Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 1.1e-44 183.0 92 100.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 1.0e-31 139.8 94 76.6
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.7e-27 125.2 95 72.6
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.1e-25 119.8 95 68.4
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 9.4e-25 116.7 95 65.3
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 1.2e-24 116.3 92 70.7
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 6.1e-24 114.0 94 68.1
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.2e-22 109.8 94 60.6
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 1.3e-21 106.3 95 58.9
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 1.7e-21 105.9 92 62.0
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.8e-20 102.4 92 58.7
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 3.1e-20 101.7 95 64.2
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 2.0e-19 99.0 90 62.2
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 3.5e-19 98.2 96 59.4
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 2.2e-18 95.5 96 58.3
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 3.8e-18 94.7 95 55.8
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 5.0e-18 94.4 84 58.3
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 8.5e-18 93.6 96 57.3
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.1e-17 93.2 95 53.7
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.5e-17 92.8 100 53.0
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 1.5e-17 92.8 98 56.1
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 7.2e-17 90.5 96 57.3
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 9.5e-17 90.1 101 54.5
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 2.8e-16 88.6 86 54.7
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 8.0e-16 87.0 84 58.3
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 1.0e-15 86.7 96 51.0
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 2.3e-15 85.5 84 57.1
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 5.2e-15 84.3 96 53.1
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 8.8e-15 83.6 82 53.7
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 1.5e-14 82.8 90 52.2
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.6e-14 82.0 94 52.1
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 3.4e-14 81.6 98 50.0
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 4.4e-14 81.3 84 56.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 7.5e-14 80.5 95 52.6
TAR623G0909 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.7e-13 79.3 66 62.1
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 2.2e-13 79.0 94 51.1
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 2.8e-13 78.6 93 49.5
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 1.1e-12 76.6 88 53.4
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.4e-12 76.3 93 50.5
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 1.8e-12 75.9 89 52.8
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 1.8e-12 75.9 96 47.9
MBI19_g09311_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 3.1e-12 75.1 94 44.7
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 4.1e-12 74.7 98 46.9
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 5.4e-12 74.3 105 44.8
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 5.4e-12 74.3 97 47.4
Dinv25035 Davidia involucrata HOM05D039163 ORTHO05D008758 5.4e-12 74.3 105 42.9
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 5.4e-12 74.3 126 41.3
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 7.0e-12 73.9 46 78.3
MBI19_g38148_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 9.2e-12 73.6 94 43.6
Peaxi162Scf00358g00029 Petunia axillaris HOM05D018532 ORTHO05D008758 9.2e-12 73.6 90 48.9
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 1.2e-11 73.2 98 48.0
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 4.5e-11 71.2 95 47.4
Oeu052778.1 Olea europaea HOM05D026374 ORTHO05D008758 5.9e-11 70.9 84 47.6
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 1.0e-10 70.1 94 44.7
SalBow1G6856 Salvia bowleyana HOM05D007691 ORTHO05D008758 1.3e-10 69.7 70 50.0
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.7e-10 69.3 96 43.8
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 1.7e-10 69.3 83 50.6
QL07p017231 Quercus lobata HOM05D007691 ORTHO05D008758 1.7e-10 69.3 94 50.0
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 2.3e-10 68.9 82 48.8
Nitab4.5_0007090g0010 Nicotiana tabacum HOM05D018532 ORTHO05D008758 2.3e-10 68.9 92 45.7
Cc04_g08420 Coffea canephora HOM05D007691 ORTHO05D008758 5.0e-10 67.8 95 45.3
Sc15g0006900 Simmondsia chinensis HOM05D007691 ORTHO05D008758 8.6e-10 67.0 82 47.6
Duzib128G0872 Durio zibethinus HOM05D014272 ORTHO05D008758 1.1e-09 66.6 98 44.9
MD12G1012300 Malus domestica HOM05D007691 ORTHO05D008758 1.1e-09 66.6 91 47.3
