Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18386 Davidia involucrata HOM05D004150 ORTHO05D005087 1.2e-244 849.4 418 100.0
Dinv15009 Davidia involucrata HOM05D004150 ORTHO05D005087 3.9e-195 684.9 388 85.6
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 8.5e-190 667.2 386 83.4
CSS0001873 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 5.3e-184 647.9 388 82.0
CSS0042666 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 8.5e-182 640.6 387 81.7
Cfa019528 Carpinus fangiana HOM05D004150 ORTHO05D005087 1.0e-179 633.6 388 77.8
GSVIVG01014152001 Vitis vinifera HOM05D004150 ORTHO05D005087 3.4e-178 628.6 386 78.2
TAR629G2423 Trochodendron aralioides HOM05D004150 ORTHO05D005087 7.0e-176 620.9 387 77.3
TAR627G0919 Trochodendron aralioides HOM05D004150 ORTHO05D005087 1.6e-175 619.8 389 77.9
Cc05_g10890 Coffea canephora HOM05D004150 ORTHO05D005087 1.5e-173 613.2 386 77.7
CANSAT56G2087 Cannabis sativa HOM05D004150 ORTHO05D005087 6.1e-172 607.8 389 74.3
Nn6g34456 Nelumbo nucifera HOM05D004150 ORTHO05D005087 3.0e-171 605.5 381 75.9
CiPaw.11G157600 Carya illinoinensis HOM05D004150 ORTHO05D005087 6.8e-171 604.4 388 74.7
Manes.03G091700 Manihot esculenta HOM05D004150 ORTHO05D005087 4.4e-170 601.7 387 75.7
Oeu010027.3 Olea europaea HOM05D004150 ORTHO05D005087 1.3e-169 600.1 389 75.6
Potri.003G026500 Populus trichocarpa HOM05D004150 ORTHO05D005087 4.9e-169 598.2 388 73.5
Oeu058459.1 Olea europaea HOM05D004150 ORTHO05D005087 1.8e-168 596.3 387 74.9
Lj1A826G61 Lonicera japonica HOM05D004150 ORTHO05D005087 3.1e-168 595.5 397 74.1
Potri.001G386700 Populus trichocarpa HOM05D004150 ORTHO05D005087 9.2e-168 594.0 390 73.3
Glyma.13G266400 Glycine max HOM05D004150 ORTHO05D005087 2.0e-167 592.8 388 73.7
Manes.15G097400 Manihot esculenta HOM05D004150 ORTHO05D005087 2.0e-167 592.8 387 73.9
Prupe.4G158300 Prunus persica HOM05D004150 ORTHO05D005087 1.0e-166 590.5 391 73.1
PGR083G0816 Punica granatum HOM05D004150 ORTHO05D005087 8.6e-166 587.4 391 71.4
TWI38G0344 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 1.1e-165 587.0 391 71.9
VMungo1080G1533 Vigna mungo HOM05D004150 ORTHO05D005087 1.1e-165 587.0 392 73.7
Lsat_1_v5_gn_9_100501 Lactuca sativa HOM05D004150 ORTHO05D005087 2.5e-165 585.9 389 74.0
Phvul.005G079200 Phaseolus vulgaris HOM05D004150 ORTHO05D005087 2.5e-165 585.9 392 73.5
MD03G1246300 Malus domestica HOM05D004150 ORTHO05D005087 5.6e-165 584.7 390 72.1
Sc03g0010640 Simmondsia chinensis HOM05D004150 ORTHO05D005087 5.6e-165 584.7 390 72.1
Glyma.12G231700 Glycine max HOM05D004150 ORTHO05D005087 7.3e-165 584.3 390 73.3
Eucgr.F01300 Eucalyptus grandis HOM05D004150 ORTHO05D005087 2.8e-164 582.4 393 72.0
Potri.011G106600 Populus trichocarpa HOM05D004150 ORTHO05D005087 3.6e-164 582.0 390 71.8
Thecc.07G119700 Theobroma cacao HOM05D004150 ORTHO05D005087 1.0e-163 580.5 388 72.4
