Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30190 Davidia involucrata HOM05D000762 ORTHO05D002234 2.3e-168 595.5 306 100.0
CSS0035558 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D002234 1.9e-45 187.2 293 45.4
TAR625G0233 Trochodendron aralioides HOM05D000762 ORTHO05D002234 8.5e-38 161.8 360 36.1
Hma1.2p1_0000F.1_g000930 Hydrangea macrophylla HOM05D000762 ORTHO05D002234 4.7e-36 156.0 308 38.6
QL12p031752 Quercus lobata HOM05D000762 ORTHO05D002234 1.1e-29 134.8 313 37.4
Actinidia14628 Actinidia chinensis HOM05D000145 ORTHO05D002234 2.7e-28 130.2 383 34.2
Haze_21590 Corylus avellana HOM05D000762 ORTHO05D002234 7.0e-24 115.5 289 36.7
Cfa013193 Carpinus fangiana HOM05D000762 ORTHO05D002234 1.5e-21 107.8 269 37.2
vmacro05201 Vaccinium macrocarpon HOM05D000762 ORTHO05D002234 1.8e-19 100.9 342 30.7
Lj7C716T9 Lonicera japonica HOM05D000762 ORTHO05D002234 3.0e-19 100.1 276 36.6
vmacro05205 Vaccinium macrocarpon HOM05D000762 ORTHO05D002234 5.2e-19 99.4 334 31.7
Prupe.1G472000 Prunus persica HOM05D000762 ORTHO05D002234 3.4e-18 96.7 261 35.6
GSVIVG01035771001 Vitis vinifera HOM05D000762 ORTHO05D002234 4.4e-18 96.3 248 34.7
Rhsim07G0150500 Rhododendron simsii HOM05D000762 ORTHO05D002234 1.7e-17 94.4 270 34.1
COL.COLO4_24000 Corchorus olitorius HOM05D000020 ORTHO05D002234 1.1e-16 91.7 296 30.4
Thecc.09G147800 Theobroma cacao HOM05D000762 ORTHO05D002234 5.5e-13 79.3 286 28.3
Cpa.g.sc91.33 Carica papaya HOM05D000762 ORTHO05D002234 9.5e-13 78.6 331 29.0
Duzib168G0774 Durio zibethinus HOM05D000762 ORTHO05D002234 1.6e-12 77.8 301 29.9
Atru.chr7.2360 Acer truncatum HOM05D000762 ORTHO05D002234 2.6e-10 70.5 151 39.1
Manes.16G118500 Manihot esculenta HOM05D000762 ORTHO05D002234 9.8e-10 68.6 284 29.6
Nitab4.5_0000508g0200 Nicotiana tabacum HOM05D000762 ORTHO05D002234 3.2e-08 63.5 268 30.6
MD15G1118800 Malus domestica HOM05D000762 ORTHO05D002234 5.4e-08 62.8 249 27.7
RcHm_v2.0_Chr6g0298781 Rosa chinensis HOM05D000762 ORTHO05D002234 1.6e-07 61.2 295 28.5
Lj5g0001208 Lotus japonicus HOM05D000762 ORTHO05D002234 2.0e-07 60.8 306 28.8
FAN15G0112 Fragaria x ananassa HOM05D000762 ORTHO05D002234 2.7e-07 60.5 318 25.2
FAN24G1958 Fragaria x ananassa HOM05D000762 ORTHO05D002234 2.7e-07 60.5 272 27.2
FAN27G3474 Fragaria x ananassa HOM05D000762 ORTHO05D002234 3.5e-07 60.1 318 25.2
Gohir.D08G102600 Gossypium hirsutum HOM05D000762 ORTHO05D002234 3.5e-07 60.1 169 32.5
FvH4_2g29760 Fragaria vesca HOM05D000762 ORTHO05D002234 4.6e-07 59.7 274 27.0
Nitab4.5_0001473g0010 Nicotiana tabacum HOM05D000762 ORTHO05D002234 4.6e-07 59.7 295 30.2
Sopen08g021350 Solanum pennellii HOM05D000762 ORTHO05D002234 1.7e-06 57.8 257 31.1
Peaxi162Scf00251g01218 Petunia axillaris HOM05D000762 ORTHO05D002234 2.9e-06 57.0 253 30.0
Ciclev10007580m.g Citrus clementina HOM05D000762 ORTHO05D002234 6.6e-06 55.8 285 27.0
Gorai.004G110700 Gossypium raimondii HOM05D000762 ORTHO05D002234 6.6e-06 55.8 172 32.6
Sc09g0008670 Simmondsia chinensis HOM05D000762 ORTHO05D002234 6.6e-06 55.8 189 30.2
Potri.018G032300 Populus trichocarpa HOM05D000762 ORTHO05D002234 8.6e-06 55.5 182 30.2


User provided reference genes

Program Settings