Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 3.3e-245 851.3 436 100.0
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 6.4e-156 554.7 409 71.9
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 3.6e-151 538.9 404 68.6
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 3.0e-145 519.2 407 68.1
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.1e-139 498.0 361 73.7
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.7e-138 496.1 408 63.0
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 2.5e-136 489.6 425 61.9
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.1e-135 486.5 361 70.6
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 1.4e-131 473.8 410 62.4
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 7.9e-130 468.0 412 61.4
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.5e-128 463.8 407 59.2
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 2.2e-127 459.9 418 60.8
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 4.2e-123 445.7 417 58.0
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.7e-122 443.0 413 57.9
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 4.6e-122 442.2 415 59.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 5.1e-121 438.7 419 60.4
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 6.9e-118 428.3 418 56.7
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 2.0e-117 426.8 407 58.5
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 2.6e-117 426.4 406 56.7
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 7.7e-117 424.9 413 57.4
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 8.5e-116 421.4 411 57.9
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 1.1e-115 421.0 420 56.4
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.9e-115 420.2 407 57.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.9e-115 420.2 407 57.7
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.0e-113 414.5 407 57.0
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.3e-113 413.3 359 59.9
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 5.1e-113 412.1 325 64.9
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.7e-113 411.8 410 55.4
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 8.8e-113 411.4 420 55.7
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.5e-112 410.6 391 57.8
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 4.4e-112 409.1 407 57.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 9.7e-112 407.9 358 58.4
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 9.7e-112 407.9 409 54.8
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.3e-111 407.5 413 55.2
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.3e-111 407.5 419 55.8
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.3e-111 407.5 419 55.8
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.7e-111 407.1 414 55.1
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 2.8e-111 406.4 409 54.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 3.7e-111 406.0 409 54.8
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.8e-110 403.7 410 55.1
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.1e-110 402.9 407 56.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.7e-108 397.1 421 52.3
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.9e-108 396.4 410 57.8
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 5.5e-107 392.1 415 53.5
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 7.2e-107 391.7 413 55.2
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 7.2e-107 391.7 409 54.0
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 9.4e-107 391.3 412 53.9
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 2.7e-106 389.8 388 57.5
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 6.1e-106 388.7 411 53.8
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 2.3e-105 386.7 412 53.2
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 5.2e-105 385.6 404 53.2
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-104 383.6 405 53.1
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 3.3e-104 382.9 416 51.4
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 4.4e-104 382.5 420 52.1
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 7.4e-104 381.7 409 51.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 7.4e-104 381.7 405 53.3
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 2.8e-103 379.8 392 52.8
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 2.8e-103 379.8 405 53.6
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 6.3e-103 378.6 396 53.8
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 9.1e-102 374.8 414 50.7
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.2e-101 374.4 414 50.7
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 5.9e-101 372.1 354 53.4
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 7.7e-101 371.7 406 52.7
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.0e-100 371.3 361 56.0
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.9e-99 367.1 415 50.6
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.8e-97 360.5 361 54.0
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 5.2e-97 359.0 405 49.9
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 7.5e-96 355.1 405 50.6
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.3e-95 354.4 355 55.5
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 3.7e-95 352.8 319 58.3
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.1e-94 349.7 309 64.1
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.6e-93 347.4 397 50.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-92 344.4 373 51.7
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 4.2e-91 339.3 410 50.0
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.6e-90 337.4 312 59.3
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 2.1e-90 337.0 384 52.1
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.0e-89 334.7 414 49.0
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 5.2e-89 332.4 322 57.1
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 2.8e-87 326.6 380 51.3
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 8.3e-87 325.1 386 50.5
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-86 324.3 368 51.9
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.1e-86 323.2 377 50.4
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 5.4e-86 322.4 368 51.9
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.0e-84 318.2 378 50.0
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.0e-84 318.2 378 50.0
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.9e-84 316.6 378 51.3
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.5e-83 313.5 237 73.0
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.5e-83 313.5 237 73.0
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 2.5e-83 313.5 361 50.1
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.1e-82 310.5 381 50.7
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.6e-80 303.5 365 49.6
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 2.2e-79 300.4 279 54.8
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.1e-78 298.1 419 44.6
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 2.4e-78 297.0 236 68.6
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 1.7e-71 274.2 368 44.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 5.0e-68 262.7 300 51.7
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 4.7e-66 256.1 301 51.8
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.2e-64 251.5 392 39.3
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.7e-60 237.7 273 47.6
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 3.9e-60 236.5 385 41.0
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 2.0e-56 224.2 369 41.5
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.9e-55 219.5 233 56.7
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.9e-48 195.3 126 76.2
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.9e-48 195.3 126 76.2
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.2e-40 171.8 370 35.1
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-40 171.4 116 72.4
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 7.1e-38 162.5 230 43.5
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.9e-35 154.5 150 53.3
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.2e-31 141.0 174 51.1
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 4.2e-30 136.7 157 51.6
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 1.3e-28 131.7 394 29.2
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 9.6e-27 125.6 200 42.5
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 5.8e-24 116.3 156 42.9
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 7.1e-22 109.4 122 49.2
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.2e-21 108.6 333 29.4
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 7.9e-21 105.9 315 29.8
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 5.5e-06 56.6 127 37.0


User provided reference genes

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