Gohir.A01G052900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.0e-163 578.9 388 71.9
Atru.chr2.2029 Acer truncatum HOM05D004150 ORTHO05D005087 4.0e-163 578.6 387 73.9
TWI39G0561 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 4.0e-163 578.6 390 71.8
Actinidia21439 Actinidia chinensis HOM05D004150 ORTHO05D005087 6.8e-163 577.8 388 74.5
Atru.chr2.2041 Acer truncatum HOM05D004150 ORTHO05D005087 3.4e-162 575.5 387 73.6
Gorai.002G053300 Gossypium raimondii HOM05D004150 ORTHO05D005087 4.4e-162 575.1 389 72.2
SGA_v2.0_scaffold130G34274 Striga asiatica HOM05D004150 ORTHO05D005087 4.4e-162 575.1 412 68.7
COL.COLO4_17523 Corchorus olitorius HOM05D004150 ORTHO05D005087 7.5e-162 574.3 387 71.6
Gohir.D01G042500 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.7e-161 572.0 389 72.0
RcHm_v2.0_Chr5g0030011 Rosa chinensis HOM05D004150 ORTHO05D005087 3.7e-161 572.0 388 71.9
CsaV3_4G032910 Cucumis sativus L. HOM05D004150 ORTHO05D005087 4.9e-161 571.6 385 72.2
Ca_03941_v3 Cicer arietinum L. HOM05D004150 ORTHO05D005087 8.3e-161 570.9 391 72.1
MBI06_g16571_MAGBIO Magnolia biondii HOM05D004150 ORTHO05D005087 3.2e-160 568.9 387 71.1
Psat5g234480 Pisum sativum HOM05D004150 ORTHO05D005087 3.2e-160 568.9 391 71.4
Sed0003063 Sechium edule HOM05D004150 ORTHO05D005087 1.6e-159 566.6 389 71.5
PGSC0003DMG400007094 Solanum tuberosum HOM05D004150 ORTHO05D005087 1.6e-159 566.6 428 66.1
MD11G1267300 Malus domestica HOM05D004150 ORTHO05D005087 2.7e-159 565.8 390 69.7
Sopen07g030520 Solanum pennellii HOM05D004150 ORTHO05D005087 5.9e-159 564.7 428 65.9
MSTRG.14976 Avicennia marina HOM05D004150 ORTHO05D005087 1.0e-158 563.9 386 71.2
CAN.G375.32 Capsicum annuum HOM05D004150 ORTHO05D005087 1.3e-158 563.5 430 65.1
Gohir.D13G154200 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.3e-158 562.8 388 71.6
Rhsim04G0036400 Rhododendron simsii HOM05D004150 ORTHO05D005087 2.3e-158 562.8 397 72.3
Nitab4.5_0000347g0180 Nicotiana tabacum HOM05D004150 ORTHO05D005087 3.0e-158 562.4 428 65.9
vmacro09408 Vaccinium macrocarpon HOM05D004150 ORTHO05D005087 3.9e-158 562.0 395 72.4
Solyc07g062250.3 Solanum lycopersicum HOM05D004150 ORTHO05D005087 5.0e-158 561.6 428 65.7
Rhsim04G0035400 Rhododendron simsii HOM05D004150 ORTHO05D005087 8.6e-158 560.8 397 72.0
Migut.H02018 Erythranthe guttata HOM05D004150 ORTHO05D005087 1.1e-157 560.5 386 69.9
Gohir.A13G149900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.9e-157 559.7 388 71.6
EL10Ac4g08396 Beta vulgaris HOM05D004150 ORTHO05D005087 9.5e-157 557.4 389 69.7
MELO3C025660.2 Cucumis melo HOM05D004150 ORTHO05D005087 1.6e-156 556.6 399 68.4
Lj3g0004524 Lotus japonicus HOM05D004150 ORTHO05D005087 2.8e-156 555.8 396 71.2
Peaxi162Scf00111g01477 Petunia axillaris HOM05D004150 ORTHO05D005087 1.0e-155 553.9 429 64.6
