Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 1.6e-100 369.4 181 100.0
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 1.2e-68 263.5 141 90.1
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 5.0e-62 241.5 139 81.3
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 3.2e-61 238.8 139 82.0
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 3.2e-61 238.8 140 83.6
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 3.2e-61 238.8 139 83.5
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 9.4e-61 237.3 139 79.9
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.6e-60 236.5 141 81.6
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 8.0e-60 234.2 139 79.9
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 2.6e-58 229.2 139 80.6
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 3.3e-58 228.8 143 78.3
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 3.3e-58 228.8 140 77.9
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 9.7e-58 227.3 141 76.6
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 1.3e-57 226.9 142 76.1
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 1.7e-57 226.5 142 81.0
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 2.2e-57 226.1 140 77.1
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 8.3e-57 224.2 142 77.5
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 8.3e-57 224.2 140 76.4
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.8e-56 223.0 140 78.6
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 1.8e-56 223.0 135 77.8
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.4e-56 222.6 141 74.5
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.4e-56 222.6 141 74.5
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 4.1e-56 221.9 142 78.2
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 9.1e-56 220.7 146 74.7
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 1.6e-55 219.9 146 71.9
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 3.5e-55 218.8 140 77.1
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 5.9e-55 218.0 144 71.5
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 7.7e-55 217.6 141 73.8
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 1.3e-54 216.9 141 73.0
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.3e-54 216.9 140 76.4
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 1.7e-54 216.5 140 75.7
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 3.8e-54 215.3 146 70.5
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 3.8e-54 215.3 143 72.0
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 5.0e-54 214.9 140 75.0
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 5.0e-54 214.9 141 72.3
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 6.5e-54 214.5 147 68.7
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 6.5e-54 214.5 136 75.0
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 8.5e-54 214.2 135 77.0
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 8.5e-54 214.2 144 71.5
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.5e-53 213.4 140 75.7
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.5e-53 213.4 139 74.8
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 1.5e-53 213.4 135 78.5
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 1.5e-53 213.4 141 71.6
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 2.5e-53 212.6 154 70.8
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 3.2e-53 212.2 154 69.5
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 3.2e-53 212.2 154 70.1
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 4.2e-53 211.8 138 72.5
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 4.2e-53 211.8 144 75.0
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 5.5e-53 211.5 145 70.3
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 5.5e-53 211.5 145 71.7
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 7.2e-53 211.1 147 70.1
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 7.2e-53 211.1 139 74.1
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 7.2e-53 211.1 137 75.9
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 9.4e-53 210.7 135 76.3
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 1.2e-52 210.3 148 69.6
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 1.2e-52 210.3 146 67.8
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.6e-52 209.9 138 71.7
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.7e-52 209.1 146 71.2
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 6.1e-52 208.0 139 73.4
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 8.0e-52 207.6 144 68.8
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 1.0e-51 207.2 142 71.8
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 1.4e-51 206.8 135 72.6
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 2.3e-51 206.1 135 74.1
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 2.3e-51 206.1 143 69.2
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 2.3e-51 206.1 141 68.1
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 4.0e-51 205.3 143 69.9
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 5.2e-51 204.9 142 68.3
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 5.2e-51 204.9 145 72.4
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 8.8e-51 204.1 143 69.2
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 8.8e-51 204.1 143 69.2
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 1.2e-50 203.8 143 68.5
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 1.2e-50 203.8 165 67.3
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 2.0e-50 203.0 144 71.5
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 2.6e-50 202.6 145 68.3
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 3.4e-50 202.2 143 67.8
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 5.7e-50 201.4 139 68.3
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 7.5e-50 201.1 136 70.6
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 1.7e-49 199.9 139 68.3
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 2.2e-49 199.5 145 68.3
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 2.8e-49 199.1 135 66.7
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 2.8e-49 199.1 141 67.4
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 3.7e-49 198.7 135 73.3
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 4.8e-49 198.4 142 70.4
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 8.3e-49 197.6 143 66.4
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 1.8e-48 196.4 140 69.3
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 1.8e-48 196.4 140 69.3
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 2.4e-48 196.1 141 68.8
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 5.4e-48 194.9 147 67.3
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 7.0e-48 194.5 142 69.0
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 9.1e-48 194.1 147 68.7
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 3.5e-47 192.2 241 47.3
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 7.7e-47 191.0 115 80.0
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 2.3e-46 189.5 139 68.3
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 2.9e-46 189.1 142 66.2
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 2.9e-46 189.1 138 65.2
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 5.0e-46 188.3 146 67.1
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 5.0e-46 188.3 118 75.4
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 6.6e-46 188.0 117 78.6
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 8.6e-46 187.6 169 55.6
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 3.3e-45 185.7 140 65.7
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 3.3e-45 185.7 140 64.3
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 1.6e-44 183.3 139 63.3
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 1.6e-44 183.3 138 65.9
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 1.6e-44 183.3 138 65.9
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 2.1e-44 183.0 116 75.0
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 2.1e-44 183.0 140 62.1
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 2.1e-44 183.0 139 64.0
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 4.7e-44 181.8 136 65.4
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 4.7e-44 181.8 139 62.6
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 4.7e-44 181.8 116 76.7
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 8.0e-44 181.0 139 61.2
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 8.0e-44 181.0 139 61.2
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 1.0e-43 180.6 134 63.4
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 3.0e-43 179.1 142 59.2
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 1.5e-42 176.8 156 59.6
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 2.6e-42 176.0 142 64.8
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 2.6e-42 176.0 142 60.6
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 4.4e-42 175.3 133 61.7
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 9.8e-42 174.1 144 63.9
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 1.3e-41 173.7 137 63.5
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 1.3e-41 173.7 139 60.4
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.8e-41 172.6 136 62.5
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 1.1e-40 170.6 144 63.2
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 1.2e-39 167.2 136 61.0
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 7.8e-39 164.5 136 59.6
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.0e-38 164.1 136 59.6
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 1.9e-37 159.8 137 55.5
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 4.7e-36 155.2 120 65.0
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.4e-35 153.7 136 51.5
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 3.1e-35 152.5 226 41.2
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 4.0e-35 152.1 117 66.7
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 4.0e-35 152.1 141 56.0
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 4.1e-32 142.1 84 81.0
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 2.5e-29 132.9 106 63.2
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 8.0e-28 127.9 70 84.3
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 1.1e-27 127.5 116 58.6
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 1.1e-24 117.5 111 55.0
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 2.1e-23 113.2 69 72.5
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 4.6e-23 112.1 70 72.9
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 1.6e-20 103.6 73 69.9
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 4.7e-20 102.1 70 68.6
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 6.2e-20 101.7 69 66.7
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 4.1e-16 89.0 57 75.4
MD03G1017500 Malus domestica HOM05D004698 ORTHO05D005699 5.1e-14 82.0 61 65.6
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 9.6e-13 77.8 105 36.2
Potri.006G191700 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.6e-12 77.0 82 48.8
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 1.2e-10 70.9 39 84.6
MD13G1112600 Malus domestica HOM05D000829 ORTHO05D000690 2.2e-09 66.6 48 66.7
Dinv29042 Davidia involucrata HOM05D004698 ORTHO05D182677 2.3e-06 56.6 50 64.0


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