Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26826 Davidia involucrata HOM05D003234 ORTHO05D003635 1.2e-39 166.0 82 100.0
Actinidia12120 Actinidia chinensis HOM05D003234 ORTHO05D003635 2.0e-18 95.5 53 84.9
Migut.H00998 Erythranthe guttata HOM05D003234 ORTHO05D003635 1.0e-17 93.2 56 82.1
CAN.G358.101 Capsicum annuum HOM05D003234 ORTHO05D003635 2.2e-17 92.0 53 83.0
CSS0031108 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 2.9e-17 91.7 53 83.0
Actinidia36555 Actinidia chinensis HOM05D003234 ORTHO05D003635 3.8e-17 91.3 53 81.1
Sopen02g030060 Solanum pennellii HOM05D003234 ORTHO05D003635 4.9e-17 90.9 53 83.0
Manes.01G134700 Manihot esculenta HOM05D003234 ORTHO05D003635 8.4e-17 90.1 53 81.1
Cc07_g09430 Coffea canephora HOM05D003234 ORTHO05D003635 3.2e-16 88.2 53 81.1
Hma1.2p1_0717F.1_g208130 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 4.2e-16 87.8 53 81.1
TPR.G34985 Trifolium pratense HOM05D003234 ORTHO05D003635 4.2e-16 87.8 54 79.6
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 7.1e-16 87.0 53 79.2
Atru.chr3.563 Acer truncatum HOM05D003234 ORTHO05D003635 1.2e-15 86.3 53 79.2
CiPaw.02G016600 Carya illinoinensis HOM05D003234 ORTHO05D003635 1.6e-15 85.9 53 75.5
Ciclev10026821m.g Citrus clementina HOM05D003234 ORTHO05D003635 1.6e-15 85.9 53 79.2
CDE02G3043 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 2.1e-15 85.5 74 59.5
Thecc.01G037000 Theobroma cacao HOM05D003234 ORTHO05D003635 2.7e-15 85.1 53 81.1
Psat4g092120 Pisum sativum HOM05D003234 ORTHO05D003635 4.6e-15 84.3 53 79.2
MSTRG.23532 Avicennia marina HOM05D003234 ORTHO05D003635 6.0e-15 84.0 53 75.5
Lj4g0023984 Lotus japonicus HOM05D003234 ORTHO05D003635 7.9e-15 83.6 53 79.2
GSVIVG01018978001 Vitis vinifera HOM05D003234 ORTHO05D003635 7.9e-15 83.6 53 81.1
Gohir.D12G065100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 8.7e-14 80.1 53 71.7
Gorai.008G068300 Gossypium raimondii HOM05D003234 ORTHO05D003635 8.7e-14 80.1 53 71.7
HanXRQChr15g0482261 Helianthus annuus HOM05D003234 ORTHO05D003635 2.5e-13 78.6 53 77.4
Eucgr.I02454 Eucalyptus grandis HOM05D003234 ORTHO05D003635 7.4e-13 77.0 53 67.9
Gohir.D10G092900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.1e-12 75.5 53 75.5
Gorai.011G102100 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.1e-12 75.5 53 75.5
SGA_v2.0_scaffold276G46636 Striga asiatica HOM05D003234 ORTHO05D003635 2.1e-12 75.5 72 58.3
Lalb_Chr09g0322471 Lupinus albus HOM05D003234 ORTHO05D003635 6.2e-12 73.9 53 71.7
Gohir.A10G095000 Gossypium hirsutum HOM05D003234 ORTHO05D003635 8.2e-12 73.6 53 73.6
ECA246G3301 Erigeron canadensis HOM05D003234 ORTHO05D003635 3.1e-11 71.6 54 70.4
Lsat_1_v5_gn_3_77600 Lactuca sativa HOM05D003234 ORTHO05D003635 3.1e-11 71.6 53 67.9
QL06p045796 Quercus lobata HOM05D003234 ORTHO05D003635 5.3e-11 70.9 36 88.9
ATR0733G120 Amborella trichopoda HOM05D003234 ORTHO05D003635 1.5e-10 69.3 53 66.0
Glyma.01G175400 Glycine max HOM05D003234 ORTHO05D003635 2.0e-10 68.9 53 69.8
Aqoxy5G01648 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 4.5e-10 67.8 53 69.8
CDE04G0975 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 4.5e-10 67.8 53 66.0
Glyma.11G067600 Glycine max HOM05D003234 ORTHO05D003635 1.0e-09 66.6 53 67.9
Gohir.A12G065000 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.3e-09 66.2 37 78.4
CANSAT01G1184 Cannabis sativa HOM05D003234 ORTHO05D003635 1.4e-08 62.8 53 64.2
arahy.Tifrunner.gnm1.ann1.F5AS58 Arachis hypogaea HOM05D003234 ORTHO05D003635 2.5e-08 62.0 53 64.2
arahy.Tifrunner.gnm1.ann1.WI3JHU Arachis hypogaea HOM05D003234 ORTHO05D003635 2.5e-08 62.0 53 64.2
Nn1g05018 Nelumbo nucifera HOM05D003234 ORTHO05D003635 2.5e-08 62.0 53 64.2
Phvul.002G029601 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 5.5e-08 60.8 53 60.4
Zm00001eb009770 Zea mays HOM05D003234 ORTHO05D003635 9.3e-08 60.1 54 59.3
Manes.02G093000 Manihot esculenta HOM05D003234 ORTHO05D003635 3.5e-07 58.2 36 72.2
Aqoxy6G01093 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 6.1e-07 57.4 50 64.0
Dinv39975 Davidia involucrata HOM05D003234 ORTHO05D003635 6.1e-07 57.4 53 66.0
Migut.L00515 Erythranthe guttata HOM05D003234 ORTHO05D003635 7.9e-07 57.0 50 54.0
SEGI_02230 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 8.7e-06 53.5 53 56.6
SEGI_11040 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 8.7e-06 53.5 53 56.6


User provided reference genes

Program Settings