Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12440 Davidia involucrata HOM05D009910 ORTHO05D011288 1.3e-50 203.4 151 100.0
Duzib168G1622 Durio zibethinus HOM05D009910 ORTHO05D011288 6.1e-13 78.2 63 66.7
CiPaw.16G026700 Carya illinoinensis HOM05D009910 ORTHO05D011288 5.2e-12 75.1 60 61.7
Actinidia03313 Actinidia chinensis HOM05D035583 ORTHO05D030831 2.0e-11 73.2 134 70.9
TAR626G0854 Trochodendron aralioides HOM05D009910 ORTHO05D011288 7.5e-11 71.2 43 74.4
Cfa017980 Carpinus fangiana HOM05D009910 ORTHO05D011288 1.3e-10 70.5 55 63.6
Thecc.09G057800 Theobroma cacao HOM05D009910 ORTHO05D011288 1.7e-10 70.1 49 71.4
TAR636G3469 Trochodendron aralioides HOM05D009910 ORTHO05D029020 3.7e-10 68.9 126 52.4
Haze_18151 Corylus avellana HOM05D001920 ORTHO05D005408 4.8e-10 68.6 55 63.6
QL02p000667 Quercus lobata HOM05D000163 ORTHO05D000219 1.8e-09 66.6 55 60.0
Nn6g35541 Nelumbo nucifera HOM05D009910 ORTHO05D011288 9.1e-09 64.3 43 65.1
Manes.03G050300 Manihot esculenta HOM05D009910 ORTHO05D011288 1.2e-08 63.9 62 53.2
CSS0017385 Camellia sinensis var. sinensis HOM05D035583 ORTHO05D030831 2.0e-08 63.2 121 70.2
CSS0021186 Camellia sinensis var. sinensis HOM05D035583 ORTHO05D030831 2.0e-08 63.2 121 70.2
COL.COLO4_21095 Corchorus olitorius HOM05D009910 ORTHO05D011288 3.5e-08 62.4 50 64.0
Gohir.A07G021400 Gossypium hirsutum HOM05D009910 ORTHO05D011288 1.3e-07 60.5 59 55.9
Gohir.D07G021200 Gossypium hirsutum HOM05D009910 ORTHO05D011288 1.7e-07 60.1 66 50.0
Gorai.001G021900 Gossypium raimondii HOM05D009910 ORTHO05D011288 1.7e-07 60.1 66 50.0
RcHm_v2.0_Chr6g0311291 Rosa chinensis HOM05D009910 ORTHO05D011288 1.7e-07 60.1 49 59.2
FAN20G0594 Fragaria x ananassa HOM05D001920 ORTHO05D005408 2.9e-07 59.3 64 50.0
Potri.006G225400 Populus trichocarpa HOM05D009910 ORTHO05D011288 2.9e-07 59.3 56 58.9
Gohir.A05G040600 Gossypium hirsutum HOM05D009910 ORTHO05D011288 5.0e-07 58.5 42 59.5
Gohir.D05G042100 Gossypium hirsutum HOM05D009910 ORTHO05D011288 5.0e-07 58.5 42 59.5
Gorai.009G042900 Gossypium raimondii HOM05D009910 ORTHO05D011288 5.0e-07 58.5 42 59.5
TWI32G1154 Tripterygium wilfordii HOM05D009910 ORTHO05D011288 8.5e-07 57.8 53 56.6
Prupe.1G408700 Prunus persica HOM05D009910 ORTHO05D011288 2.5e-06 56.2 60 48.3
TWI34G0374 Tripterygium wilfordii HOM05D009910 ORTHO05D011288 2.5e-06 56.2 55 56.4


User provided reference genes

Program Settings