Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 2.5e-229 798.5 435 100.0
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 7.5e-165 584.3 435 72.2
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 6.9e-134 481.5 435 68.5
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.8e-129 466.8 420 69.0
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.5e-112 410.6 395 61.3
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 1.4e-107 394.0 321 75.1
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 2.1e-90 337.0 453 45.9
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 1.2e-88 331.3 452 50.9
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.4e-88 329.7 452 44.7
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 4.5e-85 319.3 439 45.6
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 5.9e-85 318.9 454 45.4
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 1.7e-84 317.4 450 44.9
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 8.0e-82 308.5 452 43.4
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 2.8e-79 300.1 455 45.1
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 4.9e-79 299.3 451 44.1
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 5.9e-77 292.4 459 44.2
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 7.7e-77 292.0 463 41.3
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.3e-76 290.4 456 46.7
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 3.8e-76 289.7 443 48.3
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 6.8e-73 278.9 391 44.0
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 4.4e-72 276.2 470 39.8
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.3e-71 274.6 437 44.9
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 7.8e-69 265.4 440 40.0
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 7.8e-69 265.4 443 38.4
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.7e-68 264.2 438 40.6
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 8.6e-68 261.9 450 38.4
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 1.1e-67 261.5 438 45.7
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 2.5e-67 260.4 427 47.1
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 2.6e-64 250.4 458 37.8
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 2.6e-64 250.4 435 43.7
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.7e-63 247.7 518 36.9
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 2.9e-63 246.9 447 38.3
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 2.9e-63 246.9 435 39.3
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 4.9e-63 246.1 435 39.5
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.4e-63 245.7 457 38.3
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 6.4e-63 245.7 453 39.3
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 3.2e-62 243.4 450 38.0
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 1.0e-60 238.4 476 42.0
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.0e-60 238.4 415 40.7
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.3e-60 238.0 438 37.7
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 3.0e-60 236.9 393 42.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 3.9e-60 236.5 523 36.3
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.3e-59 233.4 444 37.6
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 9.5e-59 231.9 503 35.2
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.2e-58 231.5 437 38.2
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.8e-58 230.3 458 37.6
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 2.8e-58 230.3 275 48.0
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 6.2e-58 229.2 433 43.9
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 1.3e-55 221.5 456 38.4
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 8.3e-55 218.8 437 37.5
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 5.1e-52 209.5 445 36.9
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 5.1e-52 209.5 398 37.4
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 8.6e-52 208.8 462 39.8
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 8.6e-52 208.8 468 34.8
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 2.5e-51 207.2 431 35.5
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 2.5e-51 207.2 417 38.6
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 2.1e-50 204.1 580 32.2
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 3.1e-49 200.3 487 35.7
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 2.0e-48 197.6 431 36.0
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 3.4e-48 196.8 467 36.0
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 5.8e-48 196.1 431 36.9
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.3e-47 194.9 431 35.7
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.3e-47 194.9 482 36.5
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.3e-47 194.9 439 35.3
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.7e-47 194.5 465 34.2
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 3.7e-47 193.4 378 36.0
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 1.1e-46 191.8 443 35.4
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 1.9e-46 191.0 464 34.3
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 7.1e-46 189.1 354 37.6
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 3.5e-45 186.8 454 33.3
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 3.5e-45 186.8 437 34.8
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.5e-45 186.8 314 41.4
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.3e-44 184.9 429 35.4
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 1.3e-44 184.9 454 34.8
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.7e-44 184.5 391 36.1
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 3.9e-44 183.3 476 34.7
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.5e-43 181.4 456 35.7
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.9e-43 181.0 411 34.8
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 1.9e-43 181.0 437 33.6
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 2.5e-43 180.6 372 37.1
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 7.3e-43 179.1 443 30.7
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.6e-42 177.9 429 34.7
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 3.6e-42 176.8 403 39.0
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 3.6e-42 176.8 405 39.8
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 6.2e-42 176.0 432 35.0
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 8.9e-41 172.2 478 33.5
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 4.9e-39 166.4 453 31.6
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 4.6e-37 159.8 427 39.1
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 1.0e-36 158.7 491 30.8
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.1e-35 155.2 424 33.3
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 7.3e-35 152.5 440 33.2
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 1.6e-34 151.4 463 34.6
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 3.6e-34 150.2 215 40.0
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 4.8e-34 149.8 450 32.7
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-34 149.8 508 28.5
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 8.1e-34 149.1 487 34.1
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 1.3e-31 141.7 372 33.3
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.7e-31 141.4 443 29.6
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.9e-31 139.8 142 54.2
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.6e-29 134.8 533 26.5
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 3.0e-28 130.6 408 29.2
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 3.3e-27 127.1 359 30.4
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.3e-26 125.2 406 30.5
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 1.1e-25 122.1 456 29.8
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 7.6e-24 115.9 537 30.7
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 9.9e-24 115.5 294 33.7
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.2e-22 110.2 88 60.2
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 3.5e-21 107.1 161 42.9
RcHm_v2.0_Chr2g0160061 Rosa chinensis HOM05D005864 ORTHO05D006770 1.8e-17 94.7 197 40.6
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 6.5e-15 86.3 400 27.2
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 3.2e-14 84.0 243 31.3
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 1.0e-12 79.0 242 36.0
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 5.1e-12 76.6 52 69.2
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.7e-10 70.5 138 39.1
Ca_27661_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.1e-09 67.0 160 35.6
Ca_27662_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.1e-09 67.0 160 35.6
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 2.6e-08 64.3 233 28.3
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 1.0e-07 62.4 119 32.8
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.0e-07 62.4 41 68.3
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.2e-07 61.2 41 68.3
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.1e-06 58.9 104 41.3
TAR353G0003 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.5e-06 57.8 38 68.4


User provided reference genes

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