Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 0.0e+00 1308.1 683 100.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 3.2e-263 911.8 693 73.3
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.5e-183 646.4 692 56.4
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.5e-179 631.7 734 54.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 6.3e-150 535.4 703 49.4
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.0e-147 528.1 706 48.2
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.3e-147 527.7 698 48.9
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.0e-139 501.5 701 48.5
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.2e-137 494.6 711 46.6
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.6e-132 477.6 685 47.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 3.4e-127 459.9 692 44.5
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.1e-125 454.9 623 48.6
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 6.0e-124 449.1 559 52.1
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 4.0e-120 436.4 710 44.1
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 5.2e-120 436.0 709 44.3
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.3e-118 431.4 676 45.1
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-117 427.6 692 42.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 5.6e-114 416.0 752 41.1
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 6.4e-110 402.5 600 45.5
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 7.1e-109 399.1 693 41.0
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 9.2e-109 398.7 695 42.3
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.3e-107 394.0 720 41.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 3.0e-107 393.7 681 42.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 4.3e-106 389.8 551 50.1
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.1e-105 387.5 734 40.1
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.0e-103 380.9 437 54.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 8.4e-102 375.6 663 45.4
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 7.1e-101 372.5 699 39.3
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 4.6e-100 369.8 731 38.9
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 5.1e-99 366.3 613 41.8
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 8.7e-99 365.5 690 41.6
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.1e-97 360.9 733 37.8
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.4e-96 358.2 710 37.9
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.4e-93 348.2 689 37.4
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.4e-93 346.3 649 40.4
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.6e-92 344.7 679 39.8
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.1e-92 344.4 691 37.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 4.6e-92 343.2 733 38.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.0e-91 342.0 694 37.2
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.1e-91 339.7 774 36.3
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.1e-90 338.6 739 37.3
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 7.3e-90 335.9 683 39.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 3.6e-89 333.6 693 36.9
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 5.3e-88 329.7 630 39.4
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 9.0e-88 328.9 686 37.6
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.4e-87 327.0 669 36.0
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 9.3e-85 318.9 490 45.7
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 2.7e-84 317.4 703 37.1
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 5.1e-83 313.2 688 35.2
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.6e-81 308.1 699 37.5
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 7.6e-79 299.3 694 36.2
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 8.4e-78 295.8 700 35.7
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 9.6e-74 282.3 721 38.0
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.9e-70 270.0 263 62.7
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.6e-68 265.0 641 34.6
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.1e-66 258.8 692 34.4
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 6.3e-65 253.1 696 34.6
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 6.3e-65 253.1 645 35.3
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 6.9e-64 249.6 695 34.2
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.2e-63 248.8 694 33.3
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.5e-63 246.9 643 34.7
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.0e-62 245.7 636 32.9
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.5e-61 241.1 255 58.4
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.6e-60 238.4 408 40.2
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 6.1e-60 236.5 679 34.6
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.0e-59 235.7 704 33.8
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.5e-58 231.1 293 49.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 2.2e-57 228.0 683 31.6
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 6.3e-57 226.5 671 33.5
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.2e-55 222.2 662 33.2
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.2e-55 222.2 662 31.9
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 3.4e-55 220.7 691 33.9
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 5.9e-55 219.9 742 31.7
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.7e-54 218.4 655 33.9
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.9e-54 217.6 662 33.1
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.5e-54 216.5 689 32.9
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 9.4e-53 212.6 636 32.5
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 3.6e-52 210.7 696 31.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.0e-51 209.1 697 31.1
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 6.3e-49 199.9 696 30.3
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 3.1e-48 197.6 685 30.2
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.8e-46 190.7 678 31.4
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.1e-45 189.1 281 45.6
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.4e-45 188.7 685 30.8
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 3.6e-44 184.1 633 31.0
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.6e-42 177.9 675 30.7
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.7e-41 175.3 660 30.5
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 8.2e-41 172.9 669 30.2
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.2e-39 169.1 633 29.9
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.2e-39 169.1 640 29.2
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 4.5e-39 167.2 198 52.5
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 8.8e-35 152.9 610 28.2
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 2.4e-32 144.8 148 57.4
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.1e-28 131.7 667 27.7
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 4.2e-21 107.5 367 33.8
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.5e-18 99.0 668 25.9
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.7e-17 95.5 692 25.3
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.1e-16 91.3 679 25.6
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 1.3e-14 85.9 94 52.1
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 3.9e-14 84.3 700 24.3
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 2.8e-12 78.2 333 24.6
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 6.8e-11 73.6 678 23.9
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 1.3e-09 69.3 95 46.3
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.9e-09 68.2 675 22.1
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 4.9e-09 67.4 529 23.4
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-08 66.2 46 65.2
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 1.4e-08 65.9 700 22.0
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 2.4e-08 65.1 534 23.4
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 4.1e-08 64.3 161 33.5
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-07 62.4 663 23.2
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 2.7e-07 61.6 116 38.8
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 3.5e-07 61.2 689 22.8
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 3.5e-07 61.2 134 32.8
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.0e-06 59.7 664 23.6
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 3.9e-06 57.8 683 22.8
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 5.0e-06 57.4 108 38.9


User provided reference genes

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