Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 3.7e-263 911.0 461 100.0
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 4.6e-253 877.5 464 97.0
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 8.7e-236 820.1 463 90.1
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 9.0e-233 810.1 465 88.6
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.6e-226 789.3 461 87.4
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.4e-225 785.4 462 85.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 1.3e-223 779.6 455 85.9
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.3e-223 779.6 454 86.6
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.7e-223 779.2 433 89.1
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 3.8e-223 778.1 427 90.6
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 6.4e-223 777.3 461 85.9
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.1e-222 776.5 431 90.7
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 5.5e-222 774.2 461 84.8
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 4.6e-221 771.2 439 88.6
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 4.6e-221 771.2 439 88.6
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 4.6e-221 771.2 461 83.9
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 6.0e-221 770.8 439 88.6
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.0e-220 770.0 427 88.8
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 3.9e-220 768.1 461 85.2
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 5.1e-220 767.7 427 88.5
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 5.1e-220 767.7 427 89.0
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 5.1e-220 767.7 461 83.7
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 6.7e-220 767.3 425 89.9
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 8.7e-220 766.9 438 88.1
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.1e-219 766.5 461 83.5
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 1.1e-219 766.5 429 88.3
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 2.5e-219 765.4 464 82.8
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 3.3e-219 765.0 461 83.9
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 5.6e-219 764.2 461 83.7
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 5.6e-219 764.2 426 88.0
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 9.6e-219 763.5 466 83.5
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 9.6e-219 763.5 453 84.5
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.6e-218 762.7 444 86.9
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 2.1e-218 762.3 427 88.1
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.8e-218 761.9 461 82.9
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 3.7e-218 761.5 427 88.3
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 1.1e-217 760.0 433 86.6
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.1e-217 760.0 462 83.1
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.1e-217 760.0 464 82.8
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 1.4e-217 759.6 433 86.4
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.8e-217 759.2 427 88.1
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 2.4e-217 758.8 427 88.3
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 4.0e-217 758.1 462 83.1
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 1.5e-216 756.1 427 88.3
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 4.5e-216 754.6 460 84.1
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 1.0e-215 753.4 434 87.1
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 1.7e-215 752.7 484 81.0
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 2.9e-215 751.9 427 86.9
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 3.8e-215 751.5 427 87.8
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 3.8e-215 751.5 466 83.5
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 8.4e-215 750.4 469 80.4
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 8.4e-215 750.4 427 87.8
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.1e-214 750.0 461 82.0
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 1.9e-214 749.2 464 82.8
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.5e-214 748.8 441 84.6
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 2.5e-214 748.8 428 85.5
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 5.5e-214 747.7 461 82.4
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 7.1e-214 747.3 421 87.2
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.6e-213 746.1 461 81.1
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 3.5e-213 745.0 415 88.2
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 3.5e-213 745.0 437 85.6
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 4.6e-213 744.6 429 86.0
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 4.6e-213 744.6 500 77.2
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 1.0e-212 743.4 465 81.9
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 1.8e-212 742.7 430 85.6
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.3e-212 742.3 429 85.8
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 2.3e-212 742.3 481 80.7
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 3.0e-212 741.9 436 85.1
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 3.0e-212 741.9 477 78.8
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 3.9e-212 741.5 429 85.5
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 6.7e-212 740.7 429 85.5
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-211 740.0 430 85.3
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.1e-211 740.0 430 85.3
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.5e-211 739.6 405 90.9
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.5e-211 739.6 405 90.9
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.5e-211 739.6 444 83.8
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.9e-211 739.2 430 85.3
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.9e-211 739.2 430 85.3
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 3.3e-211 738.4 436 84.2
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 3.3e-211 738.4 436 84.2
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 4.3e-211 738.0 417 88.0
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 4.3e-211 738.0 440 82.7
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 5.7e-211 737.6 448 84.4
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 9.6e-211 736.9 428 84.8
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 2.8e-210 735.3 463 82.5
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 1.8e-209 732.6 429 84.4
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 4.1e-209 731.5 462 79.7
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.2e-208 729.9 462 79.4
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 2.6e-208 728.8 462 79.4
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 2.6e-208 728.8 438 84.5
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.7e-207 726.1 461 79.6
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.8e-207 724.9 434 83.6
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 5.0e-207 724.5 419 83.5
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.1e-206 723.4 465 79.6
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.9e-206 722.6 465 79.6
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 1.9e-206 722.6 460 78.3
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 3.5e-205 718.4 431 81.9
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.1e-203 713.4 391 90.3
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 3.3e-203 711.8 483 77.4
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 2.8e-194 682.2 465 77.2
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.1e-193 680.2 383 88.0
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 7.7e-192 674.1 383 86.9
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 2.9e-191 672.2 402 86.1
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.9e-190 669.5 463 76.7
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 2.1e-189 666.0 495 71.5
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 1.0e-188 663.7 454 76.2
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 1.1e-187 660.2 448 75.2
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 5.7e-187 657.9 445 76.6
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.4e-185 652.5 435 77.5
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 7.0e-185 651.0 426 78.6
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 9.1e-185 650.6 450 75.3
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 3.8e-183 645.2 414 78.7
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 2.6e-179 632.5 462 73.4
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 2.8e-178 629.0 411 75.4
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.6e-176 623.2 413 75.3
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 3.8e-175 618.6 443 70.7
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 8.8e-172 607.4 410 73.4
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 9.1e-169 597.4 492 67.5
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 2.5e-166 589.3 425 72.7
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 2.7e-165 585.9 588 58.7
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 7.5e-147 524.6 335 80.6
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 2.0e-144 516.5 429 59.4
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 3.9e-143 512.3 330 77.9
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 8.9e-132 474.6 411 58.2
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.1e-121 441.0 369 60.7
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-120 437.6 380 60.5
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.6e-112 409.1 241 85.1
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.3e-111 406.8 261 77.0
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 5.3e-108 395.6 459 47.9
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 4.5e-107 392.5 435 52.0
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 3.8e-82 309.7 173 89.6
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.6e-80 304.3 188 82.4
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 8.8e-79 298.5 273 59.7
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 1.3e-77 294.7 409 41.6
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 4.5e-59 233.0 358 40.5
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 4.5e-59 233.0 173 68.2
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.5e-46 191.4 117 81.2
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.7e-45 188.0 426 32.6
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.8e-31 141.4 72 91.7
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 2.6e-30 137.5 83 78.3
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 7.0e-28 129.4 68 88.2
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 7.8e-27 125.9 81 82.7
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 9.9e-22 109.0 76 73.7
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 9.9e-22 109.0 76 73.7
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 5.4e-20 103.2 66 83.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 8.6e-18 95.9 296 28.7
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 1.8e-15 88.2 61 70.5
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 2.6e-14 84.3 59 74.6
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 4.3e-09 67.0 50 62.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 2.1e-08 64.7 68 51.5
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 2.1e-08 64.7 68 51.5
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 7.6e-06 56.2 78 46.2


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