Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 2.4e-142 508.8 259 100.0
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 5.4e-110 401.4 253 79.8
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.1e-109 399.4 250 80.4
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.1e-109 399.4 250 80.4
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 1.4e-105 386.7 249 77.1
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.2e-103 379.4 256 74.2
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 2.9e-103 379.0 259 75.3
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 6.4e-103 377.9 289 69.2
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 6.4e-103 377.9 256 74.6
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 8.3e-103 377.5 255 74.5
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.1e-102 377.1 247 76.1
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.1e-102 377.1 258 73.6
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 3.2e-102 375.6 239 76.6
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 7.8e-101 370.9 251 72.5
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 2.3e-100 369.4 259 73.4
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.5e-99 366.7 251 72.1
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 5.6e-99 364.8 247 75.3
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.2e-98 363.6 245 72.7
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 3.6e-98 362.1 251 70.5
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 4.7e-98 361.7 245 73.9
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 8.1e-98 360.9 250 73.2
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 2.4e-97 359.4 250 73.2
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 4.0e-97 358.6 257 68.9
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 8.9e-97 357.5 250 73.2
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.5e-96 356.7 251 70.1
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 1.5e-96 356.7 247 74.9
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.3e-95 353.6 229 75.1
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 1.7e-95 353.2 250 72.4
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.7e-95 353.2 248 71.4
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.9e-95 352.4 226 77.9
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 6.4e-95 351.3 241 72.6
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-94 349.7 248 71.0
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 9.2e-94 347.4 250 71.6
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 9.2e-94 347.4 248 70.6
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-93 347.1 248 70.2
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 2.1e-93 346.3 253 67.6
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 4.6e-93 345.1 256 68.8
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.3e-92 343.6 245 69.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 3.0e-92 342.4 248 69.0
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 3.9e-92 342.0 247 72.5
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.1e-92 341.7 248 70.2
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 6.6e-92 341.3 257 68.9
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 8.7e-92 340.9 246 70.3
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 1.1e-91 340.5 249 69.1
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.5e-91 340.1 256 67.2
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 4.3e-91 338.6 251 68.5
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.6e-90 335.5 253 68.0
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 4.7e-90 335.1 250 68.0
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 4.7e-90 335.1 251 67.3
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 8.1e-90 334.3 254 66.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.1e-89 334.0 251 69.3
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.8e-89 333.2 247 69.6
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 5.3e-89 331.6 239 72.0
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 6.9e-89 331.3 247 69.6
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 9.0e-89 330.9 222 74.8
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.5e-88 330.1 259 64.9
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.6e-88 329.3 213 77.9
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 4.4e-88 328.6 221 76.9
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 5.8e-88 328.2 256 65.2
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 3.8e-87 325.5 198 81.8
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 3.8e-87 325.5 258 65.1
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 6.4e-87 324.7 251 64.1
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 8.4e-87 324.3 284 61.3
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 8.4e-87 324.3 251 67.3
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 2.4e-86 322.8 255 66.3
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 3.2e-86 322.4 206 75.7
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 3.2e-86 322.4 203 76.8
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 4.2e-86 322.0 244 69.7
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.2e-85 320.5 257 65.4
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 1.2e-85 320.5 199 79.4
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 2.1e-85 319.7 247 66.8
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 3.5e-85 318.9 251 65.3
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 3.5e-85 318.9 251 66.1
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 4.6e-85 318.5 252 65.9
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 4.6e-85 318.5 249 69.5
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 6.0e-85 318.2 249 64.7
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 6.0e-85 318.2 249 65.9
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.3e-84 317.0 249 65.9
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.3e-84 317.0 258 64.7
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 3.0e-84 315.8 253 64.4
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 6.6e-84 314.7 197 77.7
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.5e-83 313.5 249 65.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.9e-83 313.2 254 64.6
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 3.3e-83 312.4 198 78.8
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.8e-82 309.3 197 76.6
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.8e-82 308.5 216 75.5
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 6.2e-82 308.1 262 64.5
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 6.2e-82 308.1 248 62.1
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 5.3e-81 305.1 186 79.6
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 3.4e-80 302.4 270 61.1
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 3.8e-79 298.9 223 70.0
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.1e-78 297.4 245 60.8
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.1e-78 297.4 195 73.3
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 2.4e-78 296.2 243 60.9
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 7.1e-78 294.7 253 62.5
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.9e-75 286.6 250 58.0
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.5e-75 286.2 273 57.5
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 3.3e-75 285.8 210 67.1
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 2.1e-74 283.1 255 60.0
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 3.2e-70 269.2 198 65.7
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 6.9e-65 251.5 325 50.2
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.7e-63 246.9 244 53.3
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 4.6e-61 238.8 263 51.7
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 4.8e-58 228.8 158 70.9
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.8e-57 226.9 153 74.5
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.8e-52 210.3 204 53.4
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.8e-50 203.0 240 47.9
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 3.7e-50 202.6 205 53.2
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 6.3e-50 201.8 133 73.7
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 3.8e-47 192.6 214 52.3
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 4.2e-46 189.1 107 86.9
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 7.2e-46 188.3 227 43.6
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 4.1e-41 172.6 129 70.5
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 5.3e-41 172.2 108 81.5
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 5.5e-38 162.2 118 68.6
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 6.7e-36 155.2 143 56.6
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.4e-35 152.5 212 47.2
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.1e-33 147.9 188 48.4
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.0e-28 129.8 108 63.0
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.5e-27 127.5 221 37.1
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.6e-24 117.5 213 35.2
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 2.9e-23 113.2 79 70.9
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 4.7e-21 105.9 69 72.5
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 8.0e-21 105.1 65 81.5
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-20 103.6 68 72.1
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.2e-16 91.3 244 34.4
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.8e-12 77.4 203 32.5
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 5.0e-07 59.3 91 38.5


User provided reference genes

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