Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-249 865.1 421 100.0
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-114 417.5 540 48.7
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-50 204.1 206 56.8
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-38 164.9 296 37.8
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-37 161.8 288 36.8
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-37 160.2 445 29.9
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 5.4e-35 152.9 276 35.1
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 3.0e-33 147.1 272 34.2
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 8.7e-33 145.6 245 38.8
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-32 144.8 332 29.2
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-32 144.4 322 31.7
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-32 143.3 320 34.4
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.8e-30 137.9 263 34.2
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 6.4e-28 129.4 304 32.6
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-27 128.3 326 30.7
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-27 126.7 323 31.6
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.2e-26 125.2 282 31.9
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 6.0e-26 122.9 283 33.6
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 2.3e-25 120.9 176 38.1
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.7e-25 119.0 331 29.3
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.7e-25 119.0 268 31.3
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.1e-23 114.4 318 30.2
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.1e-23 114.4 323 31.3
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 3.1e-22 110.5 339 28.9
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 2.0e-21 107.8 274 30.3
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.0e-21 107.8 387 27.9
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-21 105.9 264 33.0
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 2.9e-20 104.0 263 31.2
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 4.9e-20 103.2 284 31.0
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-19 101.3 308 29.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-19 100.9 231 32.0
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-19 100.1 181 33.1
Dinv25442 Davidia involucrata HOM05D008239 ORTHO05D180046 2.1e-18 97.8 58 81.0
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 8.7e-17 92.4 314 26.8
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.5e-16 91.7 233 28.3
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.6e-16 89.7 238 28.2
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.2e-15 86.3 222 34.2
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 6.2e-15 86.3 250 28.4
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 8.2e-15 85.9 264 28.0
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-14 84.3 312 26.6
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-13 82.0 286 25.5
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-13 82.0 292 24.7
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.4e-13 80.5 278 30.9
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.5e-13 80.1 234 31.2
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 7.6e-13 79.3 245 27.3
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.0e-12 79.0 206 30.1
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.3e-12 78.6 276 26.1
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 2.2e-12 77.8 226 25.7
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 1.1e-11 75.5 215 27.0
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 1.1e-11 75.5 191 29.8
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 1.9e-11 74.7 210 29.0
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 9.3e-11 72.4 233 24.5
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-10 72.0 255 25.1
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 3.5e-10 70.5 298 23.2
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 4.6e-10 70.1 153 31.4
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 7.9e-10 69.3 294 26.2
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.8e-09 68.2 242 24.8
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 3.9e-09 67.0 159 32.7
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 6.7e-09 66.2 140 32.1
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 6.7e-09 66.2 237 25.3
BcaC03g17537 Brassica carinata HOM05D007472 ORTHO05D009477 1.1e-08 65.5 214 28.5
BolC2t11563H Brassica oleracea HOM05D007472 ORTHO05D009477 1.1e-08 65.5 214 28.5
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.5e-08 65.1 135 34.1
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 1.9e-08 64.7 202 26.7
C02p55120 Brassica napus HOM05D007472 ORTHO05D009477 2.5e-08 64.3 214 28.0
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 2.5e-08 64.3 262 23.7
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 2.5e-08 64.3 269 26.0
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 3.3e-08 63.9 161 32.3
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 3.3e-08 63.9 161 32.3
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.7e-08 63.2 269 25.3
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.7e-08 63.2 269 25.3
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 1.6e-07 61.6 220 30.0
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.2e-07 61.2 177 26.0
Dinv41767 Davidia involucrata HOM05D018862 ORTHO05D009800 2.2e-07 61.2 270 25.9
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.2e-07 61.2 239 24.3
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 3.1e-06 57.4 219 28.3
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 5.3e-06 56.6 223 25.1
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 6.9e-06 56.2 108 38.9
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 9.0e-06 55.8 85 35.3


User provided reference genes

Program Settings