Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 2.7e-67 258.8 163 100.0
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 4.4e-33 145.2 127 77.2
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 9.8e-33 144.1 125 75.2
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.7e-32 143.3 80 90.0
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.8e-31 139.8 81 86.4
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 9.1e-31 137.5 81 84.0
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 9.1e-31 137.5 128 64.8
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-28 129.8 72 88.9
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.2e-27 127.1 131 64.9
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.2e-27 127.1 131 64.1
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 3.6e-27 125.6 127 56.7
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.4e-26 123.6 131 61.8
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.8e-26 123.2 81 76.5
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 8.9e-26 120.9 132 53.0
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-25 120.6 81 72.8
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 1.2e-25 120.6 81 70.4
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.2e-25 120.6 81 70.4
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.6e-25 119.4 81 74.1
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 3.4e-25 119.0 81 75.3
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 4.4e-25 118.6 79 75.9
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 4.4e-25 118.6 86 70.9
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 5.7e-25 118.2 81 74.1
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 1.3e-24 117.1 124 53.2
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.8e-24 115.9 129 52.7
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 3.7e-24 115.5 80 75.0
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-24 115.5 81 67.9
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 6.3e-24 114.8 80 77.5
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 8.3e-24 114.4 80 76.2
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.8e-23 113.2 132 50.8
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.8e-23 113.2 81 72.8
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.1e-23 112.1 68 83.8
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.1e-23 112.1 81 71.6
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 5.4e-23 111.7 129 55.8
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.0e-23 111.3 132 50.0
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.2e-23 110.9 132 51.5
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 1.2e-22 110.5 79 75.9
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 1.2e-22 110.5 79 75.9
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 2.0e-22 109.8 128 52.3
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 2.7e-22 109.4 79 74.7
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 2.7e-22 109.4 82 72.0
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 5.9e-22 108.2 82 70.7
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.0e-21 107.5 82 70.7
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.7e-21 106.7 81 67.9
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 2.3e-21 106.3 67 80.6
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.9e-21 105.5 83 71.1
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 6.6e-21 104.8 84 63.1
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 6.6e-21 104.8 67 79.1
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-20 103.6 81 66.7
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-20 103.6 81 66.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-20 103.6 81 66.7
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.5e-20 103.6 81 66.7
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.5e-20 103.6 85 67.1
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.5e-20 102.8 127 49.6
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 3.3e-20 102.4 87 63.2
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 3.3e-20 102.4 86 69.8
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 5.6e-20 101.7 128 53.1
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 7.3e-20 101.3 81 64.2
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 7.3e-20 101.3 81 64.2
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 9.5e-20 100.9 81 66.7
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.2e-19 100.5 84 60.7
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 2.1e-19 99.8 127 50.4
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 3.6e-19 99.0 83 65.1
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 3.6e-19 99.0 80 65.0
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 3.6e-19 99.0 80 66.2
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 3.6e-19 99.0 81 65.4
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 4.7e-19 98.6 127 48.0
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 4.7e-19 98.6 79 67.1
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 4.7e-19 98.6 82 69.5
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.0e-18 97.4 80 63.8
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.0e-18 97.4 86 67.4
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.0e-18 97.4 81 66.7
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.8e-18 96.7 84 63.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 3.1e-18 95.9 83 59.0
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 6.8e-18 94.7 69 75.4
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.9e-18 94.4 69 73.9
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.9e-18 94.4 69 73.9
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 8.9e-18 94.4 81 67.9
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 1.5e-17 93.6 81 66.7
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.0e-17 93.2 142 43.7
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 2.6e-17 92.8 81 65.4
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 2.6e-17 92.8 81 65.4
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.6e-17 92.8 80 63.8
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 3.4e-17 92.4 81 60.5
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.4e-17 92.4 83 60.2
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.4e-17 92.4 83 60.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.4e-17 92.4 83 60.2
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.4e-17 92.4 79 63.3
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.4e-17 92.0 88 56.8
