Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36406 Davidia involucrata HOM05D003299 ORTHO05D003811 9.6e-95 350.1 174 100.0
Dinv31216 Davidia involucrata HOM05D003299 ORTHO05D003811 3.0e-40 169.1 133 69.2
Hma1.2p1_0438F.1_g153110 Hydrangea macrophylla HOM05D003299 ORTHO05D003811 8.3e-30 134.4 134 56.7
CSS0049751 Camellia sinensis var. sinensis HOM05D003299 ORTHO05D003811 3.1e-29 132.5 137 55.5
Rhsim03G0117200 Rhododendron simsii HOM05D003299 ORTHO05D003811 5.4e-29 131.7 135 54.1
Actinidia06742 Actinidia chinensis HOM05D003299 ORTHO05D003811 2.3e-27 126.3 132 56.1
vmacro07125 Vaccinium macrocarpon HOM05D003299 ORTHO05D003811 1.9e-26 123.2 132 53.0
Lsat_1_v5_gn_9_68280 Lactuca sativa HOM05D003299 ORTHO05D003811 1.6e-25 120.2 115 54.8
TAR623G0928 Trochodendron aralioides HOM05D003299 ORTHO05D003811 1.2e-23 114.0 130 50.0
GSVIVG01016235001 Vitis vinifera HOM05D003299 ORTHO05D003811 3.4e-23 112.5 148 43.9
Nitab4.5_0004325g0060 Nicotiana tabacum HOM05D003299 ORTHO05D003811 5.4e-21 105.1 155 42.6
Duzib114G0224 Durio zibethinus HOM05D003299 ORTHO05D003811 2.7e-20 102.8 153 42.5
Nitab4.5_0004385g0010 Nicotiana tabacum HOM05D003299 ORTHO05D003811 1.0e-19 100.9 153 41.8
Haze_16847 Corylus avellana HOM05D003299 ORTHO05D003811 1.7e-19 100.1 156 41.0
Cc02_g11050 Coffea canephora HOM05D003299 ORTHO05D003811 2.9e-19 99.4 129 48.8
Gorai.009G311900 Gossypium raimondii HOM05D003299 ORTHO05D003811 6.6e-19 98.2 108 48.1
Eucgr.J01067 Eucalyptus grandis HOM05D003299 ORTHO05D003811 1.1e-18 97.4 102 52.9
Gohir.A05G294600 Gossypium hirsutum HOM05D003299 ORTHO05D003811 1.1e-18 97.4 108 48.1
DCAR_019092 Daucus carota HOM05D003299 ORTHO05D003811 1.5e-18 97.1 106 52.8
CiPaw.01G270000 Carya illinoinensis HOM05D003299 ORTHO05D003811 1.9e-18 96.7 158 41.1
TWI63G0314 Tripterygium wilfordii HOM05D003299 ORTHO05D003811 3.3e-18 95.9 104 53.8
Gohir.D05G295200 Gossypium hirsutum HOM05D003299 ORTHO05D003811 5.6e-18 95.1 107 46.7
PGSC0003DMG400007425 Solanum tuberosum HOM05D003299 ORTHO05D003811 9.5e-18 94.4 100 53.0
MD01G1104800 Malus domestica HOM05D003299 ORTHO05D003811 1.2e-17 94.0 120 45.0
Nn2g13758 Nelumbo nucifera HOM05D003299 ORTHO05D003811 3.6e-17 92.4 100 53.0
Potri.008G036400 Populus trichocarpa HOM05D003299 ORTHO05D003811 3.6e-17 92.4 120 50.0
Sabra08G0024500 Salix brachista HOM05D003299 ORTHO05D003811 4.7e-17 92.0 128 43.8
Solyc11g008450.2 Solanum lycopersicum HOM05D003299 ORTHO05D003811 1.0e-16 90.9 160 40.0
