Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19149 Davidia involucrata HOM05D008810 ORTHO05D010971 5.1e-117 426.0 209 100.0
Dinv28839 Davidia involucrata HOM05D008810 ORTHO05D010971 5.1e-117 426.0 209 100.0
CSS0037385 Camellia sinensis var. sinensis HOM05D008810 ORTHO05D010971 6.9e-74 282.7 203 67.0
Actinidia23380 Actinidia chinensis HOM05D008810 ORTHO05D010971 7.4e-68 262.7 200 64.0
vmacro02795 Vaccinium macrocarpon HOM05D008810 ORTHO05D010971 1.3e-64 251.9 209 59.8
Rhsim13G0050100 Rhododendron simsii HOM05D008810 ORTHO05D010971 4.2e-63 246.9 195 62.1
Nn1g08193 Nelumbo nucifera HOM05D008810 ORTHO05D010971 8.2e-59 232.6 209 54.5
GSVIVG01005921001 Vitis vinifera HOM05D008810 ORTHO05D010971 9.1e-58 229.2 209 55.5
Prupe.8G196100 Prunus persica HOM05D008810 ORTHO05D010971 1.9e-55 221.5 210 51.4
Aqoxy2G03931 Aquilegia oxysepala HOM05D008810 ORTHO05D010971 2.6e-52 211.1 227 46.7
Ciclev10018778m.g Citrus clementina HOM05D008810 ORTHO05D010971 1.3e-51 208.8 210 50.0
Gorai.001G188700 Gossypium raimondii HOM05D008810 ORTHO05D010971 7.7e-49 199.5 208 49.0
Duzib138G0800 Durio zibethinus HOM05D008810 ORTHO05D010971 1.0e-48 199.1 207 48.8
Cpa.g.sc8.119 Carica papaya HOM05D008810 ORTHO05D010971 6.5e-48 196.4 211 47.9
Gohir.D07G165100 Gossypium hirsutum HOM05D008810 ORTHO05D010971 1.1e-47 195.7 208 48.1
MD10G1157300 Malus domestica HOM05D008810 ORTHO05D010971 1.1e-47 195.7 191 48.7
Gohir.A07G161900 Gossypium hirsutum HOM05D008810 ORTHO05D010971 9.4e-47 192.6 208 47.6
Thecc.01G216300 Theobroma cacao HOM05D008810 ORTHO05D010971 2.1e-46 191.4 200 50.0
Lj2P1121T65 Lonicera japonica HOM05D008810 ORTHO05D010971 1.0e-45 189.1 179 55.3
MSTRG.12764 Avicennia marina HOM05D008810 ORTHO05D010971 1.3e-40 172.2 170 47.6
ECA247G3188 Erigeron canadensis HOM05D008810 ORTHO05D010971 1.0e-37 162.5 168 47.6
HanXRQChr08g0232341 Helianthus annuus HOM05D008810 ORTHO05D010971 6.8e-37 159.8 168 44.6
Lsat_1_v5_gn_9_17361 Lactuca sativa HOM05D008810 ORTHO05D010971 2.6e-36 157.9 168 47.0
Migut.N00641 Erythranthe guttata HOM05D008810 ORTHO05D010971 5.4e-34 150.2 177 44.6
MBI11_g07406_MAGBIO Magnolia biondii HOM05D008810 ORTHO05D010971 1.2e-30 139.0 206 38.8
Sp3g06240 Schrenkiella parvula HOM05D008810 ORTHO05D010971 2.0e-28 131.7 177 36.2
AT3G07290 Arabidopsis thaliana HOM05D008810 ORTHO05D010971 8.3e-27 126.3 168 36.3
Carub.0003s0682 Capsella rubella HOM05D008810 ORTHO05D010971 3.2e-26 124.4 168 35.1
BNapus_Darmor_BZH_scaffold_109p00140 Brassica napus HOM05D008810 ORTHO05D010971 7.0e-26 123.2 157 36.9
Aa31LG5G17860 Aethionema arabicum HOM05D008810 ORTHO05D010971 1.2e-25 122.5 157 38.2
BraA01t04388Z Brassica rapa HOM05D008810 ORTHO05D010971 2.0e-25 121.7 157 35.7
BolC1t05560H Brassica oleracea HOM05D008810 ORTHO05D010971 3.5e-25 120.9 157 36.9
AL3G18590 Arabidopsis lyrata HOM05D008810 ORTHO05D010971 1.0e-24 119.4 163 36.2
THA.LOC104802656 Tarenaya hassleriana HOM05D008810 ORTHO05D010971 1.0e-24 119.4 178 35.4
CARHR081940 Cardamine hirsuta HOM05D008810 ORTHO05D010971 1.7e-24 118.6 178 33.7
BcaB04g21297 Brassica carinata HOM05D008810 ORTHO05D010971 1.5e-20 105.5 158 32.3
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.2e-12 79.3 183 26.8
Oeu033330.1 Olea europaea HOM05D008810 ORTHO05D010971 1.2e-12 79.3 76 44.7
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 2.0e-12 78.6 135 31.1
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 7.5e-12 76.6 167 26.9
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 7.5e-12 76.6 192 26.6
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 9.8e-12 76.3 150 27.3
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 9.8e-12 76.3 150 27.3
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 1.3e-11 75.9 189 27.0
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 1.3e-11 75.9 181 25.4
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.7e-11 75.5 189 26.5
FAN28G0230 Fragaria x ananassa HOM05D003210 ORTHO05D000001 2.9e-11 74.7 169 23.7
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.9e-11 74.7 172 27.9
EL10Ac6g15188 Beta vulgaris HOM05D003210 ORTHO05D000001 5.4e-10 70.5 110 31.8
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 1.2e-09 69.3 118 36.4
FvH4_1g06430 Fragaria vesca HOM05D003210 ORTHO05D000001 3.5e-09 67.8 169 21.9
