Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-69 266.5 134 100.0
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-69 266.5 134 100.0
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-69 266.5 134 100.0
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 3.3e-63 245.0 131 93.9
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.8e-61 239.2 131 90.8
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.1e-61 238.4 131 91.6
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.2e-59 232.3 131 88.5
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 6.5e-59 230.7 131 88.5
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 8.5e-59 230.3 132 86.4
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 8.5e-59 230.3 133 86.5
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 1.1e-58 229.9 132 86.4
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.5e-58 229.6 131 87.8
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 5.5e-58 227.6 136 84.6
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 7.2e-58 227.3 131 82.4
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.2e-57 226.5 133 88.0
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 1.6e-57 226.1 131 84.7
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.6e-57 226.1 131 86.3
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.1e-57 225.7 131 85.5
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 4.7e-57 224.6 131 81.7
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 4.7e-57 224.6 131 86.3
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.7e-57 224.6 134 84.3
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 6.1e-57 224.2 131 80.9
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 6.1e-57 224.2 131 85.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 6.1e-57 224.2 131 86.3
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 1.0e-56 223.4 131 84.0
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.0e-56 223.4 131 85.5
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 1.0e-56 223.4 131 87.0
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.4e-56 223.0 132 83.3
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 1.4e-56 223.0 134 85.1
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.4e-56 223.0 131 84.0
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.4e-56 223.0 130 83.1
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.8e-56 222.6 131 84.7
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-56 222.2 131 84.7
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-56 222.2 131 84.7
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 4.0e-56 221.5 131 81.7
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 4.0e-56 221.5 131 84.7
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.2e-56 221.1 131 84.0
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 8.8e-56 220.3 131 84.7
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.2e-55 219.9 131 84.7
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 1.5e-55 219.5 131 83.2
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.0e-55 219.2 131 83.2
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 2.0e-55 219.2 131 82.4
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.6e-55 218.8 132 81.1
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.4e-55 218.0 131 84.0
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.7e-55 217.6 131 82.4
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 9.8e-55 216.9 131 80.9
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 9.8e-55 216.9 131 83.2
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.3e-54 216.5 131 83.2
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.7e-54 216.1 131 80.9
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.7e-54 216.1 132 80.3
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.7e-54 216.1 132 82.6
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.8e-54 215.3 131 80.9
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.8e-54 215.3 131 80.2
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 3.7e-54 214.9 131 80.2
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.7e-54 214.9 130 83.1
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 4.8e-54 214.5 131 79.4
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 4.8e-54 214.5 128 81.2
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 4.8e-54 214.5 131 80.2
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.8e-54 214.5 134 82.1
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 4.8e-54 214.5 134 76.1
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 8.3e-54 213.8 133 77.4
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 8.3e-54 213.8 131 79.4
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 8.3e-54 213.8 131 79.4
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.1e-53 213.4 125 82.4
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 1.4e-53 213.0 131 78.6
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 1.8e-53 212.6 131 77.1
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 3.1e-53 211.8 131 78.6
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 7.0e-53 210.7 133 82.0
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.0e-53 210.7 131 78.6
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 9.1e-53 210.3 132 78.8
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 9.1e-53 210.3 131 77.9
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.2e-52 209.9 133 78.2
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.2e-52 209.9 133 81.2
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 1.2e-52 209.9 131 77.9
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.6e-52 209.5 131 77.1
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.6e-52 209.5 133 81.2
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.6e-52 209.5 133 81.2
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.6e-52 209.5 133 82.0
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 2.0e-52 209.1 119 87.4
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 2.7e-52 208.8 131 80.9
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 5.9e-52 207.6 131 77.9
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 7.7e-52 207.2 133 76.7
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 7.7e-52 207.2 131 77.9
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.0e-51 206.8 133 77.4
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.0e-51 206.8 133 75.9
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.0e-51 206.8 131 77.1
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 77.9
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 77.9
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.7e-51 206.1 133 76.7
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.7e-51 206.1 131 80.9
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.7e-51 206.1 133 80.5
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 2.2e-51 205.7 131 74.8
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 2.2e-51 205.7 131 74.8
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 3.8e-51 204.9 133 75.2
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 3.8e-51 204.9 133 75.2
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 3.8e-51 204.9 131 74.8
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 5.0e-51 204.5 131 75.6
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 5.0e-51 204.5 133 75.2
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 6.5e-51 204.1 133 74.4
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 6.5e-51 204.1 131 77.1
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 6.5e-51 204.1 117 82.1
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 8.5e-51 203.8 133 76.7
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 8.5e-51 203.8 131 75.6
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 8.5e-51 203.8 146 75.3
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.5e-51 203.8 131 77.9
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.1e-50 203.4 131 72.5
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.1e-50 203.4 134 75.4
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.5e-50 203.0 133 74.4
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-50 203.0 134 75.4
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 1.5e-50 203.0 134 75.4
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.5e-50 203.0 131 71.8
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.9e-50 202.6 134 75.4
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.9e-50 202.6 134 75.4
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.9e-50 202.6 134 75.4
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.9e-50 202.6 123 82.1
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 1.9e-50 202.6 131 73.3
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 5.5e-50 201.1 133 75.2
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 9.4e-50 200.3 132 74.2
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.2e-49 199.9 134 75.4
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.1e-49 199.1 131 70.2
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 2.1e-49 199.1 131 77.9
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 2.7e-49 198.7 110 83.6
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.7e-49 198.7 110 83.6
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 4.7e-49 198.0 131 73.3
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 4.7e-49 198.0 131 74.0
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.7e-49 198.0 120 84.2
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.0e-49 197.2 132 74.2
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 2.3e-48 195.7 139 74.8
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 3.0e-48 195.3 122 74.6
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 3.0e-48 195.3 119 77.3
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.0e-48 194.9 133 74.4
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 5.2e-48 194.5 131 71.0
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 6.8e-48 194.1 131 70.2
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 1.5e-47 193.0 118 78.8
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.6e-47 192.2 119 74.8
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 3.4e-47 191.8 121 78.5
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 4.4e-47 191.4 127 74.8
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 4.4e-47 191.4 131 69.5
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 2.8e-46 188.7 116 79.3
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 4.5e-44 181.4 128 71.1
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 7.7e-44 180.6 142 66.2
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 5.0e-43 177.9 123 70.7
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 1.1e-42 176.8 124 67.7
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 4.7e-41 171.4 131 59.5
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.8e-40 169.5 131 63.4
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.0e-40 168.3 91 89.0
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 7.5e-39 164.1 131 56.5
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.3e-38 163.3 115 68.7
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 5.6e-34 147.9 132 57.6
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.4e-32 143.3 115 56.5
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 2.2e-30 136.0 77 87.0
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 5.4e-29 131.3 85 81.2
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 6.0e-28 127.9 78 75.6
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.7e-27 126.3 75 82.7
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.1e-24 115.5 77 72.7
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.0e-24 115.2 76 73.7
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.2e-24 114.8 77 79.2
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.2e-22 109.4 79 64.6
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.7e-19 99.8 60 86.7
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 8.6e-19 97.4 56 80.4
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 1.3e-14 83.6 50 82.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 3.0e-11 72.4 45 71.1
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 2.5e-10 69.3 95 35.8
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.1e-08 62.4 43 69.8


User provided reference genes

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