Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-163 577.0 284 100.0
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-106 390.2 269 76.2
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-97 360.1 270 74.1
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 9.5e-92 340.9 271 68.3
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 5.4e-63 245.4 279 50.5
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-60 235.7 284 48.2
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.8e-48 196.1 244 44.3
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-47 193.4 269 42.4
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 7.1e-47 191.8 273 41.8
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-44 184.5 274 42.0
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-40 170.2 270 39.6
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-40 170.2 154 58.4
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 3.8e-40 169.5 225 44.0
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 7.1e-39 165.2 262 40.1
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 2.7e-38 163.3 267 38.6
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 3.3e-36 156.4 268 34.3
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-36 155.6 98 77.6
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 8.2e-35 151.8 263 37.6
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-34 150.6 90 83.3
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-33 147.9 138 54.3
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 4.5e-33 146.0 235 39.6
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.0e-29 133.3 224 37.5
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.9e-29 132.9 254 36.6
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-27 127.9 245 36.3
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 3.7e-27 126.3 211 38.9
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 5.3e-26 122.5 207 32.9
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 2.0e-25 120.6 249 32.9
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.2e-23 113.2 216 32.9
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 2.7e-22 110.2 172 39.0
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-22 108.6 140 41.4
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.3e-21 107.1 226 31.4
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 3.9e-21 106.3 169 34.9
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 6.7e-21 105.5 170 35.3
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.7e-21 105.5 216 31.5
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.7e-21 105.5 186 31.7
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 8.8e-21 105.1 148 39.9
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 9.7e-20 101.7 220 33.2
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 1.7e-19 100.9 147 38.8
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-19 100.1 231 32.0
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.3e-19 99.0 167 36.5
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.3e-19 99.0 165 37.6
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.2e-19 98.6 167 36.5
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.1e-18 98.2 186 30.1
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.1e-18 96.7 176 35.2
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.9e-18 95.5 166 34.9
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 6.9e-18 95.5 184 34.8
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-17 94.7 158 34.2
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-17 94.7 257 28.8
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 1.5e-17 94.4 223 31.4
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.5e-17 94.4 163 34.4
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.6e-17 93.6 167 35.9
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 4.5e-17 92.8 200 34.5
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.9e-17 92.4 165 36.4
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 7.7e-17 92.0 206 30.1
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.0e-16 89.4 174 33.3
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.4e-15 87.8 167 32.3
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.2e-14 84.7 132 37.9
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 1.6e-14 84.3 113 42.5
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 1.6e-14 84.3 206 28.2
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 9.7e-12 75.1 206 31.1
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.8e-11 73.6 206 30.6
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.1e-10 69.7 248 27.4
COL.COLO4_19864 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.3e-10 69.3 162 28.4
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 7.0e-10 68.9 109 34.9
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 9.1e-10 68.6 190 28.4
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.6e-09 67.0 167 30.5
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.6e-09 67.0 167 30.5
AUR62030492 Chenopodium quinoa HOM05D025186 ORTHO05D009800 3.5e-09 66.6 208 28.4
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 3.5e-09 66.6 224 29.0
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 7.7e-09 65.5 270 23.3
Rhsim04G0073200 Rhododendron simsii HOM05D059364 ORTHO05D009800 7.7e-09 65.5 187 27.8
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 1.7e-08 64.3 248 25.0
COL.COLO4_24270 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.9e-08 63.5 133 33.1
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.9e-08 63.5 169 32.0
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 2.9e-08 63.5 185 27.0
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 3.8e-08 63.2 192 27.6
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 6.5e-08 62.4 187 29.9
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 8.5e-08 62.0 192 27.6
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 8.5e-08 62.0 174 29.3
Dinv41767 Davidia involucrata HOM05D018862 ORTHO05D009800 1.5e-07 61.2 208 26.0
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 3.2e-07 60.1 184 26.1
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 5.5e-07 59.3 194 25.8
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 5.5e-07 59.3 171 28.7
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.5e-07 59.3 141 34.0
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 1.6e-06 57.8 221 24.0
COL.COLO4_02700 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.7e-06 57.0 71 42.3
COL.COLO4_17213 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.0e-06 55.5 85 32.9
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 8.0e-06 55.5 184 24.5


User provided reference genes

Program Settings