Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26373 Davidia involucrata HOM05D005814 ORTHO05D006821 3.4e-58 228.0 109 100.0
Dinv26379 Davidia involucrata HOM05D005814 ORTHO05D006821 3.4e-58 228.0 109 100.0
Hma1.2p1_0234F.1_g098410 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 1.8e-51 205.7 107 88.8
Actinidia22431 Actinidia chinensis HOM05D005814 ORTHO05D006821 9.1e-51 203.4 109 87.2
CSS0022543 Camellia sinensis var. sinensis HOM05D005814 ORTHO05D006821 3.8e-49 198.0 106 86.8
Hma1.2p1_1845F.1_g305150 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 2.7e-47 191.8 107 86.0
GSVIVG01011625001 Vitis vinifera HOM05D005814 ORTHO05D006821 4.7e-47 191.0 107 84.1
Lj6A734T81 Lonicera japonica HOM05D005814 ORTHO05D006821 8.0e-47 190.3 109 83.5
Aqoxy3G04061 Aquilegia oxysepala HOM05D005814 ORTHO05D006821 3.7e-44 181.4 107 79.4
SalBow2G2494 Salvia bowleyana HOM05D005814 ORTHO05D006821 6.3e-44 180.6 107 76.6
Cc11_g06580 Coffea canephora HOM05D005814 ORTHO05D006821 3.1e-43 178.3 107 78.5
TWI74G1321 Tripterygium wilfordii HOM05D005814 ORTHO05D006821 4.5e-42 174.5 109 76.1
Cpa.g.sc2.165 Carica papaya HOM05D005814 ORTHO05D006821 1.0e-41 173.3 107 73.8
unitig_27.g25164 Utricularia gibba HOM05D005814 ORTHO05D006821 1.3e-41 172.9 107 77.6
Oeu006299.1 Olea europaea HOM05D005814 ORTHO05D006821 2.2e-41 172.2 107 75.7
Sopen04g003220 Solanum pennellii HOM05D005814 ORTHO05D006821 2.2e-41 172.2 107 77.6
PSO782G2706 Papaver somniferum HOM05D005814 ORTHO05D006821 3.8e-41 171.4 106 75.5
Atru.chr11.819 Acer truncatum HOM05D005814 ORTHO05D006821 1.1e-40 169.9 107 74.8
Migut.E00496 Erythranthe guttata HOM05D005814 ORTHO05D006821 1.9e-40 169.1 98 79.6
Ciclev10017889m.g Citrus clementina HOM05D005814 ORTHO05D006821 2.5e-40 168.7 107 73.8
DCAR_023563 Daucus carota HOM05D005814 ORTHO05D006821 7.2e-40 167.2 101 77.2
PSO782G1915 Papaver somniferum HOM05D005814 ORTHO05D006821 9.4e-40 166.8 107 69.2
Cfa015048 Carpinus fangiana HOM05D005814 ORTHO05D006821 6.1e-39 164.1 107 72.0
TAR629G0065 Trochodendron aralioides HOM05D005814 ORTHO05D006821 1.8e-38 162.5 98 78.6
Gohir.A12G154700 Gossypium hirsutum HOM05D005814 ORTHO05D006821 5.2e-38 161.0 107 69.2
CAN.G74.21 Capsicum annuum HOM05D005814 ORTHO05D006821 7.5e-37 157.1 98 77.6
ECA234G1246 Erigeron canadensis HOM05D005814 ORTHO05D006821 1.3e-36 156.4 109 67.9
CiPaw.06G055200 Carya illinoinensis HOM05D005814 ORTHO05D006821 3.7e-36 154.8 107 67.3
Prupe.1G335600 Prunus persica HOM05D005814 ORTHO05D006821 3.7e-36 154.8 107 68.2
Solyc04g008070.3 Solanum lycopersicum HOM05D005814 ORTHO05D006821 6.3e-36 154.1 100 75.0
PGSC0003DMG400029513 Solanum tuberosum HOM05D005814 ORTHO05D006821 1.1e-35 153.3 98 75.5
SGA_v2.0_scaffold23G10169 Striga asiatica HOM05D005814 ORTHO05D006821 1.8e-35 152.5 107 68.2
QL03p038226 Quercus lobata HOM05D005814 ORTHO05D006821 3.1e-35 151.8 107 68.2
BcaC07g41541 Brassica carinata HOM05D005814 ORTHO05D006821 5.3e-35 151.0 105 63.8
Thhalv10009486m.g Eutrema salsugineum HOM05D005814 ORTHO05D006821 5.3e-35 151.0 105 63.8
