Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21191 Davidia involucrata HOM05D000204 ORTHO05D005102 1.1e-62 243.0 117 100.0
Dinv21188 Davidia involucrata HOM05D000204 ORTHO05D005102 7.3e-22 107.5 66 83.3
Dinv31701 Davidia involucrata HOM05D000204 ORTHO05D005102 8.3e-18 94.0 67 77.6
CiPaw.09G015700 Carya illinoinensis HOM05D000204 ORTHO05D005102 3.0e-15 85.5 66 66.7
GSVIVG01033868001 Vitis vinifera HOM05D000204 ORTHO05D005102 4.3e-14 81.6 65 67.7
Duzib128G1821 Durio zibethinus HOM05D000204 ORTHO05D005102 2.0e-11 72.8 65 58.5
Gorai.009G400900 Gossypium raimondii HOM05D000204 ORTHO05D005102 2.0e-11 72.8 65 60.0
Nn6g34853 Nelumbo nucifera HOM05D000204 ORTHO05D005102 2.6e-11 72.4 66 65.2
Thecc.05G091800 Theobroma cacao HOM05D000204 ORTHO05D005102 5.8e-11 71.2 65 58.5
Nn2g14194 Nelumbo nucifera HOM05D000204 ORTHO05D005102 9.9e-11 70.5 66 62.1
Gohir.A04G061700 Gossypium hirsutum HOM05D000204 ORTHO05D005102 1.3e-10 70.1 65 56.9
Aqoxy4G02741 Aquilegia oxysepala HOM05D000204 ORTHO05D005102 1.7e-10 69.7 65 63.1
Duzib093G2130 Durio zibethinus HOM05D000204 ORTHO05D005102 2.2e-10 69.3 65 56.9
TAR636G2399 Trochodendron aralioides HOM05D000204 ORTHO05D005102 4.9e-10 68.2 66 60.6
Lj5g0007516 Lotus japonicus HOM05D000204 ORTHO05D005102 6.4e-10 67.8 94 43.6
RcHm_v2.0_Chr3g0474301 Rosa chinensis HOM05D000204 ORTHO05D005102 6.4e-10 67.8 66 57.6
Rhsim03G0074000 Rhododendron simsii HOM05D000204 ORTHO05D005102 1.4e-09 66.6 71 62.0
CiPaw.10G011300 Carya illinoinensis HOM05D000204 ORTHO05D005102 1.9e-09 66.2 66 60.6
Phvul.007G227100 Phaseolus vulgaris HOM05D000204 ORTHO05D005102 1.9e-09 66.2 67 53.7
Glyma.10G074500 Glycine max HOM05D000204 ORTHO05D005102 2.4e-09 65.9 68 57.4
MD12G1027600 Malus domestica HOM05D000204 ORTHO05D005102 2.4e-09 65.9 66 57.6
Oeu047854.1 Olea europaea HOM05D000204 ORTHO05D005102 3.2e-09 65.5 68 58.8
QL07p038584 Quercus lobata HOM05D000204 ORTHO05D005102 3.2e-09 65.5 69 59.4
Manes.08G026900 Manihot esculenta HOM05D000204 ORTHO05D005102 7.1e-09 64.3 68 57.4
TWI53G1092 Tripterygium wilfordii HOM05D000204 ORTHO05D005102 9.2e-09 63.9 68 60.3
FAN05G1627 Fragaria x ananassa HOM05D000204 ORTHO05D005102 1.6e-08 63.2 71 54.9
MD14G1028000 Malus domestica HOM05D000204 ORTHO05D005102 1.6e-08 63.2 67 58.2
Ciclev10013674m.g Citrus clementina HOM05D000204 ORTHO05D005102 2.1e-08 62.8 66 51.5
Manes.09G053700 Manihot esculenta HOM05D000204 ORTHO05D005102 2.1e-08 62.8 68 55.9
