Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 7.3e-86 320.9 205 100.0
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 2.8e-69 265.8 205 72.7
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 5.3e-68 261.5 206 73.3
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 6.9e-68 261.2 206 74.8
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 4.5e-67 258.5 206 72.3
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 4.5e-67 258.5 206 72.3
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 5.0e-50 201.8 212 57.5
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.2e-49 198.7 200 60.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.7e-48 196.1 200 60.0
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.0e-47 194.1 205 59.5
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 2.3e-47 193.0 210 59.5
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.1e-46 190.7 206 58.7
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.1e-46 190.7 206 58.7
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 2.6e-46 189.5 213 56.8
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 5.7e-46 188.3 195 59.5
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.7e-45 186.8 208 56.2
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 3.7e-45 185.7 211 53.1
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.7e-45 185.7 195 58.5
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 6.3e-45 184.9 200 55.0
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 6.3e-45 184.9 195 61.5
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 2.4e-44 183.0 209 56.0
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 3.1e-44 182.6 191 58.6
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.1e-44 182.2 191 58.1
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 5.3e-44 181.8 209 57.9
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 9.1e-44 181.0 219 54.8
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.2e-43 180.6 205 62.0
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.2e-43 180.6 205 62.0
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.2e-43 180.6 208 67.3
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.2e-43 180.6 210 55.2
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 3.4e-43 179.1 205 53.2
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 3.4e-43 179.1 187 56.7
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 5.9e-43 178.3 206 53.4
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 7.7e-43 177.9 203 55.7
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 1.0e-42 177.6 208 66.8
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 1.3e-42 177.2 217 54.8
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.7e-42 176.8 207 55.1
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 1.7e-42 176.8 207 57.0
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.9e-42 176.0 187 58.8
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 2.9e-42 176.0 187 61.5
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 3.8e-42 175.6 187 55.1
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 3.8e-42 175.6 187 55.1
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 3.8e-42 175.6 207 51.7
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 3.8e-42 175.6 190 54.2
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 5.0e-42 175.3 204 66.2
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 5.0e-42 175.3 211 55.9
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 5.0e-42 175.3 194 52.6
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 6.5e-42 174.9 189 56.6
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 8.5e-42 174.5 189 56.6
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.4e-41 173.7 203 56.2
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 3.2e-41 172.6 219 53.0
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 4.2e-41 172.2 190 58.4
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 4.2e-41 172.2 190 54.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 4.2e-41 172.2 205 64.9
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 5.5e-41 171.8 187 65.8
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 5.5e-41 171.8 189 54.5
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 7.2e-41 171.4 190 56.3
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.2e-41 171.4 218 53.2
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 7.2e-41 171.4 194 57.2
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 1.6e-40 170.2 203 55.2
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.1e-40 169.9 187 55.6
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 2.7e-40 169.5 203 53.2
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 4.7e-40 168.7 187 68.4
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 6.1e-40 168.3 189 55.0
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 7.9e-40 167.9 212 63.7
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.9e-40 167.9 216 52.8
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.9e-40 167.9 217 52.1
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 1.4e-39 167.2 195 53.8
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 1.4e-39 167.2 196 65.8
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.8e-39 166.8 203 58.6
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.8e-39 166.8 194 51.5
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 2.3e-39 166.4 191 55.5
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 2.3e-39 166.4 195 53.3
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.9e-39 165.6 193 57.0
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 5.2e-39 165.2 203 53.7
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 8.8e-39 164.5 187 55.1
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 8.8e-39 164.5 188 53.7
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 1.5e-38 163.7 200 52.5
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 2.0e-38 163.3 212 49.1
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 2.6e-38 162.9 192 53.6
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 3.3e-38 162.5 203 59.1
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 4.4e-38 162.2 189 54.5
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 4.4e-38 162.2 215 59.1
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 5.7e-38 161.8 192 52.6
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.7e-37 160.2 216 54.2
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 3.7e-37 159.1 213 54.9
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 3.7e-37 159.1 195 50.8
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 6.3e-37 158.3 197 52.3
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 8.2e-37 157.9 192 54.7
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.1e-36 157.5 205 52.7
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 3.1e-36 156.0 195 62.1
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 4.1e-36 155.6 206 48.5
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 5.3e-36 155.2 221 48.9
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 7.0e-36 154.8 246 54.9
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 7.0e-36 154.8 246 54.9
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 7.0e-36 154.8 216 53.2
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 9.1e-36 154.5 193 49.7
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 1.2e-35 154.1 195 61.5
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 2.0e-35 153.3 208 49.0
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 1.3e-34 150.6 181 54.1
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 2.2e-34 149.8 210 58.1
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.9e-33 146.7 206 48.1
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 7.2e-33 144.8 251 43.4
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 2.1e-32 143.3 181 53.0
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 2.1e-32 143.3 181 53.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 6.7e-31 138.3 193 47.2
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 8.8e-31 137.9 191 59.7
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 3.3e-30 136.0 193 45.6
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.3e-29 134.0 191 46.6
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 7.0e-28 128.3 185 47.0
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.2e-27 127.5 158 54.4
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.9e-26 122.9 122 62.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 6.5e-26 121.7 191 52.9
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 9.4e-25 117.9 168 45.2
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 5.2e-23 112.1 94 66.0
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 5.2e-23 112.1 191 39.8
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 2.0e-22 110.2 156 50.0
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.4e-22 109.0 164 49.4
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 1.8e-20 103.6 197 40.6
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.1e-20 102.8 125 53.6
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 9.1e-20 101.3 190 40.5
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 4.5e-19 99.0 149 48.3
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.0e-18 97.8 183 37.2
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 8.6e-18 94.7 183 41.5
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 1.5e-17 94.0 131 62.6
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 1.9e-17 93.6 179 32.4
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.2e-17 92.4 193 42.0
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 1.2e-16 90.9 189 33.9
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 1.8e-15 87.0 203 32.5
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.6e-14 83.2 67 65.7
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 2.4e-12 76.6 169 51.5
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.8e-10 69.3 121 39.7
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 2.5e-09 66.6 116 56.0
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 2.0e-06 57.0 171 30.4
CDE10G0174 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 5.7e-06 55.5 65 53.8


User provided reference genes

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