Manes.17G085800 Manihot esculenta HOM05D005814 ORTHO05D006821 5.3e-35 151.0 107 65.4
C08p45460 Brassica napus HOM05D005814 ORTHO05D006821 7.0e-35 150.6 105 62.9
CsaV3_5G014510 Cucumis sativus L. HOM05D005814 ORTHO05D006821 7.0e-35 150.6 107 65.4
Os03g0225200 Oryza sativa ssp. japonica HOM05D005814 ORTHO05D006821 7.0e-35 150.6 106 64.2
Sed0028047 Sechium edule HOM05D005814 ORTHO05D006821 7.0e-35 150.6 107 64.5
Phvul.003G016100 Phaseolus vulgaris HOM05D005814 ORTHO05D006821 9.1e-35 150.2 107 66.4
BcaB03g13082 Brassica carinata HOM05D005814 ORTHO05D006821 1.2e-34 149.8 104 63.5
BcaB02g06546 Brassica carinata HOM05D005814 ORTHO05D006821 1.6e-34 149.4 105 63.8
Peaxi162Scf00337g00625 Petunia axillaris HOM05D005814 ORTHO05D006821 1.6e-34 149.4 100 74.0
Sed0025695 Sechium edule HOM05D005814 ORTHO05D006821 2.7e-34 148.7 107 64.5
A09p61820 Brassica napus HOM05D005814 ORTHO05D006821 3.5e-34 148.3 105 61.9
Potri.010G103800 Populus trichocarpa HOM05D005814 ORTHO05D006821 3.5e-34 148.3 107 66.4
THA.LOC104805940 Tarenaya hassleriana HOM05D005814 ORTHO05D006821 3.5e-34 148.3 104 65.4
AL1G26770 Arabidopsis lyrata HOM05D005814 ORTHO05D006821 4.5e-34 147.9 104 62.5
Carub.0001s1454 Capsella rubella HOM05D005814 ORTHO05D006821 4.5e-34 147.9 104 62.5
Sp1g13190 Schrenkiella parvula HOM05D005814 ORTHO05D006821 7.7e-34 147.1 104 61.5
Gohir.D12G157900 Gossypium hirsutum HOM05D005814 ORTHO05D006821 1.7e-33 146.0 98 69.4
Gorai.008G170700 Gossypium raimondii HOM05D005814 ORTHO05D006821 1.7e-33 146.0 98 69.4
FAN07G0145 Fragaria x ananassa HOM05D005814 ORTHO05D006821 2.9e-33 145.2 109 67.0
Lsat_1_v5_gn_4_23401 Lactuca sativa HOM05D005814 ORTHO05D006821 2.9e-33 145.2 98 68.4
Sc16g0008510 Simmondsia chinensis HOM05D005814 ORTHO05D006821 2.9e-33 145.2 98 70.4
AT1G14750 Arabidopsis thaliana HOM05D005814 ORTHO05D006821 3.8e-33 144.8 104 61.5
FvH4_4g33270 Fragaria vesca HOM05D005814 ORTHO05D006821 3.8e-33 144.8 109 67.0
FAN12G4059 Fragaria x ananassa HOM05D005814 ORTHO05D006821 3.8e-33 144.8 109 67.0
PGR004G2344 Punica granatum HOM05D005814 ORTHO05D006821 5.0e-33 144.4 109 62.4
HPP92_002293 Vanilla planifolia HOM05D005814 ORTHO05D006821 8.5e-33 143.7 106 58.5
Aa31LG1G340 Aethionema arabicum HOM05D005814 ORTHO05D006821 1.1e-32 143.3 104 63.5
CARHR015280 Cardamine hirsuta HOM05D005814 ORTHO05D006821 1.1e-32 143.3 105 60.0
FAN17G1112 Fragaria x ananassa HOM05D005814 ORTHO05D006821 2.5e-32 142.1 109 65.1
BcaC07g38760 Brassica carinata HOM05D005814 ORTHO05D006821 3.2e-32 141.7 104 59.6
Hma1.2p1_2790F.1_g328600 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 5.5e-32 141.0 83 79.5
Aa31LG2G8110 Aethionema arabicum HOM05D005814 ORTHO05D006821 7.2e-32 140.6 104 62.5
Psat6g051160 Pisum sativum HOM05D005814 ORTHO05D006821 7.2e-32 140.6 107 62.6
Zm00001eb009260 Zea mays HOM05D005814 ORTHO05D006821 2.1e-31 139.0 107 58.9
Lj2g0010004 Lotus japonicus HOM05D005814 ORTHO05D006821 2.7e-31 138.7 109 63.3
RcHm_v2.0_Chr4g0442421 Rosa chinensis HOM05D005814 ORTHO05D006821 2.7e-31 138.7 101 70.3
BolC8t52099H Brassica oleracea HOM05D005814 ORTHO05D006821 3.6e-31 138.3 98 62.2