Sopen11g004240 Solanum pennellii HOM05D003299 ORTHO05D003811 1.0e-16 90.9 160 40.0
Thecc.10G079700 Theobroma cacao HOM05D003299 ORTHO05D003811 1.0e-16 90.9 153 37.9
MSTRG.8135 Avicennia marina HOM05D003299 ORTHO05D003811 2.3e-16 89.7 97 51.5
CAN.G321.39 Capsicum annuum HOM05D003299 ORTHO05D003811 3.0e-16 89.4 92 52.2
Nn2g11556 Nelumbo nucifera HOM05D003299 ORTHO05D003811 6.8e-16 88.2 133 42.1
SGA_v2.0_scaffold51G18707 Striga asiatica HOM05D003299 ORTHO05D003811 6.8e-16 88.2 108 47.2
ECA232G0110 Erigeron canadensis HOM05D003299 ORTHO05D003811 1.5e-15 87.0 115 46.1
FAN06G1076 Fragaria x ananassa HOM05D003299 ORTHO05D003811 1.5e-15 87.0 118 40.7
Ciclev10032804m.g Citrus clementina HOM05D003299 ORTHO05D003811 2.0e-15 86.7 145 40.7
RcHm_v2.0_Chr1g0362831 Rosa chinensis HOM05D003299 ORTHO05D003811 3.4e-15 85.9 116 44.8
Peaxi162Scf00296g00715 Petunia axillaris HOM05D003299 ORTHO05D003811 4.4e-15 85.5 93 51.6
Migut.F01723 Erythranthe guttata HOM05D003299 ORTHO05D003811 5.8e-15 85.1 98 50.0
FAN06G4627 Fragaria x ananassa HOM05D003299 ORTHO05D003811 7.5e-15 84.7 150 36.7
QL08p054943 Quercus lobata HOM05D003299 ORTHO05D003811 9.8e-15 84.3 97 44.3
HanXRQChr09g0246861 Helianthus annuus HOM05D003299 ORTHO05D003811 1.1e-13 80.9 109 44.0
Sed0000333 Sechium edule HOM05D003299 ORTHO05D003811 1.1e-13 80.9 133 39.1
HPP92_020760 Vanilla planifolia HOM05D003299 ORTHO05D003811 1.4e-13 80.5 174 35.1
AL6G13880 Arabidopsis lyrata HOM05D003299 ORTHO05D003811 2.4e-13 79.7 147 34.0
A10p31900 Brassica napus HOM05D003299 ORTHO05D003811 2.4e-13 79.7 135 40.0
CsaV3_5G036090 Cucumis sativus L. HOM05D003299 ORTHO05D003811 2.4e-13 79.7 109 41.3
FAN01G0418 Fragaria x ananassa HOM05D003299 ORTHO05D003811 2.4e-13 79.7 115 40.9
MELO3C012410.2 Cucumis melo HOM05D003299 ORTHO05D003811 3.2e-13 79.3 107 41.1
Thhalv10014762m.g Eutrema salsugineum HOM05D003299 ORTHO05D003811 3.2e-13 79.3 112 42.0
ATR0680G138 Amborella trichopoda HOM05D003299 ORTHO05D003811 4.1e-13 79.0 133 39.8
THA.LOC104816424 Tarenaya hassleriana HOM05D003299 ORTHO05D003811 4.1e-13 79.0 108 42.6
BraA10t45234Z Brassica rapa HOM05D003299 ORTHO05D003811 7.0e-13 78.2 135 40.0
ClCG05G021170 Citrullus lanatus HOM05D003299 ORTHO05D003811 7.0e-13 78.2 109 40.4
BcaC06g32129 Brassica carinata HOM05D003299 ORTHO05D003811 9.2e-13 77.8 89 48.3
FAN10G4229 Fragaria x ananassa HOM05D003299 ORTHO05D003811 9.2e-13 77.8 115 40.9
AT5G04260 Arabidopsis thaliana HOM05D003299 ORTHO05D003811 1.2e-12 77.4 131 36.6