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.8e-17 91.7 82 58.5
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.8e-17 91.7 82 58.5
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 5.8e-17 91.7 87 65.5
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 7.5e-17 91.3 81 66.7
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.3e-16 90.5 83 68.7
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.3e-16 90.5 59 71.2
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.9e-16 89.4 73 67.1
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 2.9e-16 89.4 73 67.1
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.9e-16 89.4 80 58.8
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 4.9e-16 88.6 77 63.6
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 6.4e-16 88.2 67 68.7
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 6.4e-16 88.2 81 63.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 6.4e-16 88.2 81 63.0
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 6.4e-16 88.2 81 61.7
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 6.4e-16 88.2 77 63.6
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 6.4e-16 88.2 67 68.7
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 6.4e-16 88.2 81 61.7
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 6.4e-16 88.2 67 68.7
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 6.4e-16 88.2 77 63.6
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 6.4e-16 88.2 59 69.5
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 8.3e-16 87.8 84 57.1
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.1e-15 87.4 84 56.0
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.1e-15 87.4 81 63.0
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.9e-15 86.7 69 66.7
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.4e-15 86.3 68 69.1
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.4e-15 86.3 68 67.6
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.4e-15 86.3 68 67.6
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.4e-15 86.3 80 58.8
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.4e-15 86.3 85 60.0
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-15 85.9 67 67.2
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.1e-15 85.5 83 57.8
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.1e-15 85.5 83 57.8
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.1e-15 85.5 83 56.6
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 5.4e-15 85.1 78 61.5
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 5.4e-15 85.1 72 56.9
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 7.0e-15 84.7 84 56.0
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 2.0e-14 83.2 75 64.0
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.0e-14 83.2 89 55.1
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 2.7e-14 82.8 82 57.3
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 6.0e-14 81.6 77 61.0
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.0e-14 81.6 81 56.8
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 7.8e-14 81.3 86 57.0
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.3e-13 80.5 82 54.9
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 3.0e-13 79.3 86 54.7
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 6.6e-13 78.2 55 72.7
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 6.6e-13 78.2 81 50.6
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 8.6e-13 77.8 81 56.8
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.5e-12 77.0 57 70.2
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.5e-12 77.0 83 56.6
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.9e-12 76.6 83 50.6
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.5e-12 76.3 81 55.6
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 2.5e-12 76.3 81 55.6
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.5e-12 76.3 81 55.6
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 4.3e-12 75.5 64 65.6
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.3e-12 74.7 81 55.6
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.1e-11 73.2 81 53.1
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 4.7e-11 72.0 81 55.6
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 8.0e-11 71.2 81 55.6
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.1e-10 70.9 85 54.1
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 4.0e-10 68.9 130 38.5
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 1.5e-09 67.0 82 54.9
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.0e-09 66.6 69 60.9
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.4e-09 65.9 76 56.6
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.4e-09 65.9 76 56.6
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 3.4e-09 65.9 97 44.3
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 3.4e-09 65.9 70 58.6
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 7.5e-09 64.7 65 60.0
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 7.5e-09 64.7 65 60.0
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 9.8e-09 64.3 81 51.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.9e-08 62.8 67 56.7
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 4.9e-08 62.0 65 56.9
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.1e-07 60.8 67 56.7
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.1e-07 60.8 79 49.4
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 1.4e-07 60.5 81 46.9
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.9e-07 60.1 48 66.7
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 2.4e-07 59.7 66 60.6
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 3.2e-07 59.3 66 60.6
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 3.2e-07 59.3 66 60.6
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 3.2e-07 59.3 66 60.6
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 5.4e-07 58.5 88 46.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 9.2e-07 57.8 60 56.7
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.6e-06 57.0 81 44.4
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.1e-06 56.6 64 54.7
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.1e-06 56.6 64 54.7
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.7e-06 56.2 91 45.1
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 6.0e-06 55.1 50 60.0
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.8e-06 54.7 82 51.2
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.8e-06 54.7 82 51.2


User provided reference genes

Program Settings