Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 1.3e-75 286.2 135 100.0
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 1.7e-54 216.1 135 74.1
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 1.9e-53 212.6 136 75.0
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 3.2e-53 211.8 136 73.5
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 3.2e-53 211.8 135 69.6
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 7.0e-53 210.7 135 74.1
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 9.2e-53 210.3 131 72.5
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 9.2e-53 210.3 137 73.0
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 9.2e-53 210.3 135 71.9
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 7.8e-52 207.2 135 71.9
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 7.8e-52 207.2 135 71.9
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 1.7e-51 206.1 135 70.4
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 3.9e-51 204.9 135 72.6
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.9e-50 202.6 135 70.4
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 2.5e-50 202.2 135 70.4
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 1.6e-49 199.5 135 68.1
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 2.1e-49 199.1 135 68.9
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 2.1e-49 199.1 135 68.9
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 6.8e-48 194.1 135 65.9
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 2.6e-47 192.2 138 68.1
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 4.4e-47 191.4 138 67.4
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 4.4e-47 191.4 138 67.4
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 4.4e-47 191.4 138 67.4
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 5.8e-47 191.0 138 67.4
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 3.2e-45 185.3 139 69.1
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 5.4e-45 184.5 138 65.9
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 4.6e-44 181.4 137 60.6
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 4.6e-44 181.4 141 63.8
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 1.0e-43 180.3 136 65.4
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 1.0e-43 180.3 134 61.9
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 1.3e-43 179.9 140 66.4
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 1.3e-43 179.9 135 65.2
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 1.7e-43 179.5 138 63.8
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 1.7e-43 179.5 138 65.2
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 5.1e-43 177.9 127 67.7
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 8.6e-43 177.2 135 62.2
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 9.5e-42 173.7 131 62.6
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 1.2e-41 173.3 131 61.1
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 1.6e-41 172.9 138 61.6
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 2.8e-41 172.2 133 65.4
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 1.4e-40 169.9 141 60.3
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 3.1e-40 168.7 148 58.1
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 3.1e-40 168.7 148 58.1
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 5.2e-40 167.9 134 62.7
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 2.0e-39 166.0 140 59.3
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 5.8e-39 164.5 118 64.4
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 7.6e-39 164.1 136 58.8
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 1.3e-38 163.3 132 56.8
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 1.7e-38 162.9 137 57.7
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 4.9e-38 161.4 134 61.2
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 8.4e-38 160.6 136 58.1
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 3.2e-37 158.7 134 61.9
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 3.2e-37 158.7 115 65.2
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 1.0e-35 153.7 139 57.6
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 2.3e-35 152.5 136 59.6
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 2.3e-35 152.5 136 59.6
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 2.3e-35 152.5 181 46.4
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 1.9e-34 149.4 136 58.1
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 2.5e-34 149.1 146 57.5
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 5.6e-34 147.9 122 58.2
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 3.6e-33 145.2 105 66.7
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 1.4e-32 143.3 122 57.4
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.1e-28 129.4 103 61.2
Lalb_Chr09g0334261 Lupinus albus HOM05D007821 ORTHO05D009897 3.3e-26 122.1 78 73.1
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 2.8e-25 119.0 97 58.8
