Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 5.4e-82 307.8 172 100.0
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 5.4e-82 307.8 172 100.0
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 5.4e-82 307.8 172 100.0
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.2e-42 175.3 173 57.2
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.1e-41 172.9 173 56.6
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 7.9e-41 171.0 171 66.1
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 8.2e-38 161.0 176 60.2
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.0e-36 156.4 173 56.6
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 2.0e-36 156.4 174 55.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 5.8e-36 154.8 177 63.3
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 7.6e-36 154.5 170 57.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.3e-35 153.7 175 65.7
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.3e-35 153.7 177 54.8
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.3e-35 153.7 170 58.8
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.8e-35 152.1 175 52.6
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 2.5e-34 149.4 170 52.4
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 1.2e-33 147.1 176 51.7
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 3.5e-33 145.6 166 53.6
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.5e-33 145.6 178 51.1
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 4.6e-33 145.2 176 54.5
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.0e-32 144.1 178 51.1
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.8e-32 143.3 175 50.9
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.8e-32 143.3 175 50.9
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 3.9e-32 142.1 174 52.9
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.9e-31 139.8 177 49.7
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.9e-31 139.8 164 52.4
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 9.7e-31 137.5 171 50.3
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.6e-30 136.7 178 53.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.1e-29 134.0 147 56.5
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 6.9e-29 131.3 134 51.5
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.5e-28 130.2 178 50.0
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 7.6e-28 127.9 177 46.3
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.7e-27 126.7 134 50.0
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 6.5e-27 124.8 177 50.3
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 6.5e-27 124.8 192 46.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 8.5e-27 124.4 175 49.7
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 3.2e-26 122.5 170 48.2
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 4.2e-26 122.1 167 51.5
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.2e-26 122.1 189 47.6
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 5.5e-26 121.7 181 48.6
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 9.3e-26 120.9 171 55.0
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 9.3e-26 120.9 141 55.3
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 9.3e-26 120.9 198 43.4
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.2e-25 120.6 106 61.3
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.2e-25 120.6 179 48.6
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.6e-25 120.2 174 53.4
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.1e-25 119.8 170 47.6
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.6e-25 119.0 173 46.8
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 4.6e-25 118.6 176 51.7
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 4.6e-25 118.6 173 47.4
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 6.1e-25 118.2 178 51.1
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 7.9e-25 117.9 177 54.2
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.0e-24 117.5 169 48.5
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.3e-24 117.1 181 47.5
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.0e-24 115.9 177 46.9
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 3.9e-24 115.5 172 51.2
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 3.9e-24 115.5 177 46.9
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 5.1e-24 115.2 176 50.6
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 5.1e-24 115.2 185 48.6
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 6.7e-24 114.8 188 46.3
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 6.7e-24 114.8 145 46.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 6.7e-24 114.8 176 46.6
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 8.7e-24 114.4 183 47.0
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.5e-23 112.8 171 46.2
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 4.3e-23 112.1 173 52.6
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 5.7e-23 111.7 166 53.0
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 7.4e-23 111.3 174 47.1
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 9.7e-23 110.9 171 45.6
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 9.7e-23 110.9 171 45.6
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 3.7e-22 109.0 179 46.4
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 4.8e-22 108.6 173 46.8
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.4e-21 107.1 183 42.1
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.1e-21 105.9 174 48.9
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 6.9e-21 104.8 109 59.6
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 6.9e-21 104.8 147 54.4
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.2e-20 104.0 174 44.3
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 2.0e-20 103.2 162 43.2
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.0e-20 103.2 115 53.0
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 3.4e-20 102.4 173 43.9
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 3.4e-20 102.4 175 45.1
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.0e-19 100.9 174 43.1
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 1.3e-19 100.5 124 53.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.3e-19 100.5 113 54.0
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.7e-19 100.1 144 49.3
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.8e-19 99.0 169 47.9
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 6.5e-19 98.2 143 47.6
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.1e-18 97.4 175 45.7
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.1e-18 97.4 173 47.4
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.4e-18 97.1 173 43.4
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 1.2e-17 94.0 127 54.3
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.2e-17 94.0 193 42.5
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 2.1e-17 93.2 160 46.9
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 3.6e-17 92.4 201 36.8
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 6.1e-17 91.7 143 46.2
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 7.9e-17 91.3 179 39.1
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 1.8e-16 90.1 183 47.0
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 2.3e-16 89.7 187 39.0
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.5e-15 87.0 179 37.4
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 1.8e-13 80.1 184 45.7
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.3e-11 73.9 181 41.4
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 3.8e-11 72.4 175 37.1
TWI31G0635 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 2.5e-10 69.7 141 39.0
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 7.2e-10 68.2 76 48.7
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 6.7e-08 61.6 70 45.7


User provided reference genes

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