 391 63.7
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 3.6e-145 518.8 393 65.1
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 4.7e-145 518.5 391 65.0
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 4.7e-145 518.5 391 63.4
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 6.1e-145 518.1 401 64.6
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 2.3e-144 516.2 393 64.1
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.0e-144 515.4 396 64.4
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 4.0e-144 515.4 452 59.3
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 1.2e-143 513.8 393 64.9
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.2e-143 513.8 413 60.8
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 5.7e-143 511.5 423 61.9
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 5.7e-143 511.5 393 64.1
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 2.2e-142 509.6 393 64.6
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.7e-142 508.8 433 60.5
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 4.9e-142 508.4 397 64.5
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 4.9e-142 508.4 391 62.9
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 1.8e-141 506.5 385 62.9
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 3.1e-141 505.8 395 65.1
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 7.0e-141 504.6 392 64.8
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 7.0e-141 504.6 393 63.9
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 9.2e-141 504.2 386 63.0
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 3.5e-140 502.3 395 64.6
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.5e-140 502.3 433 60.0
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 4.5e-140 501.9 394 64.5
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 1.0e-139 500.7 393 63.4
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 1.3e-139 500.4 393 64.6
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 1.3e-139 500.4 393 63.6
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 3.8e-139 498.8 393 64.4
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 3.8e-139 498.8 394 62.4
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 5.0e-139 498.4 404 62.9
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 6.6e-139 498.0 401 63.8
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 1.1e-138 497.3 419 62.1
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 1.5e-138 496.9 393 62.1
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 1.9e-138 496.5 396 62.4
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 5.6e-138 495.0 418 62.0
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 5.6e-138 495.0 401 60.3
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 5.6e-138 495.0 392 61.7
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 9.5e-138 494.2 393 63.1
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 3.6e-137 492.3 393 63.6
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 8.0e-137 491.1 393 63.1
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 1.4e-136 490.3 395 63.0
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 2.3e-136 489.6 403 60.5
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 1.5e-135 486.9 404 61.9
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 7.5e-135 484.6 477 53.7
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.6e-132 476.9 381 63.0
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 1.0e-131 474.2 361 64.8
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 3.0e-131 472.6 392 61.0
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 1.1e-130 470.7 503 52.1
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.5e-130 470.3 356 64.0
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.5e-130 469.5 398 60.6
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 2.6e-127 459.5 396 57.6
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.6e-124 450.3 358 63.4
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 2.7e-124 449.5 331 66.5
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 5.6e-122 441.8 442 54.8
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 4.4e-119 432.2 432 54.9
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 6.4e-118 428.3 391 57.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 1.3e-115 420.6 381 58.3
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 1.1e-114 417.5 353 58.6
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 1.5e-114 417.2 390 55.1
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 1.1e-106 391.0 283 66.8
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 3.3e-106 389.4 313 60.7
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 1.2e-103 380.9 398 51.8
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 3.4e-103 379.4 360 55.3
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.2e-102 376.7 302 64.6
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 1.2e-100 370.9 272 65.1
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 2.9e-94 349.7 403 45.7
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 2.9e-94 349.7 408 46.6
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 1.0e-91 341.3 302 57.6
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 3.8e-86 322.8 396 44.7
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.4e-85 320.9 253 62.8
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 1.5e-79 300.8 235 62.6
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 1.7e-78 297.4 232 62.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 2.3e-75 287.0 220 63.6
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 4.3e-74 282.7 488 36.3
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 3.9e-67 259.6 372 38.7
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 6.7e-67 258.8 193 66.8
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 5.9e-63 245.7 327 42.2
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 2.0e-47 194.1 148 63.5
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 1.6e-39 167.9 135 65.2
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 8.5e-38 162.2 531 26.6
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 2.3e-30 137.5 113 58.4
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 1.2e-28 131.7 103 62.1
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 2.1e-28 131.0 171 42.7
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 8.8e-27 125.6 80 75.0
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.8e-25 120.6 124 50.8
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.3e-25 119.0 124 50.0
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-24 118.6 124 50.0
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-24 118.6 124 50.0
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-24 118.6 124 50.0
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.1e-24 117.1 124 49.2
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 4.1e-24 116.7 97 56.7
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 9.2e-24 115.5 79 68.4
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.5e-23 113.2 97 54.6
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.8e-23 112.5 97 55.7
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 7.3e-21 105.9 69 69.6
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 9.5e-21 105.5 111 45.9
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 2.1e-20 104.4 113 48.7
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.8e-19 101.3 80 60.0
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-19 100.9 141 43.3
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.6e-18 97.4 69 65.2
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 9.8e-18 95.5 60 73.3
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 1.8e-16 91.3 126 42.9
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 3.2e-16 90.5 71 59.2
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.7e-15 87.4 67 61.2
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.7e-15 87.4 67 61.2
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 7.8e-15 85.9 67 59.7
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.9e-14 83.6 67 58.2
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 5.0e-14 83.2 53 71.7
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 6.6e-14 82.8 71 59.2
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 9.5e-13 79.0 67 58.2
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 9.8e-10 68.9 97 39.2
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 1.3e-06 58.5 65 43.1
ClCG05G010860 Citrullus lanatus HOM05D002536 ORTHO05D006290 2.3e-06 57.8 43 65.1


User provided reference genes

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