Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 1.0e-119 433.3 211 100.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 7.3e-97 357.5 294 66.3
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 2.1e-83 312.8 158 93.7
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 3.5e-83 312.0 294 57.5
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 5.1e-74 281.6 294 53.4
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.1e-73 280.4 294 54.4
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.5e-73 280.0 294 52.7
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 7.3e-73 277.7 294 51.7
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 1.6e-72 276.6 291 52.9
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 4.8e-72 275.0 294 52.4
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 4.8e-72 275.0 294 53.4
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 8.1e-72 274.2 294 53.1
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 8.1e-72 274.2 294 52.7
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 4.0e-71 271.9 293 53.2
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 5.3e-71 271.6 300 54.3
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.5e-70 270.0 294 52.4
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 9.9e-70 267.3 294 52.4
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 1.7e-69 266.5 291 52.6
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 2.2e-69 266.2 294 50.3
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 3.8e-69 265.4 267 54.7
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 2.4e-68 262.7 299 52.5
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 1.2e-67 260.4 288 52.1
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 1.6e-67 260.0 297 49.8
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 2.7e-67 259.2 295 49.5
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 7.9e-67 257.7 293 49.1
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 7.9e-67 257.7 267 53.9
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 1.7e-66 256.5 294 49.7
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 3.9e-66 255.4 308 49.4
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 6.6e-66 254.6 293 49.8
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.1e-65 253.8 293 51.2
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 4.3e-65 251.9 292 49.7
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 1.3e-64 250.4 293 50.5
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.3e-64 250.4 293 49.8
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 3.6e-64 248.8 285 49.8
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 4.8e-64 248.4 234 60.7
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 5.3e-63 245.0 289 48.8
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 5.3e-63 245.0 294 49.7
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.6e-62 242.7 288 50.3
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 4.5e-62 241.9 294 48.0
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 7.6e-62 241.1 295 47.5
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 9.9e-62 240.7 293 46.8
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.3e-61 240.4 294 48.0
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 1.7e-61 240.0 158 73.4
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.9e-61 239.2 279 48.4
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 3.8e-61 238.8 297 47.1
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 3.8e-61 238.8 292 47.6
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 4.9e-61 238.4 294 48.6
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 4.2e-60 235.3 294 48.6
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 9.3e-60 234.2 294 49.0
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.2e-59 233.8 158 70.3
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 1.6e-59 233.4 295 47.5
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 2.7e-59 232.6 157 74.5
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 4.6e-59 231.9 294 47.6
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 6.0e-59 231.5 157 70.7
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 1.0e-58 230.7 158 73.4
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 2.5e-57 226.1 291 49.5
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 4.3e-57 225.3 292 44.5
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 4.3e-57 225.3 292 44.5
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 5.6e-57 224.9 267 49.4
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 8.1e-56 221.1 288 49.3
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 8.1e-56 221.1 294 44.9
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 8.1e-56 221.1 158 68.4
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 1.1e-55 220.7 295 45.8
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 1.4e-55 220.3 296 46.3
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.4e-55 220.3 294 45.6
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 2.4e-55 219.5 293 47.4
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 3.1e-55 219.2 295 47.5
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 5.3e-55 218.4 295 46.8
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 5.3e-55 218.4 294 45.9
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 5.3e-55 218.4 294 46.3
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 1.5e-54 216.9 295 46.4
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.5e-54 216.9 295 46.4
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.5e-54 216.9 295 46.4
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.5e-54 216.9 294 44.2
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 1.5e-54 216.9 294 45.9
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 2.0e-54 216.5 292 44.9
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 3.4e-54 215.7 292 44.5
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 4.5e-54 215.3 293 47.4
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 4.5e-54 215.3 292 44.9
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 4.5e-54 215.3 292 44.9
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 5.8e-54 214.9 295 46.1
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 5.8e-54 214.9 294 43.9
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 7.6e-54 214.5 292 44.2
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 1.0e-53 214.2 294 45.6
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 1.3e-53 213.8 292 44.5
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 2.2e-53 213.0 294 44.9
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 2.2e-53 213.0 292 43.5
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 2.2e-53 213.0 292 43.5
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 3.8e-53 212.2 295 44.4
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 1.1e-52 210.7 256 48.0
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 2.5e-52 209.5 292 44.2
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 5.5e-52 208.4 293 45.4
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 2.7e-51 206.1 292 43.5
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 3.9e-50 202.2 157 66.9
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 1.1e-49 200.7 284 43.7
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.1e-49 200.7 284 43.7
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 1.1e-49 200.7 158 67.7
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 1.9e-49 199.9 284 43.3
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.9e-49 199.9 227 47.1
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 3.3e-49 199.1 293 43.7
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 6.2e-48 194.9 160 61.2
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 8.2e-48 194.5 288 46.9
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.4e-47 193.0 282 42.9
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 4.1e-47 192.2 218 50.5
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 5.3e-47 191.8 160 61.9
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.2e-45 186.4 157 59.2
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.2e-45 186.4 157 59.2
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 2.7e-43 179.5 160 55.6
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 3.9e-42 175.6 159 57.9
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 3.7e-40 169.1 157 58.6
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 4.5e-38 162.2 159 56.0
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 2.2e-29 133.3 73 80.8
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 3.0e-26 122.9 285 36.5
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 1.2e-22 110.9 164 39.0
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.8e-15 87.0 158 34.8
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 7.0e-15 85.1 159 34.0
Actinidia02701 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.0e-10 71.2 57 68.4
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-09 67.4 136 35.3
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 8.3e-08 61.6 106 34.0
CiPaw.14G136600 Carya illinoinensis HOM05D000764 ORTHO05D004953 2.0e-06 57.0 33 81.8


User provided reference genes

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