C05p12700 Brassica napus HOM05D005814 ORTHO05D006821 6.1e-31 137.5 98 62.2
BolC5t30013H Brassica oleracea HOM05D005814 ORTHO05D006821 6.1e-31 137.5 98 62.2
Nn4g24463 Nelumbo nucifera HOM05D005814 ORTHO05D006821 8.0e-31 137.1 87 73.6
Haze_10846 Corylus avellana HOM05D005814 ORTHO05D006821 1.4e-30 136.3 100 68.0
Glyma.07G172600 Glycine max HOM05D005814 ORTHO05D006821 1.4e-30 136.3 106 62.3
TPR.G6435 Trifolium pratense HOM05D005814 ORTHO05D006821 1.8e-30 136.0 107 61.7
A06p10800 Brassica napus HOM05D005814 ORTHO05D006821 4.0e-30 134.8 98 61.2
BraA06t24258Z Brassica rapa HOM05D005814 ORTHO05D006821 4.0e-30 134.8 98 61.2
Lalb_Chr10g0095581 Lupinus albus HOM05D005814 ORTHO05D006821 6.8e-30 134.0 98 65.3
BraA09t41550Z Brassica rapa HOM05D005814 ORTHO05D006821 8.8e-30 133.7 98 60.2
C08p16910 Brassica napus HOM05D005814 ORTHO05D006821 3.4e-29 131.7 98 59.2
BolC8t49318H Brassica oleracea HOM05D005814 ORTHO05D006821 3.4e-29 131.7 98 59.2
A08p31820 Brassica napus HOM05D005814 ORTHO05D006821 1.7e-28 129.4 98 58.2
BraA08t35104Z Brassica rapa HOM05D005814 ORTHO05D006821 1.7e-28 129.4 98 58.2
FAN22G0411 Fragaria x ananassa HOM05D005814 ORTHO05D006821 8.3e-28 127.1 100 66.0
Ah.04g160370 Amaranthus hybridus HOM05D005814 ORTHO05D006821 1.1e-27 126.7 109 56.0
Nitab4.5_0003884g0090 Nicotiana tabacum HOM05D005814 ORTHO05D006821 2.4e-27 125.6 88 69.3
SHI04346 Sapria himalayana HOM05D005814 ORTHO05D006821 2.4e-27 125.6 124 54.0
MD13G1018000 Malus domestica HOM05D005814 ORTHO05D006821 1.2e-26 123.2 87 70.1
Duzib251G0248 Durio zibethinus HOM05D005814 ORTHO05D006821 3.5e-26 121.7 83 69.9
Medtr1g032850 Medicago truncatula HOM05D005814 ORTHO05D006821 3.5e-26 121.7 98 61.2
Nitab4.5_0012105g0040 Nicotiana tabacum HOM05D005814 ORTHO05D006821 5.9e-26 120.9 98 66.3
Eucgr.B02694 Eucalyptus grandis HOM05D005814 ORTHO05D006821 1.7e-25 119.4 83 72.3
HanXRQChr17g0566001 Helianthus annuus HOM05D005814 ORTHO05D006821 2.9e-25 118.6 81 69.1
MELO3C016674.2 Cucumis melo HOM05D005814 ORTHO05D006821 5.5e-24 114.4 107 55.1
Ca_13001_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 7.2e-24 114.0 82 67.1
Ca_13003_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 7.2e-24 114.0 82 67.1
Nitab4.5_0007364g0010 Nicotiana tabacum HOM05D005814 ORTHO05D006821 1.6e-23 112.8 77 74.0
ClCG07G005440 Citrullus lanatus HOM05D005814 ORTHO05D006821 4.7e-23 111.3 85 63.5
VMungo1215G3061 Vigna mungo HOM05D005814 ORTHO05D006821 1.0e-22 110.2 76 69.7
unitig_29.g31882 Utricularia gibba HOM05D005814 ORTHO05D006821 1.8e-22 109.4 75 73.3
Zm00001eb399650 Zea mays HOM05D005814 ORTHO05D006821 1.8e-22 109.4 87 56.3
Glyma.02G086500 Glycine max HOM05D005814 ORTHO05D006821 1.3e-20 103.2 83 61.4
EL10Ac4g09401 Beta vulgaris HOM05D005814 ORTHO05D006821 3.7e-20 101.7 84 61.9
Hma1.2p1_0279F.1_g112070 Hydrangea macrophylla HOM05D005814 ORTHO05D008065 3.7e-20 101.7 62 79.0
Hma1.2p1_1786F.1_g302390 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 1.8e-19 99.4 50 90.0
ATR0021G040 Amborella trichopoda HOM05D005814 ORTHO05D006821 5.4e-19 97.8 83 59.0