Medtr2g075340 Medicago truncatula HOM05D004150 ORTHO05D005087 1.4e-155 553.5 382 69.9
FvH4_3g17970 Fragaria vesca HOM05D004150 ORTHO05D005087 1.8e-155 553.1 389 70.7
ClCG11G017260 Citrullus lanatus HOM05D004150 ORTHO05D005087 3.1e-155 552.4 456 61.4
Sabra16G0254300 Salix brachista HOM05D004150 ORTHO05D005087 3.1e-155 552.4 437 64.1
Ciclev10019972m.g Citrus clementina HOM05D004150 ORTHO05D005087 4.0e-155 552.0 392 69.6
FAN21G0088 Fragaria x ananassa HOM05D004150 ORTHO05D005087 5.2e-155 551.6 392 69.4
THA.LOC104815577 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 1.2e-154 550.4 389 69.4
Lalb_Chr25g0285681 Lupinus albus HOM05D004150 ORTHO05D005087 7.5e-154 547.7 394 69.8
Sabra11G0094900 Salix brachista HOM05D004150 ORTHO05D005087 7.5e-154 547.7 433 64.7
HanXRQChr10g0305531 Helianthus annuus HOM05D004150 ORTHO05D005087 1.7e-153 546.6 394 68.3
PSO170G1443 Papaver somniferum HOM05D004150 ORTHO05D005087 1.7e-153 546.6 393 67.4
THA.LOC104810428 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 1.7e-153 546.6 389 68.6
Actinidia12595 Actinidia chinensis HOM05D004150 ORTHO05D005087 2.4e-152 542.7 453 62.0
Aqoxy1G01964 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 6.0e-151 538.1 390 67.7
CiPaw.12G111300 Carya illinoinensis HOM05D004150 ORTHO05D005087 7.8e-151 537.7 339 76.7
Nn3g21055 Nelumbo nucifera HOM05D004150 ORTHO05D005087 7.8e-151 537.7 386 69.7
PSO782G0021 Papaver somniferum HOM05D004150 ORTHO05D005087 1.0e-150 537.3 393 66.7
Gorai.013G174200 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.3e-150 536.2 440 63.2
Lalb_Chr19g0133751 Lupinus albus HOM05D004150 ORTHO05D005087 5.0e-150 535.0 392 68.4
FAN16G0401 Fragaria x ananassa HOM05D004150 ORTHO05D005087 3.6e-148 528.9 425 64.0
FAN25G1025 Fragaria x ananassa HOM05D004150 ORTHO05D005087 6.2e-148 528.1 427 63.9
HanXRQChr17g0556791 Helianthus annuus HOM05D004150 ORTHO05D005087 3.1e-147 525.8 376 67.6
FAN11G2611 Fragaria x ananassa HOM05D004150 ORTHO05D005087 9.8e-146 520.8 408 65.9
SalBow7G0391 Salvia bowleyana HOM05D004150 ORTHO05D005087 1.1e-144 517.3 386 68.1
Aa31LG8G2040 Aethionema arabicum HOM05D004150 ORTHO05D005087 1.2e-143 513.8 382 66.0
AL3G27140 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 3.3e-141 505.8 392 65.1
ECA234G0958 Erigeron canadensis HOM05D004150 ORTHO05D005087 4.3e-141 505.4 395 64.6
TPR.G13030 Trifolium pratense HOM05D004150 ORTHO05D005087 4.3e-141 505.4 394 64.5
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 5.2e-139 498.4 392 63.0
AT3G14830 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 1.5e-138 496.9 392 63.3
AUR62019617 Chenopodium quinoa HOM05D004150 ORTHO05D005087 2.6e-138 496.1 392 64.5
Lalb_Chr03g0031251 Lupinus albus HOM05D004150 ORTHO05D005087 4.4e-138 495.4 391 63.7
AUR62039606 Chenopodium quinoa HOM05D004150 ORTHO05D005087 5.8e-138 495.0 392 64.3
