Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 8.3e-188 660.2 333 100.0
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.4e-139 500.0 325 78.8
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 1.0e-137 493.8 327 77.1
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.3e-137 493.4 328 78.0
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 3.3e-136 488.8 329 76.0
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 1.7e-132 476.5 312 76.6
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 2.2e-132 476.1 329 74.5
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 3.8e-132 475.3 331 75.2
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.1e-131 473.8 330 75.2
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 5.5e-131 471.5 324 74.1
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 4.6e-130 468.4 315 75.2
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 1.0e-129 467.2 334 75.1
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 1.8e-129 466.5 330 72.4
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 3.0e-129 465.7 329 72.0
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 3.0e-129 465.7 326 72.4
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 8.7e-129 464.2 315 74.6
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.9e-128 463.0 324 72.8
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 5.6e-128 461.5 316 75.3
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 5.6e-128 461.5 331 72.2
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 7.4e-128 461.1 360 69.2
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 1.6e-127 459.9 329 71.7
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 2.1e-127 459.5 331 71.0
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.1e-127 459.5 352 68.5
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 4.8e-127 458.4 330 71.2
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 8.2e-127 457.6 329 71.7
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 2.4e-126 456.1 316 73.4
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 3.1e-126 455.7 315 74.0
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 3.1e-126 455.7 325 71.4
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 9.0e-126 454.1 324 71.9
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 1.5e-125 453.4 313 75.1
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 4.5e-125 451.8 318 72.3
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 5.8e-125 451.4 312 75.0
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.0e-124 450.7 324 71.6
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 1.7e-124 449.9 318 72.0
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 2.2e-124 449.5 320 71.2
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 2.2e-124 449.5 324 71.6
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 4.9e-124 448.4 329 70.2
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 6.5e-124 448.0 328 71.0
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 1.9e-123 446.4 328 70.7
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 3.2e-123 445.7 333 69.4
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 3.2e-123 445.7 312 73.7
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 9.3e-123 444.1 329 69.9
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.3e-121 440.3 328 68.6
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 1.3e-121 440.3 328 69.5
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 2.3e-121 439.5 315 71.4
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 3.0e-121 439.1 339 67.6
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 3.9e-121 438.7 316 70.3
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 6.7e-121 438.0 328 67.7
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 8.7e-121 437.6 323 69.0
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 4.3e-120 435.3 316 70.6
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 4.3e-120 435.3 328 66.8
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 4.3e-120 435.3 316 70.3
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 5.7e-120 434.9 392 61.2
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 7.4e-120 434.5 325 66.8
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 1.6e-119 433.3 317 71.6
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 2.2e-119 433.0 351 65.2
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 2.2e-119 433.0 328 68.3
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 2.8e-119 432.6 316 69.6
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 2.8e-119 432.6 328 66.2
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 2.8e-119 432.6 325 66.2
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 4.8e-119 431.8 328 65.9
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 4.8e-119 431.8 331 65.3
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 6.3e-119 431.4 323 69.3
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 1.4e-118 430.3 323 66.6
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 1.8e-118 429.9 328 67.7
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 1.8e-118 429.9 327 66.7
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 1.8e-118 429.9 327 67.6
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 2.4e-118 429.5 352 66.2
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 6.9e-118 427.9 328 68.0
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.5e-117 426.8 352 65.3
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 4.5e-117 425.2 328 68.3
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 5.9e-117 424.9 328 66.2
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 5.9e-117 424.9 325 65.8
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 5.0e-116 421.8 326 68.4
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 5.0e-116 421.8 327 66.4
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.1e-115 420.6 327 67.9
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.4e-115 420.2 368 61.1
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 3.2e-115 419.1 333 67.3
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 4.2e-115 418.7 312 70.2
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 1.6e-114 416.8 274 77.4
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 7.9e-114 414.5 327 64.5
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 1.8e-113 413.3 313 67.7
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.5e-112 410.2 330 66.4
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 1.5e-112 410.2 309 69.6
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.0e-112 409.8 351 60.7
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 3.3e-112 409.1 312 67.6
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 4.3e-112 408.7 312 65.7
