Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 2.4e-158 562.4 341 100.0
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.6e-122 442.2 346 73.4
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 4.7e-122 441.8 359 80.5
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 5.8e-120 434.9 346 72.8
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.9e-119 431.8 351 70.4
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.9e-115 419.9 343 77.3
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 6.6e-108 394.8 348 69.0
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 9.6e-107 391.0 350 66.0
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 1.6e-106 390.2 334 70.4
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 7.6e-104 381.3 353 67.4
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 9.9e-104 380.9 347 66.9
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.3e-103 380.6 347 65.7
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.9e-102 376.7 347 66.3
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 2.7e-101 372.9 352 68.2
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.0e-100 370.9 357 64.1
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.4e-97 360.5 355 64.2
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 4.0e-97 359.0 272 75.4
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 5.3e-97 358.6 360 63.3
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 6.9e-97 358.2 359 57.1
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 4.5e-96 355.5 349 61.6
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.3e-95 354.0 358 56.1
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.9e-94 350.1 344 64.8
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 4.2e-94 349.0 367 55.0
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 5.5e-94 348.6 353 60.1
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 9.3e-94 347.8 359 56.0
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.6e-93 347.1 358 56.1
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 2.7e-93 346.3 369 63.1
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 4.6e-93 345.5 358 67.0
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 7.9e-93 344.7 362 58.0
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 7.9e-93 344.7 352 63.1
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 8.7e-92 341.3 352 61.1
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 5.7e-91 338.6 351 61.5
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 7.4e-91 338.2 345 64.9
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 3.7e-90 335.9 352 63.1
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 1.8e-89 333.6 378 54.2
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 2.4e-89 333.2 351 59.0
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 6.9e-89 331.6 366 58.5
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 9.0e-89 331.3 369 53.7
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 1.2e-88 330.9 359 58.5
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 4.5e-88 328.9 362 55.5
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 4.5e-88 328.9 351 57.0
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 8.5e-87 324.7 342 55.0
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 1.9e-86 323.6 358 58.4
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 3.6e-85 319.3 365 66.0
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 4.6e-85 318.9 364 55.2
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.0e-84 317.8 348 57.2
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 1.0e-84 317.8 361 57.1
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 1.3e-84 317.4 347 58.8
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 3.0e-84 316.2 366 57.1
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 6.9e-81 305.1 363 59.5
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 3.4e-80 302.8 365 63.0
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 3.8e-79 299.3 343 53.1
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 8.5e-79 298.1 368 53.0
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 3.2e-78 296.2 360 52.2
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 1.2e-77 294.3 350 53.7
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 2.1e-77 293.5 346 59.0
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 1.7e-74 283.9 365 54.2
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 5.3e-73 278.9 340 55.6
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 3.4e-72 276.2 277 58.1
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.9e-70 270.4 371 51.2
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.5e-70 270.0 362 45.6
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 7.2e-70 268.5 368 44.3
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 1.2e-69 267.7 376 47.9
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 2.1e-69 266.9 353 47.3
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 2.1e-69 266.9 377 49.1
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.1e-69 266.9 352 54.0
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 2.7e-69 266.5 346 49.4
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 1.1e-67 261.2 353 47.0
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 4.4e-67 259.2 341 47.5
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 5.7e-67 258.8 347 49.0
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.3e-66 257.7 359 47.4
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 3.7e-66 256.1 359 49.0
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 8.2e-66 255.0 339 47.2
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 1.4e-65 254.2 359 50.1
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 9.1e-65 251.5 346 48.8
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 1.2e-64 251.1 356 48.9
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 1.6e-64 250.8 350 52.9
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 4.5e-64 249.2 346 49.1
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 4.5e-64 249.2 346 49.1
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 4.5e-64 249.2 346 49.1
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 5.9e-64 248.8 366 48.9
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-63 247.3 335 51.3
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 8.5e-63 245.0 336 50.3
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.1e-62 244.6 341 48.7
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 1.5e-62 244.2 350 47.7
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.9e-62 243.8 292 50.7
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 7.2e-62 241.9 351 47.0
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.6e-61 240.7 353 46.5
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 2.1e-61 240.4 295 59.7
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.7e-61 240.0 347 45.5