CARHR089770 Cardamine hirsuta HOM05D004150 ORTHO05D005087 7.6e-138 494.6 394 63.7
Thhalv10011465m.g Eutrema salsugineum HOM05D004150 ORTHO05D005087 6.4e-137 491.5 376 64.4
Sp1g39990 Schrenkiella parvula HOM05D004150 ORTHO05D005087 6.4e-137 491.5 378 64.6
Carub.0003s1449 Capsella rubella HOM05D004150 ORTHO05D005087 1.3e-134 483.8 397 62.0
Hund10457 Selenicereus undatus HOM05D004150 ORTHO05D005087 8.6e-134 481.1 391 62.9
BcaC05g29034 Brassica carinata HOM05D004150 ORTHO05D005087 1.9e-133 479.9 385 61.8
BolC5t33929H Brassica oleracea HOM05D004150 ORTHO05D005087 5.6e-133 478.4 385 62.1
C05p52450 Brassica napus HOM05D004150 ORTHO05D005087 9.6e-133 477.6 385 61.3
BraA05t22282Z Brassica rapa HOM05D004150 ORTHO05D005087 3.1e-131 472.6 376 60.9
BcaB06g25355 Brassica carinata HOM05D004150 ORTHO05D005087 4.0e-131 472.2 387 62.3
CARHR043670 Cardamine hirsuta HOM05D004150 ORTHO05D005087 4.0e-131 472.2 375 62.4
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 5.2e-131 471.9 390 63.1
Carub.0001s4264 Capsella rubella HOM05D004150 ORTHO05D005087 6.9e-131 471.5 376 62.0
A05p34660 Brassica napus HOM05D004150 ORTHO05D005087 2.0e-130 469.9 377 60.7
AT1G53450 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 8.4e-129 464.5 376 60.9
BraA06t23329Z Brassica rapa HOM05D004150 ORTHO05D005087 5.4e-128 461.8 380 61.6
BcaC08g43529 Brassica carinata HOM05D004150 ORTHO05D005087 9.3e-128 461.1 380 61.3
BolC6t35999H Brassica oleracea HOM05D004150 ORTHO05D005087 9.3e-128 461.1 380 61.3
A06p01010 Brassica napus HOM05D004150 ORTHO05D005087 1.2e-127 460.7 380 61.8
ATR0127G006 Amborella trichopoda HOM05D004150 ORTHO05D005087 2.1e-127 459.9 391 60.6
BcaB07g33329 Brassica carinata HOM05D004150 ORTHO05D005087 5.1e-126 455.3 379 60.9
C06p09220 Brassica napus HOM05D004150 ORTHO05D005087 2.1e-124 449.9 381 60.6
CDE06G0863 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 2.8e-124 449.5 383 60.3
Zm00001eb361900 Zea mays HOM05D004150 ORTHO05D005087 1.5e-117 427.2 408 55.1
ECA240G3777 Erigeron canadensis HOM05D004150 ORTHO05D005087 1.9e-117 426.8 310 67.4
Os01g0729900 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.4e-115 420.6 401 54.1
Zm00001eb154220 Zea mays HOM05D004150 ORTHO05D005087 4.9e-113 412.1 407 54.8
Os05g0530300 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.1e-112 411.0 418 51.2
CDE02G2021 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 3.7e-108 396.0 294 66.0
QL08p025853 Quercus lobata HOM05D004150 ORTHO05D005087 6.2e-108 395.2 202 89.1
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 3.1e-107 392.9 295 70.5
unitig_21.g20061 Utricularia gibba HOM05D004150 ORTHO05D005087 2.2e-105 386.7 387 53.0
HPP92_005189 Vanilla planifolia HOM05D004150 ORTHO05D005087 3.5e-103 379.4 345 56.2
Cpa.g.sc77.46 Carica papaya HOM05D004150 ORTHO05D005087 2.5e-101 373.2 197 85.3
