Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 3.6e-124 448.4 241 100.0
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 2.4e-112 409.1 241 88.4
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 2.0e-111 406.0 241 88.4
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 5.9e-111 404.4 242 88.4
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.8e-110 401.7 242 88.0
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.8e-110 401.7 241 86.3
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 5.0e-110 401.4 241 88.0
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 3.3e-109 398.7 241 87.6
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.1e-108 396.0 241 85.5
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.6e-108 395.2 242 86.8
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 8.0e-108 394.0 242 85.5
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 4.0e-107 391.7 242 85.5
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 4.0e-107 391.7 220 93.2
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 1.5e-106 389.8 241 84.6
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 9.8e-106 387.1 241 85.1
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.9e-105 385.6 243 84.4
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 1.4e-104 383.3 241 82.2
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 5.4e-104 381.3 241 82.2
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 1.6e-103 379.8 241 83.0
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 2.0e-103 379.4 241 82.6
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 5.9e-103 377.9 241 83.0
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 5.9e-103 377.9 244 82.8
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 1.3e-102 376.7 241 82.2
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.3e-102 376.7 241 82.2
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 2.3e-102 375.9 241 83.0
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 2.3e-102 375.9 241 82.6
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 3.9e-102 375.2 282 73.8
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 5.0e-102 374.8 241 82.2
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 6.6e-102 374.4 240 82.5
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 1.1e-101 373.6 241 82.2
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.5e-101 373.2 241 80.9
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 1.9e-101 372.9 242 82.2
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 4.3e-101 371.7 241 80.5
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 1.2e-100 370.2 241 79.7
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 2.1e-100 369.4 242 81.0
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 2.8e-100 369.0 242 80.6
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 2.8e-100 369.0 242 81.4
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 4.7e-100 368.2 241 80.5
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 4.7e-100 368.2 241 80.1
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.0e-99 367.1 242 80.6
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.8e-99 366.3 242 80.2
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.8e-99 366.3 241 81.3
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 1.8e-99 366.3 241 80.9
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 4.0e-99 365.2 241 79.3
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.2e-98 363.6 241 79.7
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 3.4e-98 362.1 242 78.5
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 5.8e-98 361.3 242 79.8
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 1.7e-97 359.8 242 77.7
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 3.7e-97 358.6 224 83.5
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 1.4e-96 356.7 244 77.5
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 7.0e-96 354.4 244 77.9
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 7.0e-96 354.4 241 76.8
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 7.0e-96 354.4 242 76.4
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 1.6e-95 353.2 242 78.1
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 3.5e-95 352.1 237 77.6
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 6.0e-95 351.3 241 77.6
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 7.8e-95 350.9 242 77.3
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.0e-94 350.5 241 73.4
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 2.3e-94 349.4 244 76.2
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 5.0e-94 348.2 243 75.7
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 5.0e-94 348.2 238 78.2
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 3.3e-93 345.5 241 75.5
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 7.3e-93 344.4 240 75.8
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 1.2e-92 343.6 242 75.6
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 2.8e-92 342.4 237 76.4
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 6.2e-92 341.3 242 76.0
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 6.2e-92 341.3 221 81.4
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 1.8e-91 339.7 245 75.1
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 2.3e-91 339.3 222 81.5
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.3e-91 339.3 241 73.4
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 6.8e-91 337.8 241 72.2
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 6.8e-91 337.8 197 90.9
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 8.9e-91 337.4 196 90.3
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.5e-90 336.7 243 73.3
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 5.8e-90 334.7 245 75.9
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 7.5e-90 334.3 270 65.9
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 2.9e-89 332.4 241 71.8
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 3.7e-89 332.0 241 71.4
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 3.7e-89 332.0 241 71.8
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 4.9e-89 331.6 223 76.7
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 8.3e-89 330.9 241 71.8
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 8.3e-89 330.9 241 71.4
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 1.1e-88 330.5 196 86.7
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.9e-88 329.7 241 71.8
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.9e-88 329.7 241 71.8
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.9e-88 329.7 233 74.2
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 4.1e-88 328.6 241 71.0
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 4.1e-88 328.6 241 71.8
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 4.1e-88 328.6 241 71.4
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.1e-88 328.6 243 72.4
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 7.1e-88 327.8 228 75.9
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 7.1e-88 327.8 196 86.7
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 1.2e-87 327.0 243 74.1
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 2.1e-87 326.2 243 72.0
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.7e-87 325.9 244 71.3
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 4.6e-87 325.1 278 65.5
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 6.0e-87 324.7 241 71.0
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 7.8e-87 324.3 243 72.8
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 1.0e-86 323.9 242 71.1
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 1.0e-86 323.9 241 70.1
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 2.3e-86 322.8 246 73.6
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 3.0e-86 322.4 241 69.3
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 3.9e-86 322.0 280 65.4
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 6.6e-86 321.2 243 72.0
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 8.6e-86 320.9 243 71.6
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 1.1e-85 320.5 242 70.7
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 1.1e-85 320.5 242 70.7
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 1.9e-85 319.7 246 69.1
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 7.3e-85 317.8 258 69.4
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 9.5e-85 317.4 290 60.3
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 1.2e-84 317.0 244 70.1
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 1.6e-84 316.6 196 83.7
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 2.8e-84 315.8 196 85.2
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 4.7e-84 315.1 244 70.1
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 8.1e-84 314.3 287 62.7
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 4.0e-83 312.0 240 70.0
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 5.2e-83 311.6 196 82.1
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.2e-82 310.5 179 88.3
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.5e-82 310.1 258 67.8
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 1.5e-82 310.1 244 67.6
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.0e-82 309.7 199 81.9
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 2.0e-82 309.7 244 66.8
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.6e-82 309.3 199 81.4
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.6e-82 309.3 199 81.4
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 5.8e-82 308.1 198 79.3
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 7.6e-82 307.8 199 81.4
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 2.2e-81 306.2 231 71.4
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 6.4e-73 278.1 220 69.5
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 3.2e-72 275.8 196 72.4
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 7.1e-72 274.6 242 64.5
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 2.1e-71 273.1 175 82.3
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 5.3e-67 258.5 196 75.0
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 7.9e-63 244.6 188 67.6
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 8.7e-62 241.1 223 61.0
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 6.4e-57 224.9 135 85.9
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 7.9e-55 218.0 155 73.5
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 7.6e-50 201.4 155 67.1
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 5.3e-43 178.7 130 70.8
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 2.0e-42 176.8 149 65.1
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 3.4e-42 176.0 112 83.0
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.9e-41 172.9 167 58.7
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.2e-34 151.0 232 46.1
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 1.0e-33 147.9 198 43.4
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 3.8e-33 146.0 223 45.7
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 2.8e-28 129.8 235 33.6
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 3.7e-28 129.4 236 41.9
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 1.8e-27 127.1 209 37.3
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 2.5e-24 116.7 99 63.6
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 3.6e-23 112.8 82 72.0
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 9.7e-21 104.8 207 33.3
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 3.7e-20 102.8 209 34.0
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 9.1e-19 98.2 178 42.1
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 2.2e-17 93.6 63 79.4
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 4.0e-14 82.8 65 66.2
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 7.5e-13 78.6 64 68.8
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 1.9e-08 63.9 214 27.1
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 2.7e-07 60.1 41 80.5
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 4.7e-07 59.3 40 82.5
C06p01940 Brassica napus HOM05D004411 ORTHO05D032662 5.2e-06 55.8 92 43.5


User provided reference genes

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