FAN28G0559 Fragaria x ananassa HOM05D005814 ORTHO05D006821 1.9e-16 89.4 73 63.0
CDE11G1165 Ceratophyllum demersum HOM05D055633 ORTHO05D006821 3.6e-15 85.1 60 66.7
COL.COLO4_27610 Corchorus olitorius HOM05D005814 ORTHO05D006821 2.4e-11 72.4 60 60.0
AUR62005164 Chenopodium quinoa HOM05D005814 ORTHO05D006821 7.0e-11 70.9 60 61.7
unitig_27.g25167 Utricularia gibba HOM05D000391 ORTHO05D000293 9.2e-11 70.5 45 77.8
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 1.3e-09 66.6 75 42.7
AUR62000804 Chenopodium quinoa HOM05D005814 ORTHO05D006821 1.3e-09 66.6 62 58.1
FAN07G0664 Fragaria x ananassa HOM05D005814 ORTHO05D006821 3.9e-09 65.1 54 63.0
FAN12G4197 Fragaria x ananassa HOM05D005814 ORTHO05D006821 1.9e-08 62.8 54 61.1
FAN26G0724 Fragaria x ananassa HOM05D005814 ORTHO05D006821 2.5e-08 62.4 47 68.1
Aa31LG6G12580 Aethionema arabicum HOM05D000493 ORTHO05D001355 3.3e-08 62.0 100 36.0
CBR_g22377 Chara braunii HOM05D000552 ORTHO05D006821 3.3e-08 62.0 69 43.5
Ah.06g189510 Amaranthus hybridus HOM05D005814 ORTHO05D006821 7.3e-08 60.8 62 48.4
CBR_g9130 Chara braunii HOM05D000552 ORTHO05D006821 2.8e-07 58.9 96 33.3
Zm00001eb073920 Zea mays HOM05D000493 ORTHO05D001355 6.2e-07 57.8 100 34.0
Zm00001eb429190 Zea mays HOM05D000493 ORTHO05D001355 6.2e-07 57.8 100 34.0
A03p63770 Brassica napus HOM05D000493 ORTHO05D001355 8.0e-07 57.4 100 34.0
BraA03t15447Z Brassica rapa HOM05D000493 ORTHO05D001355 8.0e-07 57.4 100 34.0
SEGI_06173 Sequoiadendron giganteum HOM05D000493 ORTHO05D008479 8.0e-07 57.4 96 36.5
SEGI_10740 Sequoiadendron giganteum HOM05D005814 ORTHO05D006821 8.0e-07 57.4 60 50.0
SalBow5G4622 Salvia bowleyana HOM05D000493 ORTHO05D001355 1.1e-06 57.0 100 32.0
BcaB07g31720 Brassica carinata HOM05D000493 ORTHO05D001355 1.4e-06 56.6 100 34.0
Sc19g0008050 Simmondsia chinensis HOM05D000493 ORTHO05D001638 1.8e-06 56.2 101 35.6
BcaNung04345 Brassica carinata HOM05D000493 ORTHO05D001355 2.3e-06 55.8 100 34.0
BolC7t46554H Brassica oleracea HOM05D000493 ORTHO05D001355 2.3e-06 55.8 100 34.0
Cpa.g.sc55.187 Carica papaya HOM05D000493 ORTHO05D001355 2.3e-06 55.8 96 34.4
Oeu032196.1 Olea europaea HOM05D000493 ORTHO05D001355 2.3e-06 55.8 96 34.4
BcaNung05039 Brassica carinata HOM05D000493 ORTHO05D001355 4.0e-06 55.1 100 33.0
BcaC04g22960 Brassica carinata HOM05D000493 ORTHO05D001355 5.2e-06 54.7 92 34.8
C07p61280 Brassica napus HOM05D000493 ORTHO05D001355 5.2e-06 54.7 100 33.0
THA.LOC104804291 Tarenaya hassleriana HOM05D000493 ORTHO05D001355 5.2e-06 54.7 100 33.0
TWI77G0802 Tripterygium wilfordii HOM05D000493 ORTHO05D001638 6.8e-06 54.3 100 33.0
AT2G17620 Arabidopsis thaliana HOM05D000493 ORTHO05D001355 8.9e-06 53.9 100 34.0
BcaC04g22961 Brassica carinata HOM05D000493 ORTHO05D001355 8.9e-06 53.9 100 33.0
C09p13470 Brassica napus HOM05D000493 ORTHO05D001355 8.9e-06 53.9 100 33.0
BolC9t54237H Brassica oleracea HOM05D000493 ORTHO05D001355 8.9e-06 53.9 100 33.0
Cpa.g.sc535.3 Carica papaya HOM05D000493 ORTHO05D001355 8.9e-06 53.9 96 36.5


User provided reference genes

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