Nitab4.5_0024430g0010 Nicotiana tabacum HOM05D004150 ORTHO05D005087 2.8e-100 369.8 200 85.0
AL1G61960 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 1.0e-94 351.3 235 68.1
SMO169G0186 Selaginella moellendorffii HOM05D004150 ORTHO05D005087 1.6e-87 327.4 199 71.9
Zm00001eb293260 Zea mays HOM05D004150 ORTHO05D005087 6.7e-86 322.0 361 49.9
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis HOM05D004150 ORTHO05D005087 4.4e-85 319.3 227 64.8
DCAR_013267 Daucus carota HOM05D004150 ORTHO05D005087 2.2e-84 317.0 215 67.0
Mapoly0001s0101 Marchantia polymorpha HOM05D004150 ORTHO05D005087 1.8e-83 313.9 470 41.5
Os06g0152800 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 5.9e-82 308.9 250 57.2
Zm00001eb271010 Zea mays HOM05D004150 ORTHO05D005087 1.8e-78 297.4 214 62.6
Pp3c9_8060 Physcomitrium patens HOM05D004150 ORTHO05D005087 1.3e-76 291.2 440 39.1
SEGI_28417 Sequoiadendron giganteum HOM05D004150 ORTHO05D005087 5.7e-69 265.8 383 39.7
Mapoly0030s0045 Marchantia polymorpha HOM05D004150 ORTHO05D005087 2.4e-67 260.4 431 40.1
Haze_09266 Corylus avellana HOM05D004150 ORTHO05D005087 1.2e-61 241.5 187 65.2
Gorai.001G168800 Gossypium raimondii HOM05D004150 ORTHO05D005087 6.0e-42 176.0 94 83.0
Gohir.D04G018433 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.3e-41 174.1 93 82.8
Gorai.010G164000 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.3e-41 174.1 94 81.9
Gohir.A11G228702 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.1e-40 171.8 94 81.9
QL08p025867 Quercus lobata HOM05D004150 ORTHO05D005087 4.3e-40 169.9 192 51.6
EL10Ac9g22809 Beta vulgaris HOM05D004150 ORTHO05D005087 1.6e-39 167.9 177 52.5
VMungo1309G1261 Vigna mungo HOM05D004150 ORTHO05D005087 8.9e-38 162.2 109 71.6
Actinidia33318 Actinidia chinensis HOM05D004150 ORTHO05D005087 3.4e-37 160.2 168 52.4
Gohir.A02G079101 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.4e-37 160.2 151 57.0
Haze_11864 Corylus avellana HOM05D004150 ORTHO05D005087 9.8e-37 158.7 140 59.3
AL1G62010 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 4.0e-30 136.7 119 61.3
Aqoxy1G01962 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 1.6e-26 124.8 136 54.4
Haze_09267 Corylus avellana HOM05D004150 ORTHO05D005087 2.7e-26 124.0 119 52.9
Haze_09268 Corylus avellana HOM05D004150 ORTHO05D005087 2.7e-26 124.0 119 52.9
Haze_09270 Corylus avellana HOM05D004150 ORTHO05D005087 2.7e-26 124.0 119 52.9
BolC5t30531H Brassica oleracea HOM05D004150 ORTHO05D032065 7.3e-24 115.9 165 43.0
VMungo0251G3124 Vigna mungo HOM05D004150 ORTHO05D005087 8.4e-20 102.4 72 69.4
ECA240G1314 Erigeron canadensis HOM05D000062 ORTHO05D000043 5.2e-14 83.2 45 82.2
CDE09G0238 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 2.1e-07 61.2 44 59.1


User provided reference genes

Program Settings