Glyma.02G202200 Glycine max HOM05D000204 ORTHO05D005102 2.7e-08 62.4 68 55.9
TAR633G1312 Trochodendron aralioides HOM05D000204 ORTHO05D005102 2.7e-08 62.4 60 60.0
FvH4_6g19170 Fragaria vesca HOM05D000204 ORTHO05D005102 4.6e-08 61.6 71 54.9
FAN02G1065 Fragaria x ananassa HOM05D000204 ORTHO05D005102 4.6e-08 61.6 71 54.9
FAN09G0518 Fragaria x ananassa HOM05D000204 ORTHO05D005102 4.6e-08 61.6 71 54.9
FAN09G1586 Fragaria x ananassa HOM05D000204 ORTHO05D005102 4.6e-08 61.6 71 54.9
FAN14G3391 Fragaria x ananassa HOM05D000204 ORTHO05D005102 4.6e-08 61.6 71 54.9
Oeu047206.1 Olea europaea HOM05D000204 ORTHO05D005102 7.8e-08 60.8 69 53.6
Oeu047207.1 Olea europaea HOM05D000204 ORTHO05D005102 7.8e-08 60.8 69 53.6
COL.COLO4_29698 Corchorus olitorius HOM05D000204 ORTHO05D005102 1.7e-07 59.7 69 50.7
Medtr7g104940 Medicago truncatula HOM05D000204 ORTHO05D005102 1.7e-07 59.7 71 49.3
TWI74G0598 Tripterygium wilfordii HOM05D000204 ORTHO05D005102 3.0e-07 58.9 68 54.4
TAR369G0485 Trochodendron aralioides HOM05D000204 ORTHO05D005102 3.9e-07 58.5 65 60.0
Gohir.A09G140000 Gossypium hirsutum HOM05D000204 ORTHO05D005102 5.1e-07 58.2 67 53.7
Actinidia24387 Actinidia chinensis HOM05D000204 ORTHO05D005102 8.6e-07 57.4 73 52.1
Gorai.006G154300 Gossypium raimondii HOM05D000204 ORTHO05D005102 8.6e-07 57.4 67 53.7
Potri.006G211000 Populus trichocarpa HOM05D000204 ORTHO05D005102 8.6e-07 57.4 65 52.3
Prupe.7G104000 Prunus persica HOM05D000204 ORTHO05D005102 8.6e-07 57.4 69 52.2
Gohir.D09G134500 Gossypium hirsutum HOM05D000204 ORTHO05D005102 1.5e-06 56.6 67 52.2
Lsat_1_v5_gn_9_20900 Lactuca sativa HOM05D000204 ORTHO05D005102 1.5e-06 56.6 68 58.8
Lalb_Chr06g0172431 Lupinus albus HOM05D000204 ORTHO05D005102 1.5e-06 56.6 65 50.8
Medtr1g059770 Medicago truncatula HOM05D000204 ORTHO05D005102 1.5e-06 56.6 69 50.7
Actinidia05416 Actinidia chinensis HOM05D000204 ORTHO05D005102 2.5e-06 55.8 73 52.1
Oeu025670.1 Olea europaea HOM05D000204 ORTHO05D005102 3.3e-06 55.5 69 46.4
Psat3g032080 Pisum sativum HOM05D000204 ORTHO05D005102 3.3e-06 55.5 70 47.1
Oeu023809.1 Olea europaea HOM05D000204 ORTHO05D005102 4.3e-06 55.1 70 51.4
ClCG04G010130 Citrullus lanatus HOM05D000204 ORTHO05D005102 5.6e-06 54.7 74 52.7
Medtr7g104950 Medicago truncatula HOM05D000204 ORTHO05D005102 5.6e-06 54.7 71 47.9
CANSAT64G0698 Cannabis sativa HOM05D000204 ORTHO05D005102 7.3e-06 54.3 82 42.7
TPR.G14769 Trifolium pratense HOM05D000204 ORTHO05D005102 9.5e-06 53.9 65 49.2


User provided reference genes

Program Settings