Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1367.8 706 100.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1367.8 706 100.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 0.0e+00 1151.7 701 82.6
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 0.0e+00 1139.0 703 83.5
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 0.0e+00 1107.0 707 79.9
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 0.0e+00 1088.2 705 79.4
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 0.0e+00 1083.2 707 77.1
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 0.0e+00 1077.0 671 81.1
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 2.6e-308 1061.6 667 81.3
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 4.5e-308 1060.8 712 77.7
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.9e-304 1047.7 674 79.5
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 1.9e-303 1045.4 695 75.8
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.9e-303 1045.4 701 75.6
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.1e-301 1039.6 709 75.6
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 2.4e-301 1038.5 670 77.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.0e-299 1033.1 709 74.2
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.2e-299 1031.9 664 77.7
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.1e-298 1029.6 730 74.1
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.9e-298 1028.9 705 73.5
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 3.2e-298 1028.1 673 76.8
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 4.2e-298 1027.7 669 77.3
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 2.1e-297 1025.4 674 77.2
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.3e-296 1021.9 664 77.6
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 6.7e-296 1020.4 709 73.3
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.3e-295 1018.1 664 77.3
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 9.7e-295 1016.5 664 76.8
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 1.3e-294 1016.1 666 76.6
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 5.3e-293 1010.7 664 76.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 6.9e-293 1010.4 696 74.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 3.4e-292 1008.1 665 76.5
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.4e-292 1008.1 665 76.4
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 5.9e-292 1007.3 710 73.0
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 2.9e-291 1005.0 669 75.8
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.9e-291 1005.0 696 73.7
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 3.8e-291 1004.6 672 77.8
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 3.8e-291 1004.6 700 74.0
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.1e-290 1003.0 674 76.1
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.4e-290 1002.7 670 76.3
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.4e-290 1002.7 747 68.9
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 1.4e-290 1002.7 691 73.5
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.1e-289 998.8 674 75.5
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 4.6e-289 997.7 666 75.5
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 6.1e-289 997.3 668 75.0
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.8e-288 995.7 701 72.9
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 1.8e-288 995.7 671 74.7
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.3e-288 995.3 672 73.4
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 8.8e-288 993.4 667 74.5
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.2e-286 988.8 673 73.4
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.8e-286 988.4 710 70.6
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 8.2e-286 986.9 604 82.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 6.9e-285 983.8 673 74.4
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.5e-284 982.6 726 70.0
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 1.3e-283 979.5 666 73.7
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.3e-283 979.5 667 73.9
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 2.9e-283 978.4 682 73.9
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 1.4e-282 976.1 667 74.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.4e-280 969.5 666 72.8
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 5.1e-280 967.6 699 72.5
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 3.3e-279 964.9 668 73.2
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.8e-277 959.1 668 72.9
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 2.4e-277 958.7 714 70.0
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 7.0e-277 957.2 667 72.9
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 9.1e-277 956.8 751 66.7
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 1.7e-275 952.6 670 71.8
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 2.2e-275 952.2 669 72.0
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 6.5e-275 950.7 665 71.9
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 8.5e-275 950.3 665 71.9
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 4.2e-274 948.0 702 70.7
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.2e-273 946.4 698 69.3
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 2.1e-273 945.7 665 71.7
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 2.7e-273 945.3 665 71.6
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.0e-272 943.3 664 73.3
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 6.7e-272 940.6 672 71.9
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 3.1e-269 931.8 660 71.5
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 5.9e-268 927.5 588 79.6
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 7.7e-268 927.2 667 70.3
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.6e-265 918.3 710 68.5
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.1e-261 906.7 669 69.2
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 2.5e-258 895.6 664 70.8
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.6e-257 892.9 675 67.6
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.6e-255 885.6 595 73.6
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 9.8e-255 883.6 577 77.3
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 2.8e-254 882.1 705 67.7
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 8.9e-248 860.5 669 65.9
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 5.7e-247 857.8 573 75.9
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 3.7e-246 855.1 588 72.4
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.8e-240 836.3 649 65.2
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.0e-235 818.9 631 68.1
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 3.9e-235 818.5 578 71.3
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.3e-234 815.5 575 72.0
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 8.4e-214 747.7 1244 40.0
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 5.1e-203 711.8 427 84.3
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.3e-185 654.1 633 55.3
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 9.3e-181 637.9 633 53.4
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.3e-179 633.3 656 53.0
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 2.5e-178 629.8 646 52.6
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.4e-176 623.2 422 75.4
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.5e-175 619.0 400 77.0
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 5.3e-168 595.5 405 70.6
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.3e-133 479.9 333 71.2
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 3.3e-133 479.9 613 45.0
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.1e-132 477.2 726 41.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 5.4e-128 462.6 476 51.9
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.1e-120 438.3 273 77.3
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.3e-110 404.8 225 89.8
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.1e-104 383.3 312 66.0
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.8e-100 370.5 315 63.5
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.1e-99 368.6 462 50.4
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 4.3e-93 346.7 625 39.7
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 4.4e-90 336.7 280 66.4
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 5.8e-90 336.3 203 82.3
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.9e-85 321.2 203 78.3
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.9e-77 294.7 250 62.8
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-63 248.8 155 79.4
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 8.2e-52 209.5 148 68.9
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.8e-46 191.8 144 69.4
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 3.1e-43 181.0 203 53.2
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.8e-35 155.2 102 72.5
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.0e-33 149.4 198 49.0
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 8.3e-28 129.8 173 52.0
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.8e-27 128.6 97 66.0
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 6.1e-23 113.6 100 60.0
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.7e-20 104.4 123 43.1
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.8e-19 102.1 68 69.1
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 1.6e-15 89.0 53 75.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 9.2e-11 73.2 68 54.4


User provided reference genes

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