Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 3.7e-227 791.2 398 100.0
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 5.5e-162 574.7 397 73.6
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 7.4e-159 564.3 388 75.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 9.0e-157 557.4 396 71.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 2.6e-156 555.8 397 70.8
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 4.5e-156 555.1 396 71.5
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.6e-153 545.4 391 70.8
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.0e-152 543.9 391 70.6
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.3e-152 542.7 396 68.4
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.1e-152 541.6 398 67.6
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 4.3e-151 538.5 391 69.8
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 9.7e-151 537.3 393 70.0
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.7e-150 536.6 384 69.0
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 6.9e-149 531.2 396 68.2
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.2e-148 530.4 390 68.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.0e-147 525.0 390 67.4
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 5.0e-147 525.0 391 67.0
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.9e-146 523.1 386 68.1
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.2e-146 521.9 390 67.2
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.2e-145 520.4 389 66.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.2e-145 520.4 385 67.8
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 3.0e-144 515.8 396 67.2
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 5.7e-143 511.5 395 66.8
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 7.4e-143 511.1 398 64.3
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.3e-142 510.4 398 63.8
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.7e-142 510.0 398 64.1
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.8e-142 509.2 390 65.4
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.8e-142 508.4 389 66.3
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.1e-141 507.3 391 63.9
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 5.3e-141 505.0 392 64.5
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.2e-140 503.8 395 63.8
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.5e-140 503.4 390 64.4
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.5e-140 503.4 390 65.6
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.5e-140 503.4 398 63.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.0e-140 503.1 385 65.7
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.0e-140 503.1 397 65.5
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.6e-140 502.7 392 64.5
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 4.5e-140 501.9 395 64.3
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 4.5e-140 501.9 395 64.3
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 4.5e-140 501.9 395 64.3
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.5e-140 501.9 411 62.0
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 5.9e-140 501.5 396 62.4
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 7.7e-140 501.1 390 64.1
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.0e-139 500.7 396 62.9
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-139 500.4 390 64.6
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.2e-139 499.6 390 65.6
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 2.2e-139 499.6 392 64.8
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.8e-139 498.8 395 65.1
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 6.5e-139 498.0 385 63.6
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 6.5e-139 498.0 391 63.4
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 8.5e-139 497.7 398 63.3
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 3.2e-138 495.7 385 64.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 9.4e-138 494.2 387 65.4
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 4.7e-137 491.9 392 62.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 8.0e-137 491.1 392 63.3
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.4e-136 490.3 359 70.2
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 6.7e-136 488.0 389 63.2
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 6.7e-136 488.0 385 63.4
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 8.8e-136 487.6 387 64.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.5e-135 486.9 389 63.8
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 4.4e-135 485.3 391 62.1
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 4.4e-135 485.3 386 63.7
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.2e-134 483.0 389 63.8
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 8.2e-134 481.1 354 69.8
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 8.2e-134 481.1 354 68.9
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 9.1e-133 477.6 447 56.4
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 9.1e-133 477.6 394 61.7
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 9.1e-133 477.6 359 67.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.6e-132 476.9 396 59.3
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 5.0e-131 471.9 387 62.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.2e-126 456.4 397 58.9
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.3e-123 447.2 281 77.9
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.3e-123 447.2 396 57.8
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.0e-121 438.0 357 61.3
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.0e-119 433.3 396 57.6
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 2.0e-119 433.3 389 55.8
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 2.6e-119 433.0 349 62.8
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 4.4e-119 432.2 394 57.6
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 7.5e-119 431.4 387 56.1
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.4e-117 427.2 381 55.1
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.1e-101 374.4 247 73.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 5.2e-96 355.5 386 51.8
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.3e-94 350.9 262 69.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 5.1e-91 339.0 380 49.2
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.2e-89 334.3 382 43.7
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.1e-88 331.3 375 47.2
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.9e-88 328.2 377 46.7
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.0e-79 300.4 368 44.0
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 8.1e-73 278.5 333 48.9
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 9.9e-71 271.6 243 60.1
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 2.0e-63 247.3 187 63.6
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.8e-62 243.0 521 31.7
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 7.9e-60 235.3 210 57.6
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.9e-42 177.6 131 64.9
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.9e-42 177.6 131 64.9
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 6.5e-38 162.5 203 46.3
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 6.5e-30 136.0 163 46.0
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.1e-28 129.4 297 33.3
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.0e-19 100.5 88 52.3
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 4.0e-19 100.1 88 46.6
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.6e-18 97.4 75 69.3
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.5e-18 95.9 89 47.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.4e-16 91.7 54 88.9
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 2.4e-08 64.3 84 42.9


User provided reference genes

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