Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 0.0e+00 1545.4 791 100.0
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 0.0e+00 1174.1 791 77.1
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 0.0e+00 1112.8 790 73.2
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 0.0e+00 1086.2 784 73.9
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 0.0e+00 1078.5 804 71.3
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 6.5e-311 1070.5 892 65.7
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.0e-300 1036.6 803 69.9
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.3e-297 1025.4 787 69.8
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 5.7e-296 1020.8 791 68.6
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 4.5e-293 1011.1 794 67.8
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 7.8e-293 1010.4 801 67.5
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 3.8e-292 1008.1 792 68.3
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 5.0e-292 1007.7 792 67.4
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 6.8e-289 997.3 781 69.5
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 8.9e-289 996.9 797 67.1
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.0e-288 995.7 802 66.8
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.4e-286 989.6 790 66.7
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 1.2e-285 986.5 795 66.4
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 7.8e-285 983.8 785 66.4
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 1.7e-284 982.6 815 65.4
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 5.0e-284 981.1 824 64.3
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 8.6e-284 980.3 809 65.0
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.5e-283 979.5 785 66.2
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 7.3e-283 977.2 827 64.8
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.1e-282 975.7 790 67.5
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 1.4e-278 963.0 804 64.9
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.4e-278 963.0 779 67.7
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 1.9e-278 962.6 791 66.0
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 5.4e-278 961.1 779 67.3
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 5.0e-276 954.5 789 64.5
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.3e-275 951.4 792 66.5
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 9.5e-275 950.3 810 63.1
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.1e-273 945.3 837 63.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 6.8e-273 944.1 791 64.3
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.6e-272 942.2 759 66.4
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 3.4e-272 941.8 792 63.5
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 4.4e-272 941.4 792 65.0
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.1e-269 932.6 797 64.1
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 4.6e-269 931.4 801 63.7
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 4.6e-269 931.4 792 64.5
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 8.6e-268 927.2 796 63.6
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 8.6e-268 927.2 791 64.5
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 9.5e-267 923.7 799 62.7
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.6e-266 922.9 792 62.2
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 5.2e-265 917.9 803 63.5
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 8.9e-265 917.1 792 62.1
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 8.9e-265 917.1 842 59.0
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 6.4e-263 911.0 789 62.6
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 4.6e-261 904.8 795 63.9
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.0e-260 903.7 792 61.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.7e-260 902.9 793 61.7
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.7e-260 902.9 820 60.1
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 8.7e-260 900.6 797 61.7
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.1e-259 900.2 801 60.7
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.5e-259 899.8 803 62.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 6.9e-257 891.0 801 61.5
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.3e-255 886.7 802 60.7
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.7e-255 886.3 797 61.1
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 9.3e-254 880.6 743 62.7
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 6.0e-253 877.9 799 58.6
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.3e-252 875.9 802 61.7
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 6.6e-252 874.4 787 61.0
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 4.3e-251 871.7 803 57.9
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.8e-249 866.3 790 59.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 5.8e-248 861.3 809 60.2
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 4.9e-247 858.2 799 59.6
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.1e-246 857.1 797 59.2
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.4e-246 855.9 799 58.7
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 2.4e-246 855.9 731 62.2
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 1.0e-244 850.5 795 59.4
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 3.9e-244 848.6 797 59.5
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.8e-241 839.7 700 65.3
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 2.4e-241 839.3 784 58.2
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.5e-240 836.6 806 58.1
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 3.4e-240 835.5 795 58.5
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 3.8e-239 832.0 795 58.1
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.4e-238 830.1 794 57.9
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 4.2e-238 828.6 795 58.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 5.5e-238 828.2 772 59.1
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.6e-237 826.6 793 57.6
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 2.3e-236 822.8 798 57.4
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 4.8e-226 788.5 708 60.9
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 1.2e-221 773.9 798 55.5
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 7.4e-219 764.6 700 59.3
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 1.3e-218 763.8 599 66.4
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 2.5e-206 723.0 584 67.6
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 4.2e-206 722.2 852 49.8
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 4.2e-198 695.7 795 50.1
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.8e-196 690.3 408 82.4
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.2e-192 677.6 485 71.3
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 4.8e-186 655.6 726 51.5
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 4.8e-186 655.6 754 50.4
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 8.3e-186 654.8 599 58.3
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 5.5e-182 642.1 499 69.1
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.8e-180 637.1 793 49.7
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 6.8e-180 635.2 642 54.5
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 4.5e-176 622.5 791 47.9
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 3.5e-168 596.3 572 56.8
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 5.2e-164 582.4 486 64.6
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 1.9e-161 573.9 457 68.5
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 1.1e-142 511.5 416 65.4
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 5.3e-108 396.4 768 35.8
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.5e-97 359.8 273 72.2
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 7.0e-92 342.8 222 76.6
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.8e-87 328.2 467 45.2
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 9.7e-86 322.4 654 33.5
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 2.4e-84 317.8 222 75.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.7e-82 311.6 720 33.3
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 2.2e-82 311.2 732 33.1
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.8e-76 291.6 967 28.5
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 2.9e-61 241.1 289 48.1
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 4.4e-54 217.2 144 75.0
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 4.3e-41 174.1 149 63.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.0e-38 165.2 99 81.8
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 3.7e-37 161.0 219 44.3
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 5.4e-36 157.1 144 63.9
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 3.6e-24 117.9 66 81.8
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 2.4e-20 105.1 88 65.9
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 4.6e-19 100.9 107 57.0
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 8.1e-16 90.1 143 44.1
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 1.6e-11 75.9 554 20.0
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 7.9e-11 73.6 45 77.8
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 7.9e-11 73.6 45 77.8
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 1.0e-10 73.2 265 30.2
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.3e-08 66.2 64 54.7
Aqoxy6G02680 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 4.5e-06 57.8 62 50.0


User provided reference genes

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