Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34048 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-88 327.4 151 100.0
Dinv05293 Davidia involucrata HOM05D000007 ORTHO05D000039 8.0e-13 77.8 119 40.3
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.4e-12 77.0 103 38.8
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-11 73.9 93 44.1
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 7.5e-11 71.2 74 45.9
Hma1.2p1_0178F.1_g078420 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.5e-11 71.2 92 42.4
FAN23G0231 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-10 70.1 123 39.0
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-10 70.1 120 40.0
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 3.7e-10 68.9 129 39.5
FAN23G2749 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.7e-10 68.9 123 39.0
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 4.8e-10 68.6 119 41.2
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 6.3e-10 68.2 98 37.8
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 6.3e-10 68.2 147 34.0
Thecc.04G089700 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-09 67.4 135 35.6
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-09 67.4 117 36.8
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.8e-09 66.6 91 40.7
Potri.015G013500 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.4e-09 66.2 119 31.9
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.1e-09 65.9 119 36.1
QL04p029136 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-09 65.9 108 40.7
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.3e-09 65.1 120 35.0
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.0e-09 64.7 120 32.5
FvH4_1g10030 Fragaria vesca HOM05D000007 ORTHO05D000039 7.0e-09 64.7 122 34.4
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.0e-09 64.7 120 35.0
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 7.0e-09 64.7 120 35.0
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 7.0e-09 64.7 118 35.6
Thecc.10G168100 Theobroma cacao HOM05D000007 ORTHO05D000039 9.1e-09 64.3 121 36.4
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-08 63.9 120 32.5
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-08 63.9 135 34.1
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-08 63.9 120 35.0
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-08 63.5 131 35.9
PGSC0003DMG400007566 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-08 63.5 102 41.2
PGSC0003DMG400037648 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-08 63.5 102 41.2
TWI73G0529 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.0e-08 63.2 93 37.6
Sed0011783 Sechium edule HOM05D000007 ORTHO05D000039 2.7e-08 62.8 124 30.6
Thecc.10G168500 Theobroma cacao HOM05D000007 ORTHO05D000039 2.7e-08 62.8 141 32.6
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.5e-08 62.4 122 36.1
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.5e-08 62.4 117 35.0
Solyc07g044920.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.5e-08 62.4 102 39.2
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.5e-08 62.4 130 33.8
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.5e-08 62.0 122 36.1
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 4.5e-08 62.0 122 36.1
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 101 38.6
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 101 38.6
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 101 38.6
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 101 38.6
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 101 38.6
QL03p073760 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-08 62.0 123 38.2
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.9e-08 61.6 117 35.9
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.9e-08 61.6 117 35.9
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 7.7e-08 61.2 138 34.1
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.0e-07 60.8 98 38.8
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-07 60.8 119 39.5
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.3e-07 60.5 122 36.9
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-07 60.5 146 30.8
PGSC0003DMG400013643 Solanum tuberosum HOM05D000236 ORTHO05D020911 1.3e-07 60.5 92 38.0
Peaxi162Scf00299g00064 Petunia axillaris HOM05D020909 ORTHO05D020911 1.7e-07 60.1 112 38.4
PGR042G0166 Punica granatum HOM05D000007 ORTHO05D000039 1.7e-07 60.1 95 40.0
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-07 60.1 115 36.5
QL05p044215 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-07 60.1 115 36.5
QL05p044233 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-07 59.7 115 36.5
RcHm_v2.0_Chr2g0096811 Rosa chinensis HOM05D000007 ORTHO05D000039 2.9e-07 59.3 120 35.8
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.8e-07 58.9 121 37.2
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 3.8e-07 58.9 67 43.3
MD17G1230300 Malus domestica HOM05D000007 ORTHO05D000039 5.0e-07 58.5 118 36.4
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.5e-07 58.2 101 31.7
ClCG10G015170 Citrullus lanatus HOM05D000007 ORTHO05D000039 6.5e-07 58.2 122 28.7
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 8.5e-07 57.8 72 43.1
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 8.5e-07 57.8 122 35.2
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.1e-06 57.4 80 37.5
Lj1C663T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-06 57.4 96 35.4
vmacro07597 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.1e-06 57.4 138 31.9
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.5e-06 57.0 95 38.9
MELO3C009863.2 Cucumis melo HOM05D000007 ORTHO05D000039 1.5e-06 57.0 124 28.2
MELO3C030704.2 Cucumis melo HOM05D000007 ORTHO05D000039 1.5e-06 57.0 124 28.2
CsaV3_3G041390 Cucumis sativus L. HOM05D000007 ORTHO05D000039 1.5e-06 57.0 124 29.8
Gohir.D10G240608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.5e-06 57.0 86 39.5
Gohir.D10G241400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.5e-06 57.0 86 39.5
Gorai.011G276600 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.5e-06 57.0 86 39.5
Sed0015533 Sechium edule HOM05D000007 ORTHO05D000039 1.9e-06 56.6 124 29.8
Thecc.10G168400 Theobroma cacao HOM05D000007 ORTHO05D000039 1.9e-06 56.6 69 42.0
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 2.5e-06 56.2 73 41.1
SalBow1G7567 Salvia bowleyana HOM05D000007 ORTHO05D000039 2.5e-06 56.2 69 42.0
vmacro05999 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.5e-06 56.2 98 38.8
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.2e-06 55.8 122 35.2
Ciclev10027079m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.5e-06 55.1 93 35.5
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.5e-06 55.1 136 31.6
Haze_13258 Corylus avellana HOM05D000007 ORTHO05D000039 5.5e-06 55.1 70 40.0
MD17G1251200 Malus domestica HOM05D000007 ORTHO05D000039 9.4e-06 54.3 101 29.7
Sed0002351 Sechium edule HOM05D000007 ORTHO05D000039 9.4e-06 54.3 125 31.2


User provided reference genes

Program Settings