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 4.3e-112 408.7 281 75.4
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 9.7e-112 407.5 312 66.0
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 6.3e-111 404.8 312 66.7
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 1.4e-110 403.7 312 66.0
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 5.3e-110 401.7 312 66.3
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 1.5e-109 400.2 312 66.0
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 2.0e-109 399.8 278 73.0
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 5.9e-109 398.3 296 68.6
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.0e-108 397.5 277 72.9
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 1.7e-108 396.7 317 65.0
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 1.7e-108 396.7 280 71.8
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 5.0e-108 395.2 280 71.4
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 1.1e-107 394.0 338 61.5
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 2.5e-107 392.9 287 70.7
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 7.2e-107 391.3 311 65.6
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 4.7e-106 388.7 310 64.5
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 1.0e-105 387.5 267 74.2
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 1.4e-105 387.1 312 63.8
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 2.3e-105 386.3 310 63.9
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 4.4e-104 382.1 325 61.5
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.7e-103 380.2 328 64.0
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 3.7e-103 379.0 320 65.3
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 4.8e-103 378.6 328 60.7
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 1.1e-102 377.5 329 61.7
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 1.1e-99 367.5 327 59.0
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.9e-99 366.7 307 61.6
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 7.2e-99 364.8 251 71.3
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 3.6e-98 362.5 259 71.4
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.0e-98 361.3 327 59.9
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 2.3e-97 359.8 313 59.7
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 8.8e-97 357.8 307 58.0
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 4.4e-96 355.5 314 60.2
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 9.7e-96 354.4 308 59.7
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 9.1e-94 347.8 310 60.0
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 1.9e-91 340.1 231 74.0
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 5.7e-88 328.6 315 54.9
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 3.7e-87 325.9 461 45.6
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 1.8e-86 323.6 315 58.1
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 2.5e-83 313.2 312 55.4
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 5.9e-77 292.0 229 63.3
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 4.2e-75 285.8 182 80.8
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 5.2e-73 278.9 205 68.8
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.8e-70 270.4 213 67.6
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 4.5e-69 265.8 174 78.7
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 1.9e-67 260.4 183 71.6
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 3.6e-66 256.1 309 50.2
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 2.0e-64 250.4 187 67.4
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 2.9e-63 246.5 214 63.6
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 2.7e-61 240.0 350 42.3
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 2.3e-60 236.9 172 70.9
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 8.6e-60 235.0 185 65.9
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.5e-59 234.2 252 54.0
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 4.3e-59 232.6 148 75.0
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 1.2e-58 231.1 222 53.2
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 3.6e-58 229.6 160 73.1
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 1.4e-57 227.6 202 58.4
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 6.4e-55 218.8 148 75.7
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.9e-54 217.2 272 50.0
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 1.2e-53 214.5 313 42.8
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 7.8e-53 211.8 182 63.2
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 3.3e-51 206.5 289 43.9
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 5.6e-51 205.7 197 57.4
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 2.8e-50 203.4 132 75.8
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.8e-49 200.7 222 50.9
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 6.0e-45 185.7 141 68.1
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 1.1e-41 174.9 315 41.3
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.2e-40 171.4 149 60.4
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 8.4e-39 165.2 123 68.3
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 3.2e-38 163.3 121 68.6
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.9e-36 156.4 177 50.8
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 1.6e-34 151.0 106 73.6
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 4.4e-32 142.9 175 43.4
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.3e-28 131.3 141 51.8
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 2.6e-24 117.1 113 55.8
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 1.9e-22 110.9 84 63.1
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 2.7e-21 107.1 120 54.2
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 3.0e-20 103.6 131 45.0
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 1.3e-18 98.2 84 58.3
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 1.3e-15 88.2 89 55.1
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 2.2e-15 87.4 65 66.2
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 3.5e-13 80.1 66 62.1
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 3.5e-13 80.1 66 60.6
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 6.7e-12 75.9 86 46.5
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.1e-11 75.1 44 84.1
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-11 75.1 91 46.2
arahy.Tifrunner.gnm1.ann1.YUT84C Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-06 58.5 40 70.0
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 1.4e-06 58.2 54 55.6


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