Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 1.9e-103 379.4 224 100.0
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.6e-41 173.7 367 40.1
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.0e-40 169.5 370 37.0
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 2.6e-36 156.4 360 37.2
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 3.4e-36 156.0 370 37.0
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 7.6e-36 154.8 371 38.3
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.7e-35 153.7 313 40.6
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.9e-35 152.9 365 35.9
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 4.2e-34 149.1 359 36.8
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 2.1e-33 146.7 390 34.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 7.9e-33 144.8 369 34.4
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.8e-32 143.7 358 36.0
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 3.9e-32 142.5 347 34.9
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 8.7e-32 141.4 367 34.6
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.1e-31 141.0 350 34.6
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.6e-30 137.1 366 40.2
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.8e-30 136.3 357 35.6
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 4.8e-30 135.6 358 36.0
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 8.1e-30 134.8 357 34.5
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 8.1e-30 134.8 350 35.4
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 8.1e-30 134.8 391 33.8
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 1.4e-29 134.0 343 32.9
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 1.4e-29 134.0 351 35.9
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 2.4e-29 133.3 361 39.9
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 3.1e-29 132.9 365 34.2
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 3.1e-29 132.9 323 36.5
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 4.0e-29 132.5 342 36.3
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 5.3e-29 132.1 356 34.6
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 5.3e-29 132.1 349 35.0
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.2e-28 131.0 350 34.6
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.5e-28 130.6 350 34.9
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 2.0e-28 130.2 355 36.9
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 4.5e-28 129.0 354 36.2
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 2.2e-27 126.7 360 33.3
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 2.9e-27 126.3 366 32.8
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.4e-26 124.0 356 34.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.4e-26 124.0 400 31.8
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 1.9e-26 123.6 331 33.8
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 4.2e-26 122.5 357 33.9
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 7.1e-26 121.7 327 34.6
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 9.3e-26 121.3 380 31.3
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 2.7e-25 119.8 326 34.7
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 1.0e-24 117.9 373 32.2
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.3e-24 117.5 349 33.2
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 2.3e-24 116.7 320 31.9
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 2.3e-24 116.7 343 33.5
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.9e-24 115.9 315 35.9
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 5.1e-24 115.5 354 34.7
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 6.7e-24 115.2 365 31.5
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 1.5e-23 114.0 344 34.3
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 1.9e-23 113.6 357 32.5
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 7.4e-23 111.7 343 31.8
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 7.4e-23 111.7 160 47.5
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.1e-22 110.2 334 33.8
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 2.4e-21 106.7 374 29.9
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 3.1e-21 106.3 334 33.5
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 3.4e-20 102.8 301 34.9
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.4e-20 102.8 69 75.4
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.4e-20 102.8 74 71.6
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 4.5e-20 102.4 340 32.4
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.6e-20 101.7 73 71.2
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.6e-20 101.7 64 82.8
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.9e-19 99.8 149 47.7
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.0e-19 99.0 74 68.9
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.0e-19 99.0 74 68.9
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 6.5e-19 98.6 90 64.4
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 6.5e-19 98.6 328 31.7
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 8.5e-19 98.2 353 30.9
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.5e-19 98.2 76 73.7
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.5e-19 98.2 76 72.4
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 1.1e-18 97.8 67 76.1
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.4e-18 97.4 329 32.5
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 3.2e-18 96.3 328 33.2
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 2.7e-17 93.2 334 30.5
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.0e-16 91.3 333 30.0
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.0e-16 91.3 370 29.2
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.8e-16 90.5 456 27.4
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.8e-16 90.5 86 64.0
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 3.9e-16 89.4 439 26.7
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 8.7e-16 88.2 370 29.5
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.1e-15 87.8 48 85.4
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 1.9e-15 87.0 153 45.1
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 3.3e-15 86.3 75 60.0
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 3.3e-15 86.3 161 41.0
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 4.3e-15 85.9 340 28.8
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 4.3e-15 85.9 341 29.0
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.4e-15 85.1 73 64.4
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 7.4e-15 85.1 342 28.9
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.6e-14 84.0 84 59.5
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.2e-14 83.6 63 66.7
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 4.8e-14 82.4 419 26.7
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 1.8e-13 80.5 327 30.3
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 2.4e-13 80.1 336 30.7
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 5.3e-13 79.0 81 54.3
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 9.0e-13 78.2 335 27.2
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 9.0e-13 78.2 335 27.2
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 2.6e-12 76.6 324 28.4
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 3.4e-12 76.3 300 30.0
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 4.5e-12 75.9 59 61.0
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.0e-11 74.7 331 27.2
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.0e-11 74.7 331 27.2
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.3e-11 74.3 329 28.9
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.7e-11 73.9 53 67.9
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 6.5e-11 72.0 50 66.0
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 1.4e-10 70.9 324 28.4
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.9e-10 70.5 81 46.9
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 4.2e-10 69.3 94 48.9
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 5.5e-10 68.9 339 28.3
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 5.5e-10 68.9 56 58.9
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 5.5e-10 68.9 56 58.9
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 2.3e-08 63.5 89 46.1
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 3.0e-08 63.2 61 54.1
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 3.9e-08 62.8 55 61.8
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 5.1e-08 62.4 352 25.3
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 8.8e-08 61.6 399 24.6
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 2.6e-07 60.1 311 29.9
BcaNung06177 Brassica carinata HOM05D006327 ORTHO05D007952 6.3e-06 55.5 71 52.1


User provided reference genes

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