Carub.0006s0321 Capsella rubella HOM05D003299 ORTHO05D003811 2.7e-12 76.3 148 35.1
FAN03G3169 Fragaria x ananassa HOM05D003299 ORTHO05D003811 2.7e-12 76.3 150 35.3
PSO339G5755 Papaver somniferum HOM05D003299 ORTHO05D003811 4.6e-12 75.5 124 35.5
FAN10G1005 Fragaria x ananassa HOM05D003299 ORTHO05D003811 7.8e-12 74.7 150 34.7
PSO801G0679 Papaver somniferum HOM05D003299 ORTHO05D003811 1.3e-11 73.9 123 35.8
Sp6g38490 Schrenkiella parvula HOM05D003299 ORTHO05D003811 1.3e-11 73.9 108 40.7
CARHR209020 Cardamine hirsuta HOM05D003299 ORTHO05D003811 1.7e-11 73.6 108 42.6
Atru.chr12.828 Acer truncatum HOM05D003299 ORTHO05D003811 2.3e-11 73.2 160 35.6
Psat6g094000 Pisum sativum HOM05D003299 ORTHO05D003811 3.0e-11 72.8 93 46.2
BcaC06g32130 Brassica carinata HOM05D000968 ORTHO05D003096 5.0e-11 72.0 87 48.3
BolC9t60001H Brassica oleracea HOM05D003299 ORTHO05D003811 5.0e-11 72.0 137 35.0
C09p72610 Brassica napus HOM05D003299 ORTHO05D003811 8.6e-11 71.2 137 35.0
Aqoxy2G01795 Aquilegia oxysepala HOM05D003299 ORTHO05D003811 1.5e-10 70.5 86 44.2
Manes.10G049200 Manihot esculenta HOM05D003299 ORTHO05D003811 5.6e-10 68.6 109 41.3
Glyma.02G161200 Glycine max HOM05D003299 ORTHO05D003811 3.6e-09 65.9 92 42.4
TPR.G10648 Trifolium pratense HOM05D003299 ORTHO05D003811 4.7e-09 65.5 81 42.0
Lj6g0007833 Lotus japonicus HOM05D003299 ORTHO05D003811 8.0e-09 64.7 79 44.3
Phvul.007G239200 Phaseolus vulgaris HOM05D003299 ORTHO05D003811 1.4e-08 63.9 84 40.5
Cpa.g.sc53.111 Carica papaya HOM05D003299 ORTHO05D003811 2.3e-08 63.2 149 34.2
Os02g0819200 Oryza sativa ssp. japonica HOM05D003299 ORTHO05D003811 2.3e-08 63.2 88 40.9
Prupe.2G210100 Prunus persica HOM05D003299 ORTHO05D003811 3.1e-08 62.8 96 39.6
Potri.010G225701 Populus trichocarpa HOM05D003299 ORTHO05D003811 8.9e-08 61.2 115 40.9
Lalb_Chr21g0313761 Lupinus albus HOM05D003299 ORTHO05D003811 1.5e-07 60.5 81 39.5
AagrBONN_evm.TU.Sc2ySwM_344.3569 Anthoceros agrestis HOM05D003299 ORTHO05D003811 3.4e-07 59.3 89 37.1
arahy.Tifrunner.gnm1.ann1.A87VPW Arachis hypogaea HOM05D003299 ORTHO05D003811 4.4e-07 58.9 86 39.5
arahy.Tifrunner.gnm1.ann1.JYTW4X Arachis hypogaea HOM05D003299 ORTHO05D003811 4.4e-07 58.9 86 39.5
SMO296G0030 Selaginella moellendorffii HOM05D003299 ORTHO05D003811 5.8e-07 58.5 84 39.3
Medtr1g050322 Medicago truncatula HOM05D003299 ORTHO05D003811 1.7e-06 57.0 132 34.1
SEGI_17685 Sequoiadendron giganteum HOM05D003299 ORTHO05D003811 3.7e-06 55.8 82 36.6


User provided reference genes

Program Settings