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 3.6e-61 239.6 347 49.3
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.5e-59 234.2 355 44.5
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 2.6e-59 233.4 342 44.4
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.8e-58 229.9 351 45.3
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 2.8e-58 229.9 365 51.2
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 3.7e-58 229.6 362 44.5
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 3.1e-57 226.5 375 46.4
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.6e-56 224.2 358 46.4
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.6e-56 224.2 363 50.4
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 1.0e-55 221.5 360 43.9
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.9e-55 219.9 343 48.4
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 6.5e-55 218.8 346 46.2
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 6.5e-55 218.8 345 51.3
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 2.5e-54 216.9 350 47.4
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 5.5e-54 215.7 333 48.3
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 1.2e-53 214.5 344 45.6
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 1.2e-53 214.5 347 43.5
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 2.1e-53 213.8 356 46.3
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 4.7e-53 212.6 284 49.6
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.4e-52 211.1 337 46.0
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.4e-52 211.1 345 42.3
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 2.3e-52 210.3 337 42.7
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 1.5e-51 207.6 367 47.7
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 2.6e-51 206.8 337 45.7
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 4.4e-51 206.1 367 44.4
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 7.5e-51 205.3 345 45.2
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 1.3e-50 204.5 346 41.3
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 1.3e-50 204.5 346 41.3
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 6.3e-50 202.2 344 41.0
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 6.3e-50 202.2 238 56.7
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 6.3e-50 202.2 367 45.0
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 8.3e-50 201.8 344 41.0
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-49 201.4 344 41.0
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.8e-49 200.7 367 49.6
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.8e-49 200.7 367 49.6
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.8e-49 200.7 367 49.6
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 3.1e-49 199.9 352 44.3
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 5.4e-49 199.1 353 39.9
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 3.5e-48 196.4 234 52.6
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 5.9e-48 195.7 339 44.8
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.5e-46 191.0 352 43.5
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 4.2e-46 189.5 373 42.4
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 7.2e-46 188.7 349 39.5
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 7.2e-46 188.7 352 42.3
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 9.5e-46 188.3 355 39.2
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 1.2e-45 188.0 303 39.3
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 8.0e-45 185.3 354 41.2
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 1.5e-43 181.0 336 37.5
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 2.0e-43 180.6 351 42.2
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-43 179.5 351 39.6
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-43 179.5 351 39.6
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 4.4e-43 179.5 351 39.6
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 5.7e-43 179.1 350 39.1
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.7e-42 177.6 161 59.0
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 1.6e-40 171.0 338 37.6
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 1.0e-39 168.3 354 37.6
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 6.6e-39 165.6 338 37.0
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 3.6e-37 159.8 319 44.2
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-34 151.0 338 34.9
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 9.2e-33 145.2 216 41.7
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 4.6e-32 142.9 347 32.6
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 1.0e-31 141.7 352 33.2
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 1.3e-31 141.4 417 32.9
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 1.3e-31 141.4 359 38.4
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 1.7e-31 141.0 338 33.7
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 2.3e-31 140.6 388 31.7
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 1.9e-30 137.5 253 39.5
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 7.3e-30 135.6 347 34.3
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 2.1e-29 134.0 333 30.6
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 5.2e-28 129.4 355 33.5
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 1.2e-27 128.3 431 30.9
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 6.4e-26 122.5 336 34.5
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 2.0e-24 117.5 352 38.6
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 7.8e-24 115.5 202 41.6
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 2.9e-18 97.1 349 37.5
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 4.9e-18 96.3 174 39.1
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 1.2e-16 91.7 365 42.2
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 5.6e-14 82.8 185 36.8
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 8.1e-13 79.0 107 51.4
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.3e-12 77.4 168 39.3
BcaB03g11901 Brassica carinata HOM05D003923 ORTHO05D004553 5.8e-11 72.8 100 47.0
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 1.3e-10 71.6 147 34.0
BcaC07g38451 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-07 62.0 93 45.2
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 3.0e-07 60.5 305 25.6
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 5.1e-07 59.7 220 26.4
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 8.6e-07 58.9 338 24.3
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 4.3e-06 56.6 333 23.1
BolC8t49783H Brassica oleracea HOM05D003923 ORTHO05D004553 5.6e-06 56.2 98 36.7
SEGI_02629 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 9.6e-06 55.5 200 30.0


User provided reference genes

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