Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.4e-63 246.1 129 100.0
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 1.2e-41 173.3 131 67.9
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 1.0e-37 160.2 124 68.5
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.8e-35 151.4 122 62.3
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 5.5e-31 137.9 122 54.9
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 1.5e-28 129.8 105 63.8
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 2.6e-28 129.0 102 66.7
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 1.7e-27 126.3 125 55.2
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 1.7e-27 126.3 122 52.5
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 2.8e-27 125.6 126 54.8
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 1.1e-26 123.6 115 56.5
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.1e-26 123.6 125 53.6
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 1.8e-26 122.9 114 60.5
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 7.0e-26 120.9 126 53.2
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 7.0e-26 120.9 128 51.6
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 3.5e-25 118.6 126 51.6
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.7e-24 116.3 127 50.4
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 2.3e-24 115.9 124 46.8
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 2.9e-24 115.5 112 53.6
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 3.8e-24 115.2 124 50.8
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 6.6e-24 114.4 129 53.5
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.9e-23 112.8 127 48.8
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 9.5e-23 110.5 131 45.8
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 1.6e-22 109.8 115 53.0
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.1e-22 109.4 128 46.1
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.0e-21 107.1 114 51.8
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 1.8e-21 106.3 128 54.7
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 4.0e-21 105.1 114 51.8
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.0e-21 105.1 124 46.0
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 4.0e-21 105.1 115 51.3
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.0e-21 105.1 111 53.2
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 8.9e-21 104.0 113 48.7
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 8.9e-21 104.0 113 48.7
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.2e-20 103.6 124 45.2
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 1.2e-20 103.6 115 51.3
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 2.0e-20 102.8 114 47.4
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 2.6e-20 102.4 114 46.5
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 9.8e-20 100.5 120 45.8
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.3e-19 100.1 127 44.1
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 2.2e-19 99.4 116 50.9
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 2.9e-19 99.0 105 49.5
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 3.7e-19 98.6 133 48.9
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 3.7e-19 98.6 114 50.9
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 4.9e-19 98.2 103 51.5
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.1e-18 97.1 121 46.3
Rhsim08G0048000 Rhododendron simsii HOM05D007296 ORTHO05D009201 1.8e-18 96.3 114 52.6
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 1.8e-18 96.3 109 49.5
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 2.4e-18 95.9 131 45.8
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 2.4e-18 95.9 120 45.8
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 4.1e-18 95.1 106 52.8
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 5.4e-18 94.7 120 45.0
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.6e-17 93.2 109 48.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.6e-17 93.2 110 50.0
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 2.7e-17 92.4 114 48.2
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 5.9e-17 91.3 109 46.8
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 5.9e-17 91.3 108 48.1
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 5.9e-17 91.3 116 41.4
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 1.3e-16 90.1 113 47.8
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 1.7e-16 89.7 110 46.4
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 1.7e-16 89.7 124 50.0
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 2.3e-16 89.4 108 48.1
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 6.6e-16 87.8 110 45.5
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 6.6e-16 87.8 110 49.1
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 6.6e-16 87.8 104 44.2
Actinidia33329 Actinidia chinensis HOM05D007296 ORTHO05D009201 1.1e-15 87.0 82 53.7
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 1.1e-15 87.0 124 42.7
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 3.3e-15 85.5 108 48.1
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 5.6e-15 84.7 103 42.7
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 1.6e-14 83.2 120 44.2
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 4.7e-14 81.6 106 41.5
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 4.7e-14 81.6 103 45.6
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 1.1e-13 80.5 105 45.7
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 1.1e-13 80.5 124 41.1
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 1.8e-13 79.7 108 41.7
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 2.3e-13 79.3 127 37.0
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 4.0e-13 78.6 86 52.3
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 5.2e-13 78.2 116 41.4
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 5.2e-13 78.2 72 54.2
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 6.8e-13 77.8 127 37.8
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 6.8e-13 77.8 106 43.4
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 8.9e-13 77.4 137 40.1
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 8.9e-13 77.4 104 41.3
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 2.0e-12 76.3 120 45.0
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 2.0e-12 76.3 117 43.6
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.6e-12 75.9 118 40.7
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.6e-12 75.9 124 36.3
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 2.6e-12 75.9 106 41.5
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 4.4e-12 75.1 72 54.2
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 4.4e-12 75.1 72 54.2
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 5.8e-12 74.7 107 41.1
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 9.8e-12 73.9 123 42.3
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 1.7e-11 73.2 123 41.5
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 1.7e-11 73.2 122 37.7
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 3.7e-11 72.0 107 43.9
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 4.9e-11 71.6 98 46.9
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 4.9e-11 71.6 127 39.4
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.9e-11 71.6 107 40.2
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 1.1e-10 70.5 98 45.9
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 2.4e-10 69.3 109 43.1
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 2.4e-10 69.3 109 43.1
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 2.4e-10 69.3 80 50.0
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.4e-10 69.3 127 39.4
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.4e-10 69.3 127 37.8
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 3.2e-10 68.9 119 38.7
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.2e-10 68.9 106 38.7
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 1.2e-09 67.0 131 38.2
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 3.5e-09 65.5 51 60.8
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.5e-09 65.5 127 35.4
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 1.7e-08 63.2 116 38.8
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 2.3e-08 62.8 119 34.5
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 3.9e-08 62.0 96 41.7
Os01g0938400 Oryza sativa ssp. japonica HOM05D024678 ORTHO05D025976 1.1e-07 60.5 59 54.2
Atru.chr9.2613 Acer truncatum HOM05D007296 ORTHO05D009201 4.3e-07 58.5 66 48.5
Zm00001eb141720 Zea mays HOM05D024678 ORTHO05D025976 4.7e-06 55.1 53 50.9
Zm00001eb363300 Zea mays HOM05D024678 ORTHO05D025976 6.2e-06 54.7 52 51.9


User provided reference genes

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