Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 4.1e-93 344.7 179 100.0
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 3.8e-78 295.0 196 81.1
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.6e-76 288.1 196 79.6
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.6e-76 288.1 196 79.6
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.3e-75 286.6 196 78.6
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.1e-75 284.6 196 78.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.1e-75 284.6 196 78.1
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 5.6e-74 281.2 196 77.6
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.0e-71 272.7 196 75.5
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 4.5e-71 271.6 196 75.0
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 8.4e-70 267.3 196 74.5
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 2.3e-67 259.2 192 73.4
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 3.7e-65 251.9 196 72.4
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.4e-64 250.0 194 73.7
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.8e-64 249.6 191 74.3
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 3.1e-64 248.8 192 73.4
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 4.5e-63 245.0 154 85.1
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.5e-63 245.0 197 68.0
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 7.6e-63 244.2 196 69.4
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.3e-62 243.4 196 68.9
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-62 243.4 196 68.4
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.3e-62 243.4 196 72.4
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.7e-62 243.0 196 72.4
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.7e-62 243.0 189 73.0
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 2.9e-62 242.3 195 68.7
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 6.5e-62 241.1 196 67.9
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 6.5e-62 241.1 194 71.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 6.5e-62 241.1 193 72.0
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 8.4e-62 240.7 188 71.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.1e-61 240.4 188 72.9
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.1e-61 240.4 188 71.8
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.4e-61 240.0 153 82.4
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.9e-61 239.6 196 70.4
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.5e-61 239.2 154 82.5
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 2.5e-61 239.2 196 67.9
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.2e-61 238.8 193 70.5
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.2e-61 238.8 199 67.8
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.2e-61 238.8 147 87.1
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 4.2e-61 238.4 188 70.7
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 4.2e-61 238.4 196 69.4
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 7.1e-61 237.7 188 71.3
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 9.3e-61 237.3 139 88.5
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 1.6e-60 236.5 196 69.4
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 2.1e-60 236.1 196 69.9
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 3.5e-60 235.3 188 73.4
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.5e-60 235.3 162 77.8
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.0e-59 233.8 153 81.0
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 1.3e-59 233.4 198 65.7
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 3.0e-59 232.3 192 68.8
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.0e-59 232.3 147 84.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 3.9e-59 231.9 197 68.5
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 5.1e-59 231.5 148 81.1
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 6.7e-59 231.1 149 81.9
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 8.7e-59 230.7 196 67.9
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.9e-58 229.6 149 81.9
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.5e-58 229.2 149 81.2
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.3e-58 228.4 144 83.3
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 4.3e-58 228.4 164 76.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.7e-58 228.0 145 82.8
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 7.4e-58 227.6 189 69.8
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 9.6e-58 227.3 196 68.4
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 9.6e-58 227.3 148 79.1
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.6e-58 227.3 155 80.6
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 9.6e-58 227.3 187 69.5
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.1e-57 226.1 187 69.0
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.8e-57 225.7 150 84.0
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.7e-57 225.3 154 79.2
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.7e-57 225.3 155 78.7
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 4.8e-57 224.9 188 69.1
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 8.2e-57 224.2 139 84.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.1e-56 223.8 192 66.1
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.1e-56 223.8 148 79.7
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.4e-56 223.4 147 79.6
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.4e-56 223.4 150 80.7
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.8e-56 223.0 187 68.4
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.4e-56 222.6 161 76.4
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 2.4e-56 222.6 193 66.3
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 4.0e-56 221.9 191 66.5
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 4.0e-56 221.9 187 67.9
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 5.3e-56 221.5 196 65.8
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 9.0e-56 220.7 187 67.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.5e-55 219.9 139 83.5
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 1.5e-55 219.9 149 77.9
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.5e-55 219.9 141 81.6
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.0e-55 219.5 193 65.3
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.4e-55 218.8 148 82.4
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 4.5e-55 218.4 150 80.7
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.5e-55 218.4 193 65.8
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 4.5e-55 218.4 144 81.9
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 7.6e-55 217.6 148 79.1
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 7.6e-55 217.6 204 62.3
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 7.6e-55 217.6 154 77.9
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.0e-54 217.2 140 85.0
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.3e-54 216.9 150 78.7
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.7e-54 216.5 140 84.3
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.7e-54 216.5 150 79.3
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.2e-54 216.1 145 82.1
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 2.9e-54 215.7 193 65.8
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.8e-54 215.3 147 81.6
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.8e-54 215.3 150 80.0
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 5.0e-54 214.9 140 82.1
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.0e-54 214.9 190 64.7
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 8.4e-54 214.2 186 69.4
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.4e-53 213.4 140 82.9
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.4e-53 213.4 195 62.6
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.9e-53 213.0 149 78.5
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.2e-53 211.8 176 68.8
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 4.2e-53 211.8 141 80.9
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 4.2e-53 211.8 141 80.9
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 4.2e-53 211.8 141 80.9
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 4.2e-53 211.8 141 80.9
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 7.1e-53 211.1 147 76.9
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 9.3e-53 210.7 151 74.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.6e-52 209.9 151 79.5
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 2.1e-52 209.5 140 80.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.1e-52 209.5 174 70.7
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 6.1e-52 208.0 188 64.4
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 7.9e-52 207.6 144 80.6
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 3.0e-51 205.7 135 83.7
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.1e-50 203.8 139 77.7
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 3.3e-50 202.2 144 77.1
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 4.3e-50 201.8 144 76.4
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 5.7e-50 201.4 139 77.0
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 9.7e-50 200.7 115 91.3
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.6e-49 199.9 162 71.0
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.8e-48 196.4 196 60.2
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.8e-48 196.4 175 63.4
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.4e-48 196.1 112 91.1
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 6.9e-48 194.5 140 79.3
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 6.9e-48 194.5 168 68.5
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.6e-47 192.6 142 75.4
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.5e-47 191.8 114 86.8
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.5e-47 191.8 114 86.8
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-46 190.3 112 88.4
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.3e-46 190.3 198 57.6
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 3.8e-46 188.7 112 86.6
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 8.5e-46 187.6 148 68.2
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.4e-45 184.1 190 59.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.4e-45 184.1 190 59.5
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.1e-44 181.4 187 59.4
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.4e-43 180.3 137 67.2
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 3.9e-43 178.7 155 65.2
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.7e-43 177.9 140 68.6
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.1e-42 177.2 109 80.7
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 5.7e-42 174.9 111 83.8
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 2.8e-41 172.6 141 68.1
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 4.8e-41 171.8 161 65.2
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 2.6e-39 166.0 163 62.6
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.5e-39 165.2 142 60.6
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 7.7e-39 164.5 110 78.2
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.1e-37 160.6 127 69.3
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 3.2e-37 159.1 111 72.1
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 3.2e-37 159.1 113 72.6
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 3.2e-37 159.1 341 36.1
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 9.4e-37 157.5 159 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 3.9e-35 152.1 115 68.7
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 5.2e-27 125.2 78 83.3
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 2.6e-26 122.9 111 55.9
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 5.9e-23 111.7 130 47.7
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 3.2e-21 105.9 91 64.8
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 4.2e-21 105.5 91 65.9
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-20 103.6 85 67.1
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 6.1e-20 101.7 86 68.6
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 4.0e-19 99.0 86 67.4
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 4.0e-19 99.0 86 67.4
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.3e-17 94.0 84 60.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 8.5e-14 81.3 44 95.5
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 3.6e-12 75.9 49 81.6
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 8.0e-12 74.7 47 80.9
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 6.3e-09 65.1 39 82.1
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.6e-06 54.7 83 43.4


User provided reference genes

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