Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 0.0e+00 1408.7 717 100.0
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.9e-267 924.9 607 80.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.1e-257 892.5 641 74.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 3.7e-249 865.1 649 71.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 3.7e-249 865.1 655 69.8
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.0e-247 859.4 652 70.4
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.9e-243 845.1 648 69.3
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 7.4e-242 840.9 651 68.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.0e-238 830.5 650 68.3
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.7e-238 829.7 650 67.8
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.4e-227 793.5 651 65.7
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.2e-225 786.2 655 63.5
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 6.3e-225 784.6 653 64.3
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.4e-224 782.7 654 64.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 5.3e-224 781.6 654 64.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.5e-223 780.0 653 64.5
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 3.4e-223 778.9 658 63.4
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 1.7e-222 776.5 652 64.0
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 3.6e-220 768.8 648 64.0
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 7.9e-220 767.7 648 61.7
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 8.8e-219 764.2 656 61.4
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 7.4e-218 761.1 655 62.7
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 9.7e-218 760.8 648 61.9
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 2.2e-217 759.6 657 62.7
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 1.1e-216 757.3 652 62.1
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 4.1e-216 755.4 648 61.9
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 9.1e-216 754.2 648 62.2
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 9.1e-216 754.2 648 60.8
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.5e-215 753.4 656 62.8
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 5.9e-215 751.5 659 62.8
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 7.7e-215 751.1 657 61.3
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.9e-214 749.2 656 62.3
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 6.5e-214 748.0 656 60.8
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.2e-213 745.7 656 62.3
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.7e-212 742.7 648 60.5
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 6.1e-212 741.5 648 62.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 6.1e-212 741.5 657 62.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.8e-211 740.0 653 61.3
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.1e-208 729.2 544 72.2
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 7.0e-208 728.0 646 58.7
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 5.0e-206 721.8 641 59.8
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 8.5e-206 721.1 652 60.6
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 4.2e-205 718.8 654 58.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.7e-202 708.4 669 57.1
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.2e-201 706.4 669 57.0
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.8e-201 706.1 607 62.4
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 9.1e-200 701.0 652 58.1
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.9e-197 693.3 648 59.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 2.7e-196 689.5 622 60.9
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.8e-195 686.8 652 56.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.8e-195 686.8 654 56.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 4.0e-195 685.6 653 57.3
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 8.8e-195 684.5 652 56.3
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.4e-194 682.2 658 56.7
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.7e-194 681.8 653 55.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 9.8e-194 681.0 658 56.5
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.1e-192 677.6 654 56.3
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 8.6e-190 667.9 663 54.8
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.5e-189 666.4 652 56.7
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 3.6e-188 662.5 657 57.2
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.7e-185 653.7 656 54.0
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.8e-185 652.9 659 54.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 7.0e-184 648.3 657 55.4
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.0e-183 646.7 654 56.7
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.5e-183 646.0 603 57.2
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.5e-181 640.6 662 53.5
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.5e-181 639.8 657 55.6
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 8.0e-180 634.8 576 58.2
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.4e-179 634.0 653 53.4
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.7e-177 627.1 629 56.9
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 8.3e-177 624.8 652 53.5
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.1e-176 624.4 656 52.3
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.9e-176 623.6 651 53.3
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.7e-175 619.8 655 52.7
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.0e-175 618.6 478 70.7
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.0e-174 617.8 652 52.8
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.9e-173 613.6 608 55.6
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 5.6e-173 612.1 664 52.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.1e-172 610.1 653 52.4
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 1.1e-171 607.8 657 52.2
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.3e-171 606.7 656 52.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 3.4e-170 602.8 640 52.8
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 5.8e-170 602.1 647 52.7
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 5.8e-170 602.1 651 52.1
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 4.9e-169 599.0 640 52.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 4.9e-169 599.0 648 52.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 6.4e-169 598.6 652 52.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.3e-166 590.9 633 52.6
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.1e-165 587.8 656 49.8
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 1.3e-161 574.3 649 49.6
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 3.9e-158 562.8 642 52.2
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.1e-157 561.2 661 51.7
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.1e-155 553.1 559 54.2
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.3e-150 537.7 657 48.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 9.6e-149 531.6 658 48.9
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 4.5e-138 496.1 646 48.6
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.3e-132 478.0 654 43.1
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.1e-119 434.1 654 41.0
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-109 401.7 481 55.5
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.0e-106 391.0 447 49.4
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 4.7e-103 379.8 249 77.1
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.2e-88 330.5 617 41.5
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 3.7e-84 317.0 479 39.5
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.0e-70 270.8 178 73.6
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.6e-58 231.9 711 28.1
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.0e-57 229.2 757 27.1
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 6.6e-57 226.5 381 36.0
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.1e-54 217.6 145 74.5
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.2e-45 189.1 587 31.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.4e-44 183.0 140 65.7
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.0e-38 164.1 122 68.0
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.3e-33 149.1 342 28.9
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 2.3e-33 148.3 323 30.7
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.5e-32 145.6 355 33.0
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.4e-19 102.4 108 45.4
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.5e-16 92.4 49 89.8
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.6e-15 89.0 49 87.8
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.1e-14 84.7 49 83.7
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.8e-12 77.8 48 77.1


User provided reference genes

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