FAN19G0968 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.5e-09 67.8 169 21.9
TAR628G1172 Trochodendron aralioides HOM05D006858 ORTHO05D008767 6.0e-09 67.0 142 26.1
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 7.8e-09 66.6 118 32.2
Os06g0152500 Oryza sativa ssp. japonica HOM05D006858 ORTHO05D008767 7.8e-09 66.6 123 31.7
Sp7g28540 Schrenkiella parvula HOM05D015591 ORTHO05D000001 1.0e-08 66.2 139 26.6
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 1.0e-08 66.2 163 25.8
FAN26G1074 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.3e-08 65.9 169 21.9
MD05G1166500 Malus domestica HOM05D007486 ORTHO05D003673 1.7e-08 65.5 119 31.9
MSTRG.9027 Avicennia marina HOM05D000162 ORTHO05D000090 3.0e-08 64.7 153 24.2
SEGI_29272 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 8.6e-08 63.2 100 29.0
Solyc01g068180.3 Solanum lycopersicum HOM05D005973 ORTHO05D007285 1.5e-07 62.4 102 32.4
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 1.5e-07 62.4 159 22.6
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 1.9e-07 62.0 88 27.3
Zm00001eb376700 Zea mays HOM05D006858 ORTHO05D008767 1.9e-07 62.0 130 30.0
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 3.3e-07 61.2 126 28.6
Sopen01g030120 Solanum pennellii HOM05D005973 ORTHO05D007285 3.3e-07 61.2 102 31.4
TWI31G0517 Tripterygium wilfordii HOM05D006858 ORTHO05D008767 3.3e-07 61.2 136 26.5
Aa31LG9G8720 Aethionema arabicum HOM05D005973 ORTHO05D007285 9.5e-07 59.7 167 26.3
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 9.5e-07 59.7 118 28.8
arahy.Tifrunner.gnm1.ann1.58SQTR Arachis hypogaea HOM05D004271 ORTHO05D006011 1.2e-06 59.3 183 26.2
Nitab4.5_0000316g0260 Nicotiana tabacum HOM05D005973 ORTHO05D007285 1.2e-06 59.3 102 31.4
Nitab4.5_0000923g0180 Nicotiana tabacum HOM05D007173 ORTHO05D009151 1.2e-06 59.3 114 28.9
Nitab4.5_0006992g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 1.2e-06 59.3 75 32.0
Lalb_Chr25g0282721 Lupinus albus HOM05D005973 ORTHO05D007285 1.6e-06 58.9 122 31.1
PSO339G1208 Papaver somniferum HOM05D005973 ORTHO05D007285 1.6e-06 58.9 126 30.2
Peaxi162Scf00087g00126 Petunia axillaris HOM05D005973 ORTHO05D007285 1.6e-06 58.9 102 30.4
SHI21874 Sapria himalayana HOM05D003210 ORTHO05D000001 2.1e-06 58.5 166 24.1
Solyc10g049570.3 Solanum lycopersicum HOM05D007173 ORTHO05D009151 2.1e-06 58.5 146 30.1
Atru.BG.296.p Acer truncatum HOM05D005973 ORTHO05D007285 2.8e-06 58.2 132 31.1
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 2.8e-06 58.2 114 29.8
Ciclev10005379m.g Citrus clementina HOM05D000424 ORTHO05D000355 2.8e-06 58.2 139 25.2
Oeu034452.1 Olea europaea HOM05D007145 ORTHO05D008952 2.8e-06 58.2 110 26.4
ATR0661G545 Amborella trichopoda HOM05D008810 ORTHO05D010971 3.6e-06 57.8 58 51.7
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 3.6e-06 57.8 127 24.4
Sopen10g021030 Solanum pennellii HOM05D007173 ORTHO05D009151 3.6e-06 57.8 114 28.9
COL.COLO4_08492 Corchorus olitorius HOM05D003210 ORTHO05D000001 4.7e-06 57.4 80 32.5
PGSC0003DMG401009781 Solanum tuberosum HOM05D007173 ORTHO05D009151 4.7e-06 57.4 114 28.9
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 6.2e-06 57.0 129 32.6
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 6.2e-06 57.0 114 29.8
DCAR_017698 Daucus carota HOM05D006740 ORTHO05D008571 6.2e-06 57.0 138 25.4
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.2e-06 57.0 141 27.0
Nitab4.5_0001775g0060 Nicotiana tabacum HOM05D005973 ORTHO05D007285 6.2e-06 57.0 102 30.4
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 8.1e-06 56.6 114 28.9
CAN.G410.36 Capsicum annuum HOM05D005973 ORTHO05D007285 8.1e-06 56.6 102 31.4
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 8.1e-06 56.6 130 28.5
Nitab4.5_0010304g0010 Nicotiana tabacum HOM05D006400 ORTHO05D008039 8.1e-06 56.6 152 28.3
SalBow3G0952 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.1e-06 56.6 146 26.7
SEGI_00392 Sequoiadendron giganteum HOM05D007208 ORTHO05D009090 8.1e-06 56.6 130 30.0
SGA_v2.0_scaffold77G25274 Striga asiatica HOM05D008810 ORTHO05D010971 8.1e-06 56.6 32 71.9
TPR.G8553 Trifolium pratense HOM05D007157 ORTHO05D009045 8.1e-06 56.6 182 25.3


User provided reference genes

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