Prupe.7G016200 Prunus persica HOM05D007691 ORTHO05D008758 1.1e-09 66.6 95 49.5
Oeu052775.1 Olea europaea HOM05D026374 ORTHO05D008758 1.5e-09 66.2 84 47.6
Glyma.03G008000 Glycine max HOM05D017020 ORTHO05D016669 1.9e-09 65.9 92 43.5
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 1.9e-09 65.9 89 44.9
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 1.9e-09 65.9 86 44.2
arahy.Tifrunner.gnm1.ann1.N1UETT Arachis hypogaea HOM05D007691 ORTHO05D008758 2.5e-09 65.5 95 46.3
Hund15081 Selenicereus undatus HOM05D036338 ORTHO05D008758 2.5e-09 65.5 89 43.8
arahy.Tifrunner.gnm1.ann1.BJ9957 Arachis hypogaea HOM05D007691 ORTHO05D008758 3.3e-09 65.1 101 44.6
QL07p017183 Quercus lobata HOM05D007691 ORTHO05D008758 5.6e-09 64.3 94 48.9
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 7.3e-09 63.9 89 46.1
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 1.2e-08 63.2 81 45.7
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 1.2e-08 63.2 82 42.7
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 1.2e-08 63.2 90 43.3
PGR042G3671 Punica granatum HOM05D026603 ORTHO05D008758 1.2e-08 63.2 90 43.3
Eucgr.K01539 Eucalyptus grandis HOM05D026603 ORTHO05D035192 2.1e-08 62.4 88 45.5
Gorai.004G252600 Gossypium raimondii HOM05D007691 ORTHO05D008758 2.1e-08 62.4 91 44.0
Glyma.19G117900 Glycine max HOM05D017020 ORTHO05D016669 2.8e-08 62.0 92 41.3
Nitab4.5_0002028g0030 Nicotiana tabacum HOM05D018532 ORTHO05D008758 2.8e-08 62.0 89 46.1
Sopen03g029460 Solanum pennellii HOM05D018532 ORTHO05D008758 2.8e-08 62.0 91 42.9
PGSC0003DMG400010130 Solanum tuberosum HOM05D018532 ORTHO05D008758 2.8e-08 62.0 91 44.0
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 2.8e-08 62.0 97 41.2
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 3.6e-08 61.6 81 44.4
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 4.7e-08 61.2 81 45.7
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 6.1e-08 60.8 34 73.5
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 6.1e-08 60.8 80 46.2
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.4e-07 59.7 82 43.9
HPP92_006675 Vanilla planifolia HOM05D007691 ORTHO05D008758 1.4e-07 59.7 84 44.0
Oeu063715.1 Olea europaea HOM05D046649 ORTHO05D008758 1.8e-07 59.3 85 48.2
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 2.3e-07 58.9 61 49.2
Sc07g0007580 Simmondsia chinensis HOM05D007691 ORTHO05D008758 2.3e-07 58.9 88 44.3
PSO675G8373 Papaver somniferum HOM05D046060 ORTHO05D008758 3.0e-07 58.5 97 43.3
PSO541G6523 Papaver somniferum HOM05D046060 ORTHO05D008758 4.0e-07 58.2 98 41.8
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 5.2e-07 57.8 89 41.6
Lj1g0024666 Lotus japonicus HOM05D007691 ORTHO05D008758 5.2e-07 57.8 97 41.2
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 5.2e-07 57.8 96 40.6
Eucgr.K01538 Eucalyptus grandis HOM05D026603 ORTHO05D035192 1.2e-06 56.6 89 41.6
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 1.2e-06 56.6 92 39.1
Nitab4.5_0000011g0030 Nicotiana tabacum HOM05D018532 ORTHO05D008758 1.2e-06 56.6 89 40.4
Lj1g0000066 Lotus japonicus HOM05D017020 ORTHO05D016669 1.5e-06 56.2 95 41.1
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.5e-06 56.2 82 37.8
Os01g0815400 Oryza sativa ssp. japonica HOM05D016423 ORTHO05D298867 1.5e-06 56.2 94 40.4
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 2.0e-06 55.8 82 40.2
Phvul.001G106200 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 2.0e-06 55.8 91 40.7
Phvul.001G106300 Phaseolus vulgaris HOM05D017020 ORTHO05D016669 2.0e-06 55.8 92 38.0
EL10Ac5g11703 Beta vulgaris HOM05D036338 ORTHO05D038999 2.6e-06 55.5 87 42.5
Lsat_1_v5_gn_8_79181 Lactuca sativa HOM05D036373 ORTHO05D035165 2.6e-06 55.5 88 38.6
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 3.4e-06 55.1 82 45.1
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 3.4e-06 55.1 82 45.1
Psat1g089160 Pisum sativum HOM05D007691 ORTHO05D008758 3.4e-06 55.1 91 36.3
Eucgr.K01540 Eucalyptus grandis HOM05D026603 ORTHO05D035192 4.4e-06 54.7 89 41.6
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 4.4e-06 54.7 82 45.1
QL03p068707 Quercus lobata HOM05D007106 ORTHO05D007770 4.4e-06 54.7 86 34.9
HPP92_014367 Vanilla planifolia HOM05D007691 ORTHO05D431305 4.4e-06 54.7 34 70.6
CANSAT78G2271 Cannabis sativa HOM05D007691 ORTHO05D008758 5.7e-06 54.3 92 40.2
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 7.5e-06 53.9 83 38.6
Psat1g089040 Pisum sativum HOM05D017020 ORTHO05D016669 7.5e-06 53.9 94 37.2
Sc04g0008030 Simmondsia chinensis HOM05D024185 ORTHO05D023810 7.5e-06 53.9 93 35.5
Migut.K00211 Erythranthe guttata HOM05D007691 ORTHO05D008758 9.8e-06 53.5 79 38.0
Gohir.D06G002420 Gossypium hirsutum HOM05D014272 ORTHO05D008758 9.8e-06 53.5 92 41.3
Oeu034426.2 Olea europaea HOM05D046649 ORTHO05D008758 9.8e-06 53.5 89 42.7
TPR.G33917 Trifolium pratense HOM05D007691 ORTHO05D008758 9.8e-06 53.5 94 38.3


User provided reference genes

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