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 2.8e-25 119.0 136 47.1
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 1.4e-24 116.7 120 45.8
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 1.4e-24 116.7 120 45.8
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 9.0e-24 114.0 121 48.8
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 2.4e-21 105.9 147 44.2
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 3.5e-20 102.1 124 50.0
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 7.9e-20 100.9 115 47.0
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 1.5e-15 86.7 109 45.9
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 1.3e-14 83.6 96 46.9
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 1.7e-14 83.2 98 48.0
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 3.8e-14 82.0 108 42.6
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 3.8e-14 82.0 98 44.9
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 3.8e-14 82.0 108 42.6
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 6.4e-14 81.3 98 44.9
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 6.4e-14 81.3 98 44.9
Rhsim08G0030600 Rhododendron simsii HOM05D007821 ORTHO05D009897 8.4e-14 80.9 59 69.5
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 1.9e-13 79.7 108 42.6
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 2.4e-13 79.3 98 43.9
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 3.2e-13 79.0 97 45.4
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 5.5e-13 78.2 108 42.6
ATR1125G036 Amborella trichopoda HOM05D001188 ORTHO05D001032 9.6e-10 67.4 149 34.2
ClCG01G020560 Citrullus lanatus HOM05D007821 ORTHO05D009897 1.3e-09 67.0 57 57.9
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 3.7e-09 65.5 97 39.2
Ah.03g137620 Amaranthus hybridus HOM05D001188 ORTHO05D001032 4.8e-09 65.1 109 35.8
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 4.8e-09 65.1 88 37.5
CAN.G610.80 Capsicum annuum HOM05D001188 ORTHO05D001032 1.1e-08 63.9 112 35.7
CiPaw.04G042000 Carya illinoinensis HOM05D001188 ORTHO05D001032 1.8e-08 63.2 139 33.1
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 4.0e-08 62.0 147 33.3
Manes.05G137300 Manihot esculenta HOM05D001188 ORTHO05D001032 9.0e-08 60.8 99 39.4
PGR044G0229 Punica granatum HOM05D001188 ORTHO05D001032 1.2e-07 60.5 102 40.2
CANSAT80G0425 Cannabis sativa HOM05D001188 ORTHO05D001032 1.5e-07 60.1 85 40.0
CANSAT80G0467 Cannabis sativa HOM05D001188 ORTHO05D001032 1.5e-07 60.1 85 40.0
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 1.5e-07 60.1 94 38.3
Manes.01G011400 Manihot esculenta HOM05D001188 ORTHO05D001032 2.0e-07 59.7 105 40.0
Actinidia14893 Actinidia chinensis HOM05D001188 ORTHO05D001032 3.4e-07 58.9 112 33.9
AUR62002861 Chenopodium quinoa HOM05D001188 ORTHO05D001032 3.4e-07 58.9 113 35.4
C03p08790 Brassica napus HOM05D001188 ORTHO05D001032 5.8e-07 58.2 126 34.9
BolC3t13375H Brassica oleracea HOM05D001188 ORTHO05D001032 5.8e-07 58.2 126 34.9
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 5.8e-07 58.2 99 37.4
Dinv34823 Davidia involucrata HOM05D001188 ORTHO05D001032 5.8e-07 58.2 88 39.8
Sabra15G0073800 Salix brachista HOM05D001188 ORTHO05D001032 5.8e-07 58.2 120 35.0
CSS0033520 Camellia sinensis var. sinensis HOM05D001188 ORTHO05D001032 1.0e-06 57.4 102 38.2
MBI10_g16030_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D001032 1.3e-06 57.0 110 33.6
MD14G1226700 Malus domestica HOM05D001188 ORTHO05D001032 1.7e-06 56.6 121 33.9
Hund25061 Selenicereus undatus HOM05D001188 ORTHO05D001032 1.7e-06 56.6 114 38.6
Dinv31636 Davidia involucrata HOM05D001188 ORTHO05D001032 2.2e-06 56.2 143 29.4
Atru.chr9.860 Acer truncatum HOM05D001188 ORTHO05D001032 2.9e-06 55.8 89 38.2
Ciclev10022616m.g Citrus clementina HOM05D001188 ORTHO05D001032 2.9e-06 55.8 93 37.6
Prupe.3G157300 Prunus persica HOM05D001188 ORTHO05D001032 2.9e-06 55.8 97 35.1
ECA240G2122 Erigeron canadensis HOM05D001188 ORTHO05D001032 4.9e-06 55.1 109 36.7
Potri.012G056500 Populus trichocarpa HOM05D001188 ORTHO05D001032 4.9e-06 55.1 85 36.5
AT5G16110 Arabidopsis thaliana HOM05D001188 ORTHO05D001032 6.5e-06 54.7 90 34.4
A03p07560 Brassica napus HOM05D001188 ORTHO05D001032 6.5e-06 54.7 127 32.3
BraA03t10084Z Brassica rapa HOM05D001188 ORTHO05D001032 6.5e-06 54.7 127 32.3
Carub.0055s0003 Capsella rubella HOM05D001188 ORTHO05D001032 6.5e-06 54.7 90 34.4
Lsat_1_v5_gn_8_40640 Lactuca sativa HOM05D001188 ORTHO05D001032 6.5e-06 54.7 130 30.8
GSVIVG01008289001 Vitis vinifera HOM05D001188 ORTHO05D001032 6.5e-06 54.7 82 37.8
Aa31LG11G13500 Aethionema arabicum HOM05D001188 ORTHO05D001032 8.4e-06 54.3 103 33.0
AL6G26990 Arabidopsis lyrata HOM05D001188 ORTHO05D001032 8.4e-06 54.3 90 34.4
EL10Ac2g04580 Beta vulgaris HOM05D001188 ORTHO05D001032 8.4e-06 54.3 134 31.3
Carub.0006s1430 Capsella rubella HOM05D001188 ORTHO05D001032 8.4e-06 54.3 90 32